HELP     Sign In
Search

Relevance to Autism

Recurrent mutations in the DYRK1A gene have been identified in multiple individuals with ASD as described below. A total of four de novo LoF variants in the DYRK1A gene were identified in ASD probands from the Simons Simplex Collection (PMIDs 22495309, 22542183, 23160955, 25363768). Analysis of rare coding variation in 3,871 ASD cases and 9,937 ancestry-matched or paternal controls from the Autism Sequencing Consortium (ASC) in De Rubeis et al., 2014 identified DYRK1A as a gene meeting high statistical significance with a FDR 0.01, meaning that this gene had a 99% chance of being a true autism gene (PMID 25363760). This gene was identified in Iossifov et al. 2015 as a strong candidate to be an ASD risk gene based on a combination of de novo mutational evidence and the absence or very low frequency of mutations in controls (PMID 26401017). Resequencing of the DYRK1A gene in 4716 new cases with DD/ID or ASD in van Bon et al., 2016 identified five novel truncating variants, three of which were confirmed de novo and were observed in cases with ASD and intellectual disability; no truncating variants in DYRK1A were observed in 6503 individuals from NHLBI or in 2193 unaffected SSC siblings (PMID 25707398). Furthermore, phenotypic comparison of 15 cases with DYRK1A disruptions in this report identified a syndromic disorder characterized by ASD, intellectual disability, microcephaly and other shared phenotypes. Evers et al., 2017 reported additional de novo DYRK1A variants identified in individuals from the Deciphering Developmental Disorders study presenting with intellectual disability and other features (PMID 28053047). A two-stage analysis of rare de novo and inherited coding variants in 42,607 ASD cases, including 35,130 new cases from the SPARK cohort, in Zhou et al., 2022 identified DYRK1A as a gene reaching exome-wide significance (P < 2.5E-06).

Molecular Function

This gene encodes a member of the Dual-specificity tyrosine phosphorylation-regulated kinase (DYRK) family. It may play a significant role in a signaling pathway regulating cell proliferation and may be involved in brain development. It is localized in the Down syndrome critical region of chromosome 21, and is considered to be a strong candidate gene for learning defects associated with Down syndrome. Defects in DYRK1A are the cause of mental retardation autosomal dominant type 7 (MRD7) [MIM:614104].

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.
ASD
Support
De novo genic mutations among a Chinese autism spectrum disorder cohort.
ASD
Support
Full-length isoform transcriptome of the developing human brain provides further insights into autism
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
Autosomal dominant intellectual developmental diso
Support
Targeted sequencing identifies 91 neurodevelopmental-disorder risk genes with autism and developmental-disability biases.
ASD, DD
Support
Comprehensive genome sequencing analyses identify novel gene mutations and copy number variations associated with infant developmental delay or intellectual disability (DD/ID)
DD, ID, epilepsy/seizures
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
A novel de novo heterozygous DYRK1A mutation causes complete loss of DYRK1A function and developmental delay
Autosomal dominant mental retardation-7
DD, epilepsy/seizures
Support
Impaired development of neocortical circuits contributes to the neurological alterations in DYRK1A haploinsufficiency syndrome.
ASD, DD, ID
Support
Autosomal dominant intellectual developmental diso
Autistic behavior
Support
High diagnostic yield of syndromic intellectual disability by targeted next-generation sequencing.
ID
Support
Exome Sequencing in 200 Intellectual Disability/Autistic Patients: New Candidates and Atypical Presentations
ID
Epilepsy/seizures, stereotypy
Support
DYRK1A-related intellectual disability: a syndrome associated with congenital anomalies of the kidney and urinary tract.
DD, ID
ASD, epilepsy/seizures, microcephaly
Support
ASD, ID
Support
Autism-associated Dyrk1a truncation mutants impair neuronal dendritic and spine growth and interfere with postnatal cortical development.
ASD, DD, ID
Support
Neurocognitive and neurobehavioral characterization of two frequent forms of neurodevelopmental disorders: the DYRK1A and the Wiedemann-Steiner syndromes
Autosomal dominant intellectual developmental diso
ASD
Support
Efficient strategy for the molecular diagnosis of intellectual disability using targeted high-throughput sequencing.
ID
Support
The neurodevelopmental disorder risk gene DYRK1A is required for ciliogenesis and control of brain size in Xenopus embryos
Support
Inherited and multiple de novo mutations in autism/developmental delay risk genes suggest a multifactorial model.
ASD
Support
Case report of novel DYRK1A mutations in 2 individuals with syndromic intellectual disability and a review of the literature.
DD, ID
Epilepsy/seizures
Support
Clinical course of epilepsy and white matter abnormality linked to a novel DYRK1A variant
Autosomal dominant mental retardation-7
ASD, DD, epilepsy/seizures
Support
Characterization of intellectual disability and autism comorbidity through gene panel sequencing.
ID, ASD or autistic traits
Support
Autosomal dominant intellectual developmental diso
Support
Diagnostic Yield and Novel Candidate Genes by Exome Sequencing in 152 Consanguineous Families With Neurodevelopmental Disorders.
ID, epilepsy/seizures, microcephaly
Support
Impaired Neurodevelopmental Genes in Slovenian Autistic Children Elucidate the Comorbidity of Autism With Other Developmental Disorders
ASD
DD, ID, epilepsy/seizures
Support
Multiplex targeted sequencing identifies recurrently mutated genes in autism spectrum disorders.
ASD
Support
Genetic landscape of autism spectrum disorder in Vietnamese children
ASD
Support
Clinical phenotype of ASD-associated DYRK1A haploinsufficiency.
DD, ID
ASD
Support
Autosomal dominant intellectual developmental diso
Support
Whole-exome sequencing is a powerful approach for establishing the etiological diagnosis in patients with intellectual disability and microcephaly.
DD
Microcephaly
Support
Comorbidities associated with genetic abnormalities in children with intellectual disability
ASD, DD/ID
Support
Lessons Learned from Large-Scale, First-Tier Clinical Exome Sequencing in a Highly Consanguineous Population.
ASD, DD, ID, epilepsy/seizures
Support
ID, epilepsy/seizures
Support
Structural analysis of pathogenic mutations in the DYRK1A gene in patients with developmental disorders.
DD, microcephaly
Support
Clinical Targeted Panel Sequencing Analysis in Clinical Evaluation of Children with Autism Spectrum Disorder in China
ASD
Support
De novo gene disruptions in children on the autistic spectrum.
ASD
Support
Rare genetic susceptibility variants assessment in autism spectrum disorder: detection rate and practical use.
ASD
Support
Targeted sequencing and functional analysis reveal brain-size-related genes and their networks in autism spectrum disorders.
ASD
Support
Impaired macroglial development and axonal conductivity contributes to the neuropathology of DYRK1A-related intellectual disability syndrome
Support
Gene Mutation Analysis in 253 Chinese Children with Unexplained Epilepsy and Intellectual/Developmental Disabilities.
DD, ID, epilepsy/seizures
Support
Genetic and phenotypic analysis of 101 patients with developmental delay or intellectual disability using whole-exome sequencing
DD, epilepsy/seizures
Support
The Body Size of Stimulus Conspecifics Affects Social Preference in a Binary Choice Task in Wild-Type, But Not in dyrk1aa Mutant, Zebrafish.
Support
ASD
Support
Clinical exome sequencing: results from 2819 samples reflecting 1000 families.
Mental retardation, autosomal dominant 7
DD, ID, epilepsy/seizures
Support
Genetic care in geographically isolated small island communities: 8 years of experience in the Dutch Caribbean
ID, epilepsy/seizures
Support
Intragenic deletion in DYRK1A leads to mental retardation and primary microcephaly.
ID
Autistic features
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
ID
Support
Genomic diagnosis for children with intellectual disability and/or developmental delay.
ID, epilepsy/seizures
Support
Integrating de novo and inherited variants in 42
ASD
Support
DYRK1A mutations in two unrelated patients.
DD, epilepsy/seizures
Autistic features
Support
Ocular Phenotype Associated with DYRK1A Variants
Autosomal dominant mental retardation-7
DD, ID, epilepsy/seizures
Support
Neurological Diseases With Autism Spectrum Disorder: Role of ASD Risk Genes.
ASD
ID
Support
DD, epilepsy/seizures
Support
The genomic landscape of balanced cytogenetic abnormalities associated with human congenital anomalies.
Microcephaly, motor delay, speech delay
Autistic features
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Support
Truncation of the Down syndrome candidate gene DYRK1A in two unrelated patients with microcephaly.
DD
Epilepsy, MR
Support
Autism risk in offspring can be assessed through quantification of male sperm mosaicism.
ASD
Support
Autosomal dominant intellectual developmental diso
Stereotypy
Support
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Support
Complex Diagnostics of Non-Specific Intellectual Developmental Disorder
DD, ID
Epilepsy/seizures
Support
Large-scale discovery of novel genetic causes of developmental disorders.
ASD, DD, epilepsy
Microcephaly
Support
Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders
ASD, DD
ID
Support
Elucidation of the phenotypic spectrum and genetic landscape in primary and secondary microcephaly.
Microcephaly
DD, epilepsy/seizures
Recent Recommendation
Characterization of phenotypic range in DYRK1A haploinsufficiency syndrome using standardized behavioral measures
DD
ASD, epilepsy/seizures
Recent Recommendation
Disruptive de novo mutations of DYRK1A lead to a syndromic form of autism and ID.
ASD, ID
Epilepsy/seizures, microcephaly
Recent Recommendation
Integrative approach to interpret DYRK1A variants, leading to a frequent neurodevelopmental disorder
DD, ID, epilepsy/seizures
ASD, stereotypy
Recent Recommendation
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Recent Recommendation
Functional characterization of DYRK1A missense variants associated with a syndromic form of intellectual deficiency and autism.
Recent Recommendation
DYRK1A promotes dopaminergic neuron survival in the developing brain and in a mouse model of Parkinson's disease.
Recent Recommendation
Phosphorylation of -Tubulin by the Down Syndrome Kinase, Minibrain/DYRK1a, Regulates Microtubule Dynamics and Dendrite Morphogenesis.
Recent Recommendation
The DYRK1A gene is a cause of syndromic intellectual disability with severe microcephaly and epilepsy.
ID
Epilepsy
Recent Recommendation
Low load for disruptive mutations in autism genes and their biased transmission.
ASD
Recent Recommendation
ASD
Recent Recommendation
DYRK1A haploinsufficiency causes a new recognizable syndrome with microcephaly, intellectual disability, speech impairment, and distinct facies.
DD, ID, microcephaly
ASD, epilepsy/seizures
Recent Recommendation
ASD
Recent Recommendation
Ten new cases further delineate the syndromic intellectual disability phenotype caused by mutations in DYRK1A.
ID, ASD, epilepsy/seizures
Microcephaly

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN367R001 
 splice_site_variant 
 c.1071+1G>A 
  
 De novo 
  
 Simplex 
 GEN367R002 
 frameshift_variant 
 c.1464del 
 p.Ala489ProfsTer94 
 De novo 
  
 Simplex 
 GEN367R003 
 translocation 
  
  
 De novo 
  
 Simplex 
 GEN367R004 
 translocation 
  
  
 De novo 
  
 Simplex 
 GEN367R005 
 copy_number_loss 
  
  
 De novo 
  
  
 GEN367R006 
 frameshift_variant 
 c.263_264del 
 p.Ser88CysfsTer2 
 De novo 
  
  
 GEN367R007 
 frameshift_variant 
 c.143_144del 
 p.Ile48LysfsTer2 
 De novo 
  
 Simplex 
 GEN367R008 
 intron_variant 
 c.1644+133T>G 
  
 Familial 
 Paternal 
 Simplex 
 GEN367R009 
 frameshift_variant 
 c.1519+1del 
  
 De novo 
  
 Simplex 
 GEN367R010 
 stop_gained 
 c.1282C>T 
 p.Arg428Ter 
 De novo 
  
 Simplex 
 GEN367R011 
 missense_variant 
 c.473A>G 
 p.Lys158Arg 
 Unknown 
  
 Unknown 
 GEN367R012 
 missense_variant 
 c.1541G>A 
 p.Ser514Asn 
 Unknown 
  
 Unknown 
 GEN367R013 
 frameshift_variant 
 c.236del 
 p.Pro79GlnfsTer6 
 De novo 
  
 Simplex 
 GEN367R014 
 missense_variant 
 c.860A>T 
 p.Asp287Val 
 De novo 
  
 Simplex 
 GEN367R015 
 missense_variant 
 c.620T>C 
 p.Leu207Pro 
 De novo 
  
 Simplex 
 GEN367R016 
 missense_variant 
 c.1036T>C 
 p.Ser346Pro 
 De novo 
  
 Simplex 
 GEN367R017 
 frameshift_variant 
 c.366_367dup 
 p.Glu123GlyfsTer19 
 De novo 
  
 Simplex 
 GEN367R018 
 stop_gained 
 c.664C>T 
 p.Arg222Ter 
 De novo 
  
 Simplex 
 GEN367R019 
 splice_site_variant 
 TTTCTCTT>TTT 
  
 De novo 
  
  
 GEN367R020 
 stop_gained 
 c.613C>T 
 p.Arg205Ter 
 De novo 
  
  
 GEN367R021 
 missense_variant 
 c.932C>T 
 p.Ser311Phe 
 De novo 
  
  
 GEN367R022 
 stop_gained 
 c.586C>T 
 p.Arg196Ter 
 De novo 
  
 Simplex 
 GEN367R023 
 frameshift_variant 
 c.621_624delinsGA 
 p.Glu208ThrfsTer6 
 De novo 
  
 Simplex 
 GEN367R024 
 stop_gained 
 c.799C>T 
 p.Gln267Ter 
 Unknown 
 Not maternal 
  
 GEN367R025 
 splice_site_variant 
 c.1240-2A>G 
  
 De novo 
  
  
 GEN367R026 
 splice_site_variant 
 c.489+2T>C 
  
 De novo 
  
  
 GEN367R027 
 stop_gained 
 c.367C>T 
 p.Gln123Ter 
 De novo 
  
  
 GEN367R028 
 splice_site_variant 
 c.638-9_638-5del 
  
 De novo 
  
  
 GEN367R029 
 splice_site_variant 
 c.208-1G>A 
  
 Familial 
 Maternal 
  
 GEN367R030 
 stop_gained 
 c.736C>T 
 p.Arg246Ter 
 De novo 
  
  
 GEN367R031 
 stop_gained 
 c.586C>T 
 p.Arg196Ter 
 De novo 
  
  
 GEN367R032 
 frameshift_variant 
 c.594_597delinsGAA 
 p.Glu199AsnfsTer3 
 De novo 
  
  
 GEN367R033 
 missense_variant 
 c.1036T>C 
 p.Ser346Pro 
 De novo 
  
  
 GEN367R034 
 frameshift_variant 
 c.918dup 
 p.Gln307AlafsTer24 
 De novo 
  
  
 GEN367R035 
 copy_number_loss 
  
  
 De novo 
  
  
 GEN367R036 
 stop_gained 
 c.1309C>T 
 p.Arg437Ter 
 Unknown 
  
  
 GEN367R037 
 frameshift_variant 
 c.817dup 
 p.Ser273LysfsTer6 
 De novo 
  
 Simplex 
 GEN367R038 
 missense_variant 
 c.1763C>A 
 p.Thr588Asn 
 De novo 
  
 Simplex 
 GEN367R039 
 frameshift_variant 
 c.1205dup 
 p.Arg404ThrfsTer10 
 De novo 
  
  
 GEN367R040 
 stop_gained 
 c.312C>G 
 p.Tyr104Ter 
 De novo 
  
 Simplex 
 GEN367R041 
 stop_gained 
 c.613C>T 
 p.Arg205Ter 
 De novo 
  
 Simplex 
 GEN367R042 
 stop_gained 
 c.1399C>T 
 p.Arg467Ter 
 De novo 
  
 Simplex 
 GEN367R043 
 frameshift_variant 
 c.434del 
 p.Lys145SerfsTer11 
 De novo 
  
 Simplex 
 GEN367R044 
 frameshift_variant 
 c.1074_1077del 
 p.Asp359ArgfsTer2 
 De novo 
  
 Simplex 
 GEN367R045 
 frameshift_variant 
 c.425dup 
 p.Asn142LysfsTer12 
 Unknown 
 Not maternal 
 Simplex 
 GEN367R046 
 missense_variant 
 c.563A>T 
 p.Lys188Ile 
 De novo 
  
 Simplex 
 GEN367R047 
 missense_variant 
 c.734T>G 
 p.Leu245Arg 
 De novo 
  
 Simplex 
 GEN367R048 
 missense_variant 
 c.883C>T 
 p.Leu295Phe 
 De novo 
  
 Simplex 
 GEN367R049 
 copy_number_loss 
  
  
 Familial 
 Maternal 
 Multiplex 
 GEN367R050 
 copy_number_loss 
  
  
 De novo 
  
 Simplex 
 GEN367R051 
 copy_number_loss 
  
  
 De novo 
  
 Simplex 
 GEN367R052 
 copy_number_loss 
  
  
 De novo 
  
 Simplex 
 GEN367R053 
 missense_variant 
 c.859G>T 
 p.Asp287Tyr 
 De novo 
  
 Simplex 
 GEN367R054 
 stop_gained 
 c.946C>T 
 p.Gln316Ter 
 De novo 
  
 Simplex 
 GEN367R055 
 frameshift_variant 
 c.1406del 
 p.Phe469SerfsTer114 
 Unknown 
 Not maternal 
 Simplex 
 GEN367R056 
 splice_site_variant 
 c.924+4_924+7del 
  
 De novo 
  
 Simplex 
 GEN367R057 
 stop_gained 
 c.760C>T 
 p.Arg254Ter 
 De novo 
  
 Simplex 
 GEN367R058 
 frameshift_variant 
 c.574_578del 
 p.Gln192ArgfsTer6 
 De novo 
  
  
 GEN367R059 
 stop_gained 
 c.457G>T 
 p.Glu153Ter 
 De novo 
  
  
 GEN367R060 
 missense_variant 
 c.1595C>T 
 p.Thr532Met 
 Familial 
 Paternal 
  
 GEN367R061 
 missense_variant 
 c.1040T>G 
 p.Leu347Arg 
 De novo 
  
  
 GEN367R062 
 translocation 
  
  
 De novo 
  
  
 GEN367R063 
 frameshift_variant 
 c.714del 
 p.Phe238LeufsTer12 
 De novo 
  
 Simplex 
 GEN367R064 
 frameshift_variant 
 c.33del 
 p.Lys11AsnfsTer38 
 De novo 
  
  
 GEN367R065 
 stop_gained 
 c.1309C>T 
 p.Arg437Ter 
 De novo 
  
  
 GEN367R066 
 missense_variant 
 c.829G>C 
 p.Ala277Pro 
 De novo 
  
  
 GEN367R067 
 frameshift_variant 
 c.887dup 
 p.Val297SerfsTer2 
 De novo 
  
  
 GEN367R068 
 frameshift_variant 
 c.275del 
 p.Ile92ThrfsTer49 
 De novo 
  
  
 GEN367R069 
 stop_gained 
 c.763C>T 
 p.Arg255Ter 
 De novo 
  
  
 GEN367R070 
 missense_variant 
 c.1400G>A 
 p.Arg467Gln 
 De novo 
  
  
 GEN367R071 
 splice_site_variant 
 c.952-2A>G 
  
 De novo 
  
  
 GEN367R072 
 stop_gained 
 c.787C>T 
 p.Arg263Ter 
 De novo 
  
  
 GEN367R073 
 frameshift_variant 
 c.272del 
 p.Leu91Ter 
 De novo 
  
  
 GEN367R074 
 inversion 
  
  
 De novo 
  
  
 GEN367R075 
 stop_gained 
 c.1282C>T 
 p.Arg428Ter 
 De novo 
  
  
 GEN367R076 
 splice_site_variant 
 c.665-1G>T 
  
 De novo 
  
  
 GEN367R077 
 missense_variant 
 c.355C>T 
 p.His119Tyr 
 Unknown 
  
  
 GEN367R078 
 missense_variant 
 c.376G>T 
 p.Asp126Tyr 
 Unknown 
  
  
 GEN367R079 
 missense_variant 
 c.398G>A 
 p.Arg133Gln 
 Unknown 
  
  
 GEN367R080 
 missense_variant 
 c.583G>A 
 p.Ala195Thr 
 Unknown 
  
  
 GEN367R081 
 stop_gained 
 c.613C>T 
 p.Arg205Ter 
 Unknown 
  
  
 GEN367R082 
 stop_gained 
 c.715G>T 
 p.Glu239Ter 
 Unknown 
  
  
 GEN367R083 
 missense_variant 
 c.777G>T 
 p.Leu259Phe 
 Unknown 
  
  
 GEN367R084 
 missense_variant 
 c.1373G>T 
 p.Arg458Met 
 Unknown 
  
  
 GEN367R085 
 missense_variant 
 c.1430_1431insA 
 p.Thr478TyrfsTer5 
 Unknown 
  
  
 GEN367R086 
 missense_variant 
 c.183G>C 
 p.Gln61His 
 Unknown 
  
  
 GEN367R087 
 missense_variant 
 c.468G>A 
 p.Met156Ile 
 Unknown 
  
  
 GEN367R088 
 missense_variant 
 c.169T>C 
 p.Ser57Pro 
 Unknown 
  
  
 GEN367R089 
 stop_gained 
 c.691C>T 
 p.Arg231Ter 
 De novo 
  
  
 GEN367R090 
 frameshift_variant 
 c.1464del 
 p.Ala489ProfsTer94 
 De novo 
  
  
 GEN367R091 
 splice_site_variant 
 c.1071+1G>A 
  
 De novo 
  
  
 GEN367R092 
 splice_site_variant 
 T>C 
 p.? 
 Familial 
  
 Multiplex 
 GEN367R093 
 splice_site_variant 
 A>G 
 p.? 
 Familial 
  
 Simplex 
 GEN367R094 
 splice_site_variant 
 G>A 
 p.? 
 Familial 
  
 Multiplex 
 GEN367R095 
 stop_gained 
 c.1639C>T 
 p.Gln547Ter 
 De novo 
  
  
 GEN367R096 
 missense_variant 
 c.1313G>A 
 p.Arg438His 
 De novo 
  
  
 GEN367R097 
 frameshift_variant 
 c.1190_1193del 
 p.Lys397ArgfsTer44 
 De novo 
  
  
 GEN367R098 
 stop_gained 
 c.763C>T 
 p.Arg255Ter 
 De novo 
  
  
 GEN367R099 
 frameshift_variant 
 c.1374delinsGG 
 p.Ile459AspfsTer17 
 De novo 
  
  
 GEN367R100 
 frameshift_variant 
 c.425dup 
 p.Asn142LysfsTer12 
 Unknown 
 Not maternal 
  
 GEN367R101 
 missense_variant 
 c.883C>T 
 p.Leu295Phe 
 De novo 
  
  
 GEN367R102 
 splice_site_variant 
 c.638-8_638-3del 
  
 De novo 
  
  
 GEN367R103 
 frameshift_variant 
 c.1221del 
 p.Lys407AsnfsTer35 
 De novo 
  
  
 GEN367R104 
 frameshift_variant 
 c.1643dup 
 p.Val549GlyfsTer15 
 De novo 
  
 Simplex 
 GEN367R105 
 stop_gained 
 c.691C>T 
 p.Arg231Ter 
 De novo 
  
 Simplex 
 GEN367R106 
 missense_variant 
 c.1634C>T 
 p.Ala545Val 
 Familial 
 Maternal 
 Simplex 
 GEN367R107 
 splice_site_variant 
 c.665-4del 
  
 De novo 
  
 Simplex 
 GEN367R108 
 missense_variant 
 c.1178C>G 
 p.Thr393Ser 
 Unknown 
  
  
 GEN367R109 
 splice_site_variant 
 c.1240-2A>G 
  
 Unknown 
  
 Simplex 
 GEN367R110 
 missense_variant 
 c.525G>A 
 p.Lys175= 
 De novo 
  
  
 GEN367R111 
 frameshift_variant 
 c.489_495del 
 p.Leu164AlafsTer9 
 De novo 
  
  
 GEN367R112 
 frameshift_variant 
 c.474del 
 p.Gly159ValfsTer7 
 De novo 
  
  
 GEN367R113 
 missense_variant 
 c.517G>T 
 p.Val173Phe 
 De novo 
  
  
 GEN367R114 
 stop_gained 
 c.787C>T 
 p.Arg263Ter 
 De novo 
  
  
 GEN367R115 
 frameshift_variant 
 c.986_995del 
 p.Ser329CysfsTer36 
 De novo 
  
  
 GEN367R116 
 missense_variant 
 c.1042G>A 
 p.Gly348Arg 
 De novo 
  
  
 GEN367R117 
 splice_site_variant 
 c.1071+1G>A 
  
 De novo 
  
  
 GEN367R118 
 frameshift_variant 
 c.1135dup 
 p.Ala379GlyfsTer9 
 Familial 
 Paternal 
  
 GEN367R119 
 frameshift_variant 
 c.1217_1220del 
 p.Lys406ArgfsTer44 
 De novo 
  
  
 GEN367R120 
 stop_gained 
 c.1282C>T 
 p.Arg428Ter 
 De novo 
  
  
 GEN367R121 
 stop_gained 
 c.1309C>T 
 p.Arg437Ter 
 Unknown 
 Not maternal 
  
 GEN367R122 
 stop_gained 
 c.1309C>T 
 p.Arg437Ter 
 De novo 
  
  
 GEN367R123 
 missense_variant 
 c.1400G>A 
 p.Arg467Gln 
 De novo 
  
  
 GEN367R124 
 frameshift_variant 
 c.1451dup 
 p.Ser485IlefsTer79 
 De novo 
  
  
 GEN367R125 
 splice_site_variant 
 c.208-28G>A 
  
 Familial 
 Paternal 
 Multiplex 
 GEN367R126 
 stop_gained 
 c.691C>T 
 p.Arg231Ter 
 De novo 
  
 Simplex 
 GEN367R127 
 stop_gained 
 c.2133C>A 
 p.Tyr711Ter 
 De novo 
  
 Simplex 
 GEN367R128 
 stop_gained 
 c.763C>T 
 p.Arg255Ter 
 Unknown 
 Not maternal 
 Simplex 
 GEN367R129 
 stop_gained 
 c.601C>T 
 p.Gln201Ter 
 De novo 
  
 Simplex 
 GEN367R130 
 frameshift_variant 
 c.1185dup 
 p.Lys398GlufsTer16 
 De novo 
  
 Simplex 
 GEN367R131 
 frameshift_variant 
 c.317dup 
 p.Lys107GlufsTer13 
 De novo 
  
  
 GEN367R132 
 stop_gained 
 c.763C>T 
 p.Arg255Ter 
 De novo 
  
  
 GEN367R133 
 splice_site_variant 
 c.1071+1G>A 
  
 De novo 
  
  
 GEN367R134 
 splice_site_variant 
 c.208-1G>A 
  
 Familial 
 Maternal 
  
 GEN367R135 
 splice_site_variant 
 c.208-28G>A 
  
 Familial 
 Maternal 
  
 GEN367R136 
 frameshift_variant 
 c.227dup 
 p.Met76IlefsTer12 
 Familial 
 Paternal 
  
 GEN367R137 
 splice_site_variant 
 c.208-1G>A 
  
 Unknown 
  
  
 GEN367R138 
 missense_variant 
 c.1409C>T 
 p.Pro470Leu 
 Unknown 
  
  
 GEN367R139 
 missense_variant 
 c.982C>T 
 p.Arg328Trp 
 Unknown 
  
  
 GEN367R140 
 missense_variant 
 c.1031T>A 
 p.Met344Lys 
 Unknown 
  
  
 GEN367R141 
 splice_site_variant 
 c.924+4_924+7del 
  
 Unknown 
  
  
 GEN367R142 
 frameshift_variant 
 c.775_776del 
 p.Leu259GlufsTer23 
 Unknown 
  
  
 GEN367R143 
 stop_gained 
 c.349C>T 
 p.Arg117Ter 
 Unknown 
  
  
 GEN367R144 
 stop_gained 
 c.367C>T 
 p.Gln123Ter 
 Unknown 
  
  
 GEN367R145 
 stop_gained 
 c.1325C>G 
 p.Ser442Ter 
 Unknown 
  
  
 GEN367R146 
 frameshift_variant 
 c.1243_1244dup 
 p.Lys416ThrfsTer36 
 Unknown 
  
  
 GEN367R147 
 missense_variant 
 c.1606C>T 
 p.Arg536Trp 
 Familial 
 Paternal 
  
 GEN367R148 
 missense_variant 
 c.1334C>T 
 p.Thr445Met 
 Unknown 
  
  
 GEN367R149 
 missense_variant 
 c.1852C>T 
 p.Arg618Trp 
 Unknown 
  
  
 GEN367R150 
 missense_variant 
 c.1879C>T 
 p.Arg627Trp 
 Unknown 
  
  
 GEN367R151 
 missense_variant 
 c.1879C>T 
 p.Arg627Trp 
 Unknown 
  
  
 GEN367R152 
 missense_variant 
 c.974G>A 
 p.Arg325His 
 Unknown 
  
  
 GEN367R153 
 splice_site_variant 
 c.1072-2A>G 
  
 De novo 
  
  
 GEN367R154 
 stop_gained 
 c.232C>T 
 p.Gln78Ter 
 Unknown 
  
  
 GEN367R155 
 splice_site_variant 
 c.1099-2A>G 
  
 Unknown 
  
  
 GEN367R156 
 frameshift_variant 
 c.570_573del 
 p.Gln190HisfsTer3 
 Unknown 
  
  
 GEN367R157 
 frameshift_variant 
 c.572_575del 
 p.Ala191GlyfsTer2 
 Unknown 
  
  
 GEN367R158 
 stop_gained 
 c.586C>T 
 p.Arg196Ter 
 Unknown 
  
  
 GEN367R159 
 stop_gained 
 c.691C>T 
 p.Arg231Ter 
 Unknown 
  
  
 GEN367R160 
 stop_gained 
 c.763C>T 
 p.Arg255Ter 
 Unknown 
  
  
 GEN367R161 
 missense_variant 
 c.860A>T 
 p.Asp287Val 
 Unknown 
  
  
 GEN367R162 
 stop_gained 
 c.1035G>A 
 p.Met345Ile 
 Unknown 
  
  
 GEN367R163 
 frameshift_variant 
 c.1219_1222del 
 p.Lys407HisfsTer34 
 Unknown 
  
  
 GEN367R164 
 frameshift_variant 
 c.1350dup 
 p.Leu451AlafsTer2 
 Unknown 
  
  
 GEN367R165 
 frameshift_variant 
 c.1400dup 
 p.His467GlnfsTer9 
 Unknown 
  
  
 GEN367R166 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN367R167 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN367R168 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN367R169 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN367R170 
 stop_gained 
 c.361C>T 
 p.Gln121Ter 
 Unknown 
  
  
 GEN367R171 
 stop_gained 
 c.613C>T 
 p.Arg205Ter 
 Unknown 
  
  
 GEN367R172 
 stop_gained 
 c.763C>T 
 p.Arg255Ter 
 Unknown 
  
  
 GEN367R173 
 missense_variant 
 c.878T>A 
 p.Ile293Asn 
 Unknown 
  
  
 GEN367R174 
 inframe_indel 
 c.914_919del 
 p.Leu305_Gln307delinsTer 
 Unknown 
  
  
 GEN367R175 
 stop_gained 
 c.691C>T 
 p.Arg231Ter 
 Unknown 
  
  
 GEN367R176 
 missense_variant 
 c.1028A>C 
 p.Asp343Ala 
 Unknown 
  
  
 GEN367R177 
 missense_variant 
 c.1030A>T 
 p.Met344Leu 
 Unknown 
  
  
 GEN367R178 
 splice_site_variant 
 c.1522G>A 
 p.Gly508Ser 
 Unknown 
  
  
 GEN367R179 
 stop_gained 
 c.349C>T 
 p.Arg117Ter 
 Unknown 
  
  
 GEN367R180 
 missense_variant 
 c.395A>T 
 p.Asp132Val 
 Unknown 
  
  
 GEN367R181 
 frameshift_variant 
 c.398del 
 p.Asp133ValfsTer8 
 Unknown 
  
  
 GEN367R182 
 splice_site_variant 
 c.489+2T>C 
  
 Unknown 
  
  
 GEN367R183 
 stop_gained 
 c.613C>T 
 p.Arg205Ter 
 Unknown 
  
  
 GEN367R184 
 splice_region_variant 
 c.654_658del 
 p.Phe219ValfsTer10 
 Unknown 
  
  
 GEN367R185 
 frameshift_variant 
 c.797del 
 p.Phe266SerfsTer14 
 Unknown 
  
  
 GEN367R186 
 missense_variant 
 c.883C>T 
 p.Leu295Phe 
 Unknown 
  
  
 GEN367R187 
 splice_site_variant 
 c.952_955del 
 p.Tyr318GlyfsTer40 
 Unknown 
  
  
 GEN367R188 
 stop_gained 
 c.1423C>T 
 p.Gln475Ter 
 Unknown 
  
  
 GEN367R189 
 copy_number_loss 
  
  
 De novo 
  
 Simplex 
 GEN367R190 
 missense_variant 
 c.1046G>A 
 p.Cys349Tyr 
 De novo 
  
 Simplex 
 GEN367R191 
 missense_variant 
 c.1028A>G 
 p.Asp343Gly 
 Unknown 
  
 Unknown 
 GEN367R192 
 stop_gained 
 c.957C>G 
 p.Tyr319Ter 
 De novo 
  
 Simplex 
 GEN367R193 
 copy_number_loss 
  
  
 De novo 
  
  
 GEN367R194 
 copy_number_loss 
  
  
 De novo 
  
  
 GEN367R195 
 translocation 
  
  
 De novo 
  
  
 GEN367R196 
 stop_gained 
 c.322C>T 
 p.Arg108Ter 
 Unknown 
  
  
 GEN367R197 
 stop_gained 
 c.349C>T 
 p.Arg117Ter 
 Familial 
 Paternal 
  
 GEN367R198 
 stop_gained 
 c.349C>T 
 p.Arg117Ter 
 De novo 
  
  
 GEN367R199 
 stop_gained 
 c.763C>T 
 p.Arg255Ter 
 Unknown 
  
  
 GEN367R200 
 frameshift_variant 
 c.263_264del 
 p.Ser88CysfsTer2 
 De novo 
  
  
 GEN367R201 
 frameshift_variant 
 c.270_274del 
 p.Leu91GlnfsTer7 
 De novo 
  
  
 GEN367R202 
 frameshift_variant 
 c.477del 
 p.Tyr159Ter 
 De novo 
  
  
 GEN367R203 
 frameshift_variant 
 c.675_676del 
 p.Cys226PhefsTer4 
 De novo 
  
  
 GEN367R204 
 frameshift_variant 
 c.782del 
 p.Leu261GlnfsTer28 
 De novo 
  
  
 GEN367R205 
 frameshift_variant 
 c.1004del 
 p.Gly335GlufsTer33 
 Unknown 
 Not maternal 
  
 GEN367R206 
 frameshift_variant 
 c.1008dup 
 p.Pro337AlafsTer3 
 De novo 
  
  
 GEN367R207 
 frameshift_variant 
 c.1033del 
 p.Trp345GlyfsTer23 
 De novo 
  
  
 GEN367R208 
 frameshift_variant 
 c.1333dup 
 p.Thr445AsnfsTer4 
 De novo 
  
  
 GEN367R209 
 frameshift_variant 
 c.1464del 
 p.Ala489ProfsTer94 
 De novo 
  
  
 GEN367R210 
 frameshift_variant 
 c.1978del 
 p.Ser660ProfsTer43 
 De novo 
  
  
 GEN367R211 
 splice_site_variant 
 c.328-1G>T 
  
 De novo 
  
  
 GEN367R212 
 splice_site_variant 
 c.665-2A>G 
  
 De novo 
  
  
 GEN367R213 
 splice_region_variant 
 c.638-9_638-5del 
  
 De novo 
  
  
 GEN367R214 
 splice_site_variant 
 c.924+4_924+7del 
  
 De novo 
  
  
 GEN367R215 
 splice_site_variant 
 c.1240-2A>G 
  
 De novo 
  
  
 GEN367R216 
 splice_site_variant 
 c.1240-1_1240insTAA 
 p.Arg413_Glu414insTer 
 De novo 
  
  
 GEN367R217 
 missense_variant 
 c.503G>A 
 p.Gly168Asp 
 De novo 
  
  
 GEN367R218 
 missense_variant 
 c.764G>A 
 p.Arg255Gln 
 Unknown 
  
  
 GEN367R219 
 missense_variant 
 c.860A>T 
 p.Asp287Val 
 De novo 
  
  
 GEN367R220 
 missense_variant 
 c.914T>G 
 p.Ile305Arg 
 De novo 
  
  
 GEN367R221 
 missense_variant 
 c.972T>A 
 p.Ser324Arg 
 De novo 
  
  
 GEN367R222 
 inframe_deletion 
 c.1098G>T 
 p.Glu366Asp 
 De novo 
  
  
 GEN367R223 
 missense_variant 
 c.1384T>C 
 p.Tyr462His 
 De novo 
  
  
 GEN367R224 
 missense_variant 
 c.1400G>A 
 p.Arg467Gln 
 De novo 
  
  
 GEN367R225 
 missense_variant 
 c.1457G>A 
 p.Gly486Asp 
 De novo 
  
  
 GEN367R226 
 stop_gained 
 c.1309C>T 
 p.Arg437Ter 
 Unknown 
  
  
 GEN367R227 
 stop_gained 
 c.799C>T 
 p.Gln267Ter 
 De novo 
  
  
 GEN367R228 
 splice_region_variant 
 c.638-9_638-5del 
  
 De novo 
  
  
 GEN367R229 
 stop_gained 
 c.936T>A 
 p.Cys312Ter 
 De novo 
  
  
 GEN367R230 
 splice_site_variant 
 c.924+1G>C 
  
 De novo 
  
  
 GEN367R231 
 frameshift_variant 
 c.1270del 
 p.His424IlefsTer27 
 De novo 
  
  
 GEN367R232 
 copy_number_loss 
  
  
 De novo 
  
  
 GEN367R233 
 frameshift_variant 
 c.208dup 
 p.Arg70LysfsTer9 
 De novo 
  
  
 GEN367R234 
 stop_gained 
 c.1399C>T 
 p.Arg467Ter 
 De novo 
  
  
 GEN367R235 
 stop_gained 
 c.763C>T 
 p.Arg255Ter 
 Unknown 
  
  
 GEN367R236 
 stop_gained 
 c.613C>T 
 p.Arg205Ter 
 Unknown 
  
  
 GEN367R237 
 stop_gained 
 c.1669C>T 
 p.Gln557Ter 
 De novo 
  
  
 GEN367R238 
 synonymous_variant 
 c.1536G>A 
 p.Ser512%3D 
 Unknown 
  
  
 GEN367R239 
 stop_gained 
 c.1399C>T 
 p.His467Tyr 
 Unknown 
  
  
 GEN367R240 
 frameshift_variant 
 c.250dup 
 p.Leu84ProfsTer7 
 De novo 
  
  
 GEN367R241 
 splice_site_variant 
 c.328-2A>G 
  
 De novo 
  
  
 GEN367R242 
 stop_gained 
 c.349C>T 
 p.Arg117Ter 
 De novo 
  
  
 GEN367R243 
 frameshift_variant 
 c.451_466del 
 p.Glu151Ter 
 De novo 
  
  
 GEN367R244 
 frameshift_variant 
 c.572_575del 
 p.Ala191GlyfsTer2 
 De novo 
  
  
 GEN367R245 
 frameshift_variant 
 c.572_575del 
 p.Ala191GlyfsTer2 
 De novo 
  
  
 GEN367R246 
 stop_gained 
 c.613C>T 
 p.Arg205Ter 
 De novo 
  
  
 GEN367R247 
 stop_gained 
 c.657C>A 
 p.Tyr219Ter 
 De novo 
  
  
 GEN367R248 
 stop_gained 
 c.691C>T 
 p.Arg231Ter 
 De novo 
  
  
 GEN367R249 
 stop_gained 
 c.705_707delinsAC 
 p.Asn235LysfsTer6 
 De novo 
  
  
 GEN367R250 
 missense_variant 
 c.848T>G 
 p.Ile283Ser 
 De novo 
  
  
 GEN367R251 
 splice_site_variant 
 c.956_959del 
 p.Arg319LeufsTer39 
 Unknown 
  
  
 GEN367R252 
 stop_gained 
 c.1035G>A 
 p.Met345Ile 
 De novo 
  
  
 GEN367R253 
 frameshift_variant 
 c.1400dup 
 p.His467GlnfsTer9 
 De novo 
  
  
 GEN367R254 
 frameshift_variant 
 c.1406del 
 p.Phe469SerfsTer114 
 Unknown 
  
  
 GEN367R255 
 stop_gained 
 c.1653C>A 
 p.Cys551Ter 
 De novo 
  
  
 GEN367R256 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN367R257 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN367R258 
 frameshift_variant 
 c.1031_1037del 
 p.Met344ThrfsTer22 
 Unknown 
  
  
 GEN367R259 
 missense_variant 
 c.1730T>A 
 p.Val577Asp 
 Unknown 
  
  
 GEN367R260 
 missense_variant 
 c.214C>G 
 p.Pro72Ala 
 Unknown 
  
  
 GEN367R261 
 frameshift_variant 
 c.1316del 
 p.Asp439AlafsTer3 
 De novo 
  
  
 GEN367R262 
 stop_gained 
 c.1399C>T 
 p.His467Tyr 
 De novo 
  
 Simplex 
 GEN367R263 
 stop_gained 
 c.586C>T 
 p.Arg196Ter 
 De novo 
  
 Simplex 
 GEN367R264 
 frameshift_variant 
 c.572_575del 
 p.Lys191ThrfsTer6 
 De novo 
  
 Simplex 
 GEN367R265 
 splice_region_variant 
 c.665-9_665-5del 
  
 De novo 
  
  
 GEN367R266 
 frameshift_variant 
 c.848dup 
 p.Asn283LysfsTer6 
 De novo 
  
 Simplex 
 GEN367R267 
 splice_site_variant 
 c.956G>A 
 p.Arg319Gln 
 De novo 
  
  
 GEN367R268 
 copy_number_loss 
  
  
 De novo 
  
 Simplex 
 GEN367R269 
 stop_gained 
 c.613C>T 
 p.Arg205Ter 
 Unknown 
  
 Simplex 
 GEN367R270 
 missense_variant 
 c.1028A>G 
 p.Asp343Gly 
 De novo 
  
  
  et al.  
 GEN367R271 
 stop_gained 
 c.349C>T 
 p.Arg117Ter 
 De novo 
  
 Simplex 
  et al.  
 GEN367R272 
 stop_gained 
 c.1764del 
 p.His590MetfsTer2 
 De novo 
  
 Simplex 
  et al.  
 GEN367R273 
 stop_gained 
 c.1159C>T 
 p.Gln387Ter 
 De novo 
  
 Multiplex 
  et al.  
 GEN367R274 
 stop_gained 
 c.1309C>T 
 p.Arg437Ter 
 De novo 
  
 Simplex 
  et al.  
 GEN367R275 
 copy_number_loss 
  
 p.Gly4_Asn109del 
 De novo 
  
 Simplex 
  et al.  
 GEN367R276 
 frameshift_variant 
 c.948_949insGG 
 p.Phe317GlyfsTer43 
 Unknown 
  
  
  et al.  
 GEN367R277 
 frameshift_variant 
 c.894del 
 p.Phe299LeufsTer60 
 Unknown 
  
 Simplex 
  et al.  
 GEN367R278 
 frameshift_variant 
 c.539dup 
 p.Ile181AsnfsTer19 
 De novo 
  
 Simplex 
  et al.  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
21
Duplication
 3
 
21
Duplication
 11
 
21
Duplication
 2
 
21
Deletion-Duplication
 1
 
21
Deletion
 1
 
21
Duplication
 4
 
21
Deletion
 2
 
21
Deletion-Duplication
 9
 
21
Deletion
 3
 
21
Deletion
 3
 

Model Summary

Dyrk1a knockout in zebrafish causes reductioni n size in various brain regions including the telencephalon, cerebellum and optic tectum.

References

Type
Title
Author, Year
Primary
Zebrafish knockout of Down syndrome gene, DYRK1A, shows social impairments relevant to autism.

Z_DYRK1A^KRB1_KO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: Dyrk1aa knock out fish were generated using a TALEN pair targeting exon 5 leading to the introduction of an early stop codon following a 7 bp deletion. This leads to a truncation of the protein, including most of the kinase domain and loss of function.In vitro transcribed RNA of the TALEN pair was microinjected into 1~2 cell stage fertilized zebrafish eggs and a stable mutant line called dyrk1aakrb1 was obtained, grown till adulthood (4 months). In-crossed to obtain homozygosity.
Allele Type: Targeted(knockout)
Strain of Origin:
Genetic Background:
ES Cell Line:
Mutant ES Cell Line:
Model Source: Cheol-Hee Kim

Z_DYRK1A^KRB1_KO_HT

Model Type: Genetic
Model Genotype: Heterozygous
Mutation: Dyrk1aa knock out fish were generated using a TALEN pair targeting exon 5 leading to the introduction of an early stop codon following a 7 bp deletion. This leads to a truncation of the protein, including most of the kinase domain and loss of function.In vitro transcribed RNA of the TALEN pair was microinjected into 1~2 cell stage fertilized zebrafish eggs and a stable mutant line called dyrk1aakrb1 was obtained, grown till adulthood (4 months), maintained using out-crosses with wt fish.
Allele Type: Targeted(knockout)
Strain of Origin:
Genetic Background:
ES Cell Line:
Mutant ES Cell Line:
Model Source: Cheol-Hee Kim

Z_DYRK1A^KRB1_KO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Cerebellar morphology: corpus cerebelli1
Decreased
Description: Dyrk1a KO zebrafish have pronounced size reduction in the corpus cerebelli
 Histology
 7 months post fertilization
Brain size1
Decreased
Description: Dyrk1a KO zebrafish display microcephaly
 Histology
 7 months post fertilization
Morphology of telencephalon1
Decreased
Description: Dyrk1a KO zebrafish have pronounced size reduction in the telencephalon
 Histology
 7 months post fertilization
Morphology of optic tectum1
Decreased
Description: Dyrk1a KO zebrafish have pronounced size reduction in the optic tectum
 Histology
 7 months post fertilization
Neuronal activation following behavioral stimulation: c-fos levels1
Decreased
Description: c-fos levels were reduced in Dyrk1a KO zebrafish ventral hypothalamic region compared to WT following handling stress
 In situ hybridization (ish)
 7 months post fertilization
Apoptosis: brain cells1
Increased
Description: Dyrk1a KO zebrafish have increased apoptotic cell death in the brain which authors indicate gives rise to microcephaly
 Expression of cleaved caspase-3 (cc3)
 3 weeks post fertilization
Social withdrawal1
Increased
Description: Dyrk1a KO zebrafish display decrease in preference for aggregation or social cohesion in the shoaling assay where they do not exhibit formation of groups , aggregation or shoals
 Shoaling assay
 7 months post fertilization
Social interaction1
Decreased
Description: Dyrk1a KO zebrafish show reduced social interaction in the parition test in tank, where the social cues are fish behind a transparent acrylic wall
 Partition test in tank
 7 months post fertilization
Acute stress response1
Decreased
Description: Dyrk1a KO zebrafish showed reduced expression of the stress hormone corticotrophin-releasing hormone mRNA in the preoptic area (mammalian homolog of paraventricular nucleus)
 In situ hybridization (ish)
 7 months post fertilization
Anxiety1
Decreased
Description: Dyrk1a KO zebrafish have reduced anxiety in the novel tank diving test as they spend more time in the top and middle zones of the tank and also show reduced freezing, compared to wt
Exp Paradigm: Time spent in the top, time spent in the middle of tank and freezing time
 Novel tank diving test
 7 months post fertilization
Locomotor activity in diurnal cycle1
 No change
 General observations
 5-7 dpf
Developmental trajectory1
 No change
 General observations
 4 months post fertilization
Mortality/lethality1
 No change
 General observations
 7 months post fertilization
Size/growth1
 No change
 Body length measurement
 7 months post fertilization
Gene expression1
 No change
 In situ hybridization (ish)
 24 hpf
Gene expression1
 No change
 In situ hybridization (ish)
 48 hpf
Gene expression1
 No change
 In situ hybridization (ish)
 48 hpf
General locomotor activity1
 No change
 Novel tank diving test
 7 months post fertilization
Reproductive function1
 No change
 General observations
 7 months post fertilization
Visual motor response1
 No change
 Optomotor response to dark flash pulses
 6 dpf
 Not Reported: Communications, Immune response, Learning & memory, Maternal behavior, Physiological parameters, Repetitive behavior, Seizure, Sensory

Z_DYRK1A^KRB1_KO_HT

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Locomotor activity in diurnal cycle1
 No change
 General observations
 5-7 dpf
Visual motor response1
 No change
 Optomotor response to dark flash pulses
 6 dpf
 Not Reported: Communications, Developmental profile, Emotion, Immune response, Learning & memory, Maternal behavior, Molecular profile, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
ABLIM1 actin binding LIM protein 1 3983 O14639 Protein microarray; IP/WB
Schneider P , et al. 2015
C10ORF71 Uncharacterized protein C10orf71 118461 Q711Q0-3 IP; LC-MS/MS
Huttlin EL , et al. 2015
CAPN1 Calpain-1 catalytic subunit 823 P07384 in vitro proteolysis assay; IP/WB
Jin N , et al. 2015
CHD8 chromodomain helicase DNA binding protein 8 57680 Q9HCK8 ChIP-chip
Subtil-Rodrguez A , et al. 2013
DCAF7 DDB1 and CUL4 associated factor 7 10238 P61962 IP; MS
Miyata Y and Nishida E 2011
DCAF7 DDB1 and CUL4 associated factor 7 10238 P61962 IP; LC-MS/MS
Huttlin EL , et al. 2015
DCHS1 dachsous 1 (Drosophila) 8642 Q96JQ0 IP; LC-MS/MS
Li J , et al. 2016
EEF1G eukaryotic translation elongation factor 1 gamma 1937 P26641 IP; LC-MS/MS
Li J , et al. 2016
FAM117B family with sequence similarity 117, member B 150864 Q6P1L5 IP; LC-MS/MS
Huttlin EL , et al. 2015
FAM53C family with sequence similarity 53, member C 51307 Q9NYF3 IP; LC-MS/MS
Huttlin EL , et al. 2015
FMR1 fragile X mental retardation 1 2332 G8JLE9 PAR-CLIP
Ascano M Jr , et al. 2012
FNTB Protein farnesyltransferase subunit beta 100529261 P49356 IP; LC-MS/MS
Huttlin EL , et al. 2015
GLCCI1 glucocorticoid induced transcript 1 113263 Q86VQ1 IP; LC-MS/MS
Li J , et al. 2016
HISTIH2B3 histone cluster 1, H3a 8350 P68431 in vitro kinase assay; MS
Himpel S , et al. 2000
histone H3 Histone H3.1 8350 P68431 IP/WB; GST
Jang SM , et al. 2014
IFI44 Interferon-induced protein 44 10561 Q8TCB0 ChIP
Jang SM , et al. 2014
IL1a interleukin 1, alpha 3552 P01583 ChIP
Jang SM , et al. 2014
IL6 interleukin 6 (interferon, beta 2) 3569 B4DVM1 ChIP
Jang SM , et al. 2014
IL8 interleukin 8 3576 P10145 ChIP
Jang SM , et al. 2014
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 84859 Q96II8 IP; LC-MS/MS
Huttlin EL , et al. 2015
LZTS2 leucine zipper, putative tumor suppressor 2 84445 Q9BRK4 IP; LC-MS/MS
Huttlin EL , et al. 2015
LZTS2 leucine zipper, putative tumor suppressor 2 84445 Q9BRK4 IP; LC-MS/MS
Li J , et al. 2016
LZTS3 leucine zipper, putative tumor suppressor family member 3 9762 O60299 IP; LC-MS/MS
Li J , et al. 2016
MAPT microtubule-associated protein tau 4137 P10636 in vitro kinase assay
Jin N , et al. 2015
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 4772 B5B2M8 Genome-wide RNAi screen; IP
Gwack Y , et al. 2006
NUP107 nucleoporin 107kDa 57122 P57740 IP; LC-MS/MS
Li J , et al. 2016
NUP214 nucleoporin 214kDa 8021 P35658 IP; LC-MS/MS
Li J , et al. 2016
NUP98 nucleoporin 98kDa 4928 P52948 IP; LC-MS/MS
Li J , et al. 2016
NXF2 Nuclear RNA export factor 2 56001 Q9GZY0 IP; LC-MS/MS
Huttlin EL , et al. 2015
POM121 POM121 membrane glycoprotein 9883 Q96HA1 IP; LC-MS/MS
Li J , et al. 2016
PRKACB protein kinase, cAMP-dependent, catalytic, beta NM_207578 P22694 IP; LC-MS/MS
Huttlin EL , et al. 2015
RCAN1 regulator of calcineurin 1 1827 P53805 in vitro kinase assay
Jung MS , et al. 2011
RFPL2 Ret finger protein-like 2 10739 O75678-2 IP; LC-MS/MS
Huttlin EL , et al. 2015
RNF169 ring finger protein 169 254225 Q8NCN4 IP; LC-MS/MS
Li J , et al. 2016
SEC16A SEC16 homolog A (S. cerevisiae) 9919 O15027 IP; LC-MS/MS
Li J , et al. 2016
TNFa Tumor necrosis factor, membrane form 7124 P01375 ChIP
Jang SM , et al. 2014
TNFAIP6 Tumor necrosis factor-inducible gene 6 protein 7130 P98066 ChIP
Jang SM , et al. 2014
TOP3B topoisomerase (DNA) III beta 8940 O95985 HITS-CLIP
Xu D , et al. 2013
TRMT61B tRNA methyltransferase 61 homolog B (S. cerevisiae) 55006 Q9BVS5 IP; LC-MS/MS
Li J , et al. 2016
TROAP trophinin associated protein 10024 Q12815 IP; LC-MS/MS
Li J , et al. 2016
VDAC2 voltage-dependent anion channel 2 7417 P45880 IP; LC-MS/MS
Li J , et al. 2016
WASL Wiskott-Aldrich syndrome-like 8976 O00401 in vitro kinase assay
Park J , et al. 2012
GluN2A Glutamate receptor ionotropic, NMDA 2A 24409 Q00959 GST; IP/WB; in vitro kinase assay
Grau C , et al. 2014
Amph amphiphysin 60668 O08838 in vitro kinase assay; Ligand blotting; in vivo kinase assay
Murakami N , et al. 2006
Ap1b1 adaptor-related protein complex 1, beta 1 subunit 29663 P52303 in vitro kinase assay; MS; IP
Murakami N , et al. 2012
Ap2a2 adaptor-related protein complex 2, alpha 2 subunit 81637 Q66HM2 IP; MS; in vitro kinase assay
Murakami N , et al. 2012
Dnm1 dynamin 1-like 114114 O35303 in vitro kinase assay
Chen-Hwang MC , et al. 2002
Map1a microtubule-associated protein 1A 25152 P34926 in vitro kinase assay; MS; IP
Murakami N , et al. 2012
Map2 microtubule-associated protein 2 25595 Q64715 IP; MS; in vitro kinase assay
Murakami N , et al. 2012
SNAP91 synaptosomal-associated protein 91 65178 Q05140 IP; MS; in vitro kinase assay
Murakami N , et al. 2012
Synj1 synaptojanin 1 85238 Q62910 in vitro kinase assay; MS; in vitro phosphatase assay; IP/WB
Adayev T , et al. 2006
Synj synaptojanin 37517 Q5U0V7 IP/WB; Immunohistochemistry
Chen CK , et al. 2014
ctnnd1 catenin (cadherin-associated protein), delta 1 100101665 B2GUD2 Electrophysiology; IP
Hong JY , et al. 2012
zbtb33 zinc finger and BTB domain containing 33 398248 Q8UVQ4 Electrophysiology; IP
Hong JY , et al. 2012
FOXO1 forkhead box O1 2308 Q12778 in vitro kinase assay; MS; Immunofluorescence; IP
Woods YL , et al. 2001

HELP
Copyright © 2017 MindSpec, Inc.