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Relevance to Autism

Desprez et al., 2025 reported six different missense variants in the DPYSL5 gene (including the previously identified p.Glu41Lys recurrent variant that was experimentally confirmed as a loss-of-function variant in Jeanne et al., 2021) in three male fetuses and six individuals aged up to 10 years old; all living participants in this cohort had developmental delay (6/6), predominantly in language (5/6), and mild to severe intellectual disability (5/5), while four of these individuals had autism spectrum disorder. Subsequent functional assays of novel DPYSL5 missense variants in differentiating mouse or human neuronal cultures in Desprez et al., 2025 revealed impairments in dendritic arborization, axonal elongation, and synaptic density. Of the nine individuals with Ritscher-Schinzel syndrome 4 reported in Jeanne et al., 2021, ASD was reported in one and stereotypic movements were reported in two others. A de novo missense variant in the DPYSL5 gene was identified in an ASD proband from the Autism Sequencing Consortium (De Rubeis et al., 2014).

Molecular Function

This gene encodes a member of the CRMP (collapsing response mediator protein) family thought to be involved in neural development. Antibodies to the encoded protein were found in some patients with neurologic symptoms who had paraneoplastic syndrome. Heterozygous variants in the DPYSL5 gene are responsible for Ritscher-Schinzel syndrome 4 (OMIM 619435), a disorder characterized by a constellation of congenital anomalies, including dysmorphic craniofacial features and structural brain anomalies, associated with global developmental delay and impaired intellectual development (Jeanne et al., 2021).

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Missense variants in DPYSL5 associated with neurodevelopmental disorders and brain malformations cause impaired neuronal maturation in vitro
DD, ID
ASD
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Missense variants in DPYSL5 cause a neurodevelopmental disorder with corpus callosum agenesis and cerebellar abnormalities
Ritscher-Schinzel syndrome 4, DD, ID
ASD, stereotypy, epilepsy/seizures

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1524R001 
 missense_variant 
 c.73G>A 
 p.Glu25Lys 
 De novo 
  
 Simplex 
 GEN1524R002 
 missense_variant 
 c.73G>A 
 p.Glu25Lys 
 De novo 
  
 Simplex 
 GEN1524R003 
 missense_variant 
 c.73G>A 
 p.Glu25Lys 
 De novo 
  
 Simplex 
 GEN1524R004 
 missense_variant 
 c.121G>A 
 p.Glu41Lys 
 De novo 
  
 Simplex 
 GEN1524R005 
 missense_variant 
 c.121G>A 
 p.Glu41Lys 
 De novo 
  
 Simplex 
 GEN1524R006 
 missense_variant 
 c.692G>A 
 p.Arg231His 
 Unknown 
  
 Unknown 
 GEN1524R007 
 missense_variant 
 c.757G>T 
 p.Ala253Ser 
 De novo 
  
 Simplex 
 GEN1524R008 
 missense_variant 
 c.1060C>T 
 p.Arg354Cys 
 De novo 
  
 Simplex 
 GEN1524R009 
 missense_variant 
 c.1562G>A 
 p.Arg521Gln 
 De novo 
  
 Simplex 
 GEN1524R010 
 missense_variant 
 c.121G>A 
 p.Glu41Lys 
 De novo 
  
  
 GEN1524R011 
 missense_variant 
 c.121G>A 
 p.Glu41Lys 
 De novo 
  
  
 GEN1524R012 
 missense_variant 
 c.121G>A 
 p.Glu41Lys 
 De novo 
  
  
 GEN1524R013 
 missense_variant 
 c.121G>A 
 p.Glu41Lys 
 De novo 
  
  
 GEN1524R014 
 missense_variant 
 c.121G>A 
 p.Glu41Lys 
 De novo 
  
  
 GEN1524R015 
 missense_variant 
 c.121G>A 
 p.Glu41Lys 
 De novo 
  
  
 GEN1524R016 
 missense_variant 
 c.121G>A 
 p.Glu41Lys 
 De novo 
  
  
 GEN1524R017 
 missense_variant 
 c.121G>A 
 p.Glu41Lys 
 De novo 
  
  
 GEN1524R018 
 missense_variant 
 c.139G>A 
 p.Gly47Arg 
 De novo (germline mosaicism) 
  
 Multiplex 
 GEN1524R019 
 missense_variant 
 c.1090G>A 
 p.Val364Ile 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
2
Deletion
 14
 
2
Duplication
 1
 
2
Duplication
 1
 

No Animal Model Data Available

 

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