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Relevance to Autism

A de novo missense variant in the DNM1 gene was identified in an ASD proband from the SPARK proband (Feliciano et al., 2019), while a damaging missense variant in this gene was identified in three ASD-affected siblings from the BARAKA-Qatar study and their father, who was diagnosed with ADHD and presented with autistic features (Abdi et al., 2023). Additional loss-of-function and damaging missense variants in DNM1 were reported in individuals from ASD and developmental delay cohorts in Wang et al., 2020. One of the five individuals with DNM1-related autosomal dominant developmental and epileptic encephalopathy described in EuroEPINOMICS-RES Consortium 2014 was reported to have autism spectrum disorder, while both individuals with DNM1-related autosomal recessive developmental and epileptic encephalopathy described in Yigit et al., 2022 were reported to present with stereotypical movements. A de novo missense variant in DNM1 was identified in twin siblings presenting with diagnoses of autism spectrum disorder, developmental delay, and intellectual disability without epileptic encephalopathy in Brereton et al., 2018, while a de novo missense variant in this gene was reported in a adult male with autism, intellectual disability, and mild epilepsy in Mei et al., 2023.

Molecular Function

This gene encodes a member of the dynamin subfamily of GTP-binding proteins. The encoded protein possesses unique mechanochemical properties used to tubulate and sever membranes, and is involved in clathrin-mediated endocytosis and other vesicular trafficking processes. Actin and other cytoskeletal proteins act as binding partners for the encoded protein, which can also self-assemble leading to stimulation of GTPase activity. Heterozygous and homozygous mutations in this gene are responsible for autosomal dominant and autosomal recessive forms of developmental and epileptic encephalopathy, respectively (EuroEPINOMICS-RES Consortium 2014; Deciphering Developmental Disorders Study 2015; Yigit et al., 2022; AlTassan et al., 2022).

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
ASD
ADHD
Support
De novo mutations in synaptic transmission genes including DNM1 cause epileptic encephalopathies.
Developmental and epileptic encephalopathy-31A, DD
ASD
Support
Developmental and epileptic encephalopathy-31B, DD
Support
Developmental and epileptic encephalopathy-31B, DD
Stereotypy
Support
Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders
ASD, DD
Support
Exome sequencing of 457 autism families recruited online provides evidence for autism risk genes
ASD
Support
ASD, DD, ID
Support
Epilepsy/seizures
DD
Support
Large-scale discovery of novel genetic causes of developmental disorders.
Developmental and epileptic encephalopathy-31A, DD
Support
ASD, ID, epilepsy/seizures

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1426R001 
 missense_variant 
 c.1660A>G 
 p.Lys554Glu 
 De novo 
  
  
 GEN1426R002 
 missense_variant 
 c.796C>T 
 p.Arg266Cys 
 Familial 
 Paternal 
 Multiplex 
  et al.  
 GEN1426R003 
 missense_variant 
 c.1154G>A 
 p.Arg385Gln 
 Familial 
  
  
 GEN1426R004 
 missense_variant 
 c.199C>T 
 p.Arg67Cys 
 Unknown 
  
  
 GEN1426R005 
 stop_gained 
 c.766C>T 
 p.Arg256Ter 
 Familial 
  
  
 GEN1426R006 
 stop_gained 
 c.1261C>T 
 p.Arg421Ter 
 Familial 
  
  
 GEN1426R007 
 stop_gained 
 c.1622dup 
 p.Tyr541Ter 
 Familial 
  
  
 GEN1426R008 
 missense_variant 
 c.1291G>A 
 p.Val431Ile 
 Unknown 
  
  
 GEN1426R009 
 stop_gained 
 c.1335+1701C>T 
  
 Unknown 
  
  
 GEN1426R010 
 missense_variant 
 c.1268C>T 
 p.Pro423Leu 
 Unknown 
  
  
 GEN1426R011 
 missense_variant 
 c.889C>T 
 p.Arg297Trp 
 Unknown 
  
  
 GEN1426R012 
 missense_variant 
 c.889C>T 
 p.Arg297Trp 
 Unknown 
  
  
 GEN1426R013 
 missense_variant 
 c.812G>A 
 p.Arg271His 
 Unknown 
  
  
 GEN1426R014 
 missense_variant 
 c.1300G>A 
 p.Glu434Lys 
 Unknown 
  
  
 GEN1426R015 
 missense_variant 
 c.1394G>A 
 p.Arg465Gln 
 Unknown 
  
  
 GEN1426R016 
 missense_variant 
 c.596G>T 
 p.Arg199Leu 
 Unknown 
  
  
 GEN1426R017 
 missense_variant 
 c.709C>T 
 p.Arg237Trp 
 Unknown 
  
  
 GEN1426R018 
 missense_variant 
 c.1037G>A 
 p.Gly346Asp 
 Unknown 
  
  
 GEN1426R019 
 missense_variant 
 c.788C>T 
 p.Pro263Leu 
 Unknown 
  
  
 GEN1426R020 
 missense_variant 
 c.788C>T 
 p.Pro263Leu 
 Unknown 
  
  
 GEN1426R021 
 missense_variant 
 c.788C>T 
 p.Pro263Leu 
 Unknown 
  
  
 GEN1426R022 
 missense_variant 
 c.529G>C 
 p.Ala177Pro 
 De novo 
  
 Simplex 
 GEN1426R023 
 missense_variant 
 c.618G>C 
 p.Lys206Asn 
 De novo 
  
 Simplex 
 GEN1426R024 
 missense_variant 
 c.1076G>C 
 p.Gly359Ala 
 De novo 
  
 Simplex 
 GEN1426R025 
 missense_variant 
 c.709C>T 
 p.Arg237Trp 
 De novo 
  
 Simplex 
 GEN1426R026 
 missense_variant 
 c.194C>A 
 p.Thr65Asn 
 De novo 
  
 Simplex 
 GEN1426R027 
 missense_variant 
 c.709C>T 
 p.Arg237Trp 
 De novo 
  
 Unknown 
 GEN1426R028 
 missense_variant 
 c.1186C>G 
 p.His396Asp 
 De novo 
  
 Simplex 
 GEN1426R029 
 missense_variant 
 c.865A>T 
 p.Ile289Phe 
 De novo 
  
 Simplex 
 GEN1426R030 
 missense_variant 
 c.1603A>G 
 p.Lys535Glu 
 De novo 
  
 Multiplex (monozygotic twins) 
  et al.  
 GEN1426R031 
 missense_variant 
 c.1994T>C 
 p.Leu665Pro 
 De novo 
  
  
  et al.  
 GEN1426R032a 
 stop_gained 
 c.97C>T 
 p.Gln33Ter 
 Familial 
 Both parents 
 Simplex 
  et al.  
 GEN1426R033a 
 stop_gained 
 c.850C>T 
 p.Gln284Ter 
 Familial 
 Both parents 
 Simplex 
  et al.  
 GEN1426R034a 
 frameshift_variant 
 c.350del 
 p.Pro117ArgfsTer14 
 Familial 
 Both parents 
 Simplex 
  et al.  
 GEN1426R035 
 splice_region_variant 
 c.1197-8G>A 
  
 De novo 
  
  
  et al.  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
9
Duplication
 1
 
9
Duplication
 2
 
9
Deletion
 1
 
9
Duplication
 1
 
9
Deletion
 4
 
9
Duplication
 1
 
9
Deletion-Duplication
 16
 

No Animal Model Data Available

 

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