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Relevance to Autism

De novo missense variants in the DLX3 gene have been identified in two ASD probands (Iossifov et al., 2014). An integrated meta-analysis of de novo mutation data from a combined dataset of 10,927 individuals with neurodevelopmental disorders identified DLX3 as a gene with an excess of missense variants (false discovery rata < 5%, count >1); DLX3 was similarly identified as a gene with an excess of de novo missense variants (false discovery rata < 5%, count >1) following analysis of 5,624 cases with a primary diagnosis of ASD (Coe et al., 2018).

Molecular Function

Likely to play a regulatory role in the development of the ventral forebrain and may play a role in craniofacial patterning and morphogenesis. Trichodentoosseous syndrome (TDO), an autosomal dominant condition, has been correlated with DLX3 gene mutation.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders
ASD, DD
Recent Recommendation
Neurodevelopmental disease genes implicated by de novo mutation and copy number variation morbidity.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1063R001 
 missense_variant 
 c.626C>T 
 p.Ser209Leu 
 De novo 
  
 Simplex 
 GEN1063R002 
 missense_variant 
 c.157G>A 
 p.Gly53Ser 
 De novo 
  
 Simplex 
 GEN1063R003 
 missense_variant 
 c.571G>A 
 p.Gly191Arg 
 Unknown 
  
  
 GEN1063R004 
 missense_variant 
 c.404T>G 
 p.Ile135Ser 
 Unknown 
  
  
 GEN1063R005 
 missense_variant 
 c.415T>C 
 p.Tyr139His 
 Unknown 
  
  
 GEN1063R006 
 missense_variant 
 c.571G>A 
 p.Gly191Arg 
 Unknown 
  
  
 GEN1063R007 
 synonymous_variant 
 c.654C>T 
 p.Thr218%3D 
 De novo 
  
  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
17
Duplication
 1
 
17
Deletion
 2
 
17
Duplication
 1
 
17
Deletion
 1
 

No Animal Model Data Available

 

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