DLL1
Homo sapiens
Gene Name: delta like canonical Notch ligand 1
Aliases: DELTA1, DL1, Delta
Chromosome No: 6
Chromosome Band: 6q27
Genetic Category: Rare single gene variant-Syndromic
Aliases: DELTA1, DL1, Delta
Chromosome No: 6
Chromosome Band: 6q27
Genetic Category: Rare single gene variant-Syndromic
Summary Statistics:
ASD Reports: 8
Recent Reports: 2
Annotated variants: 26
Associated CNVs: 5
Evidence score: 4
ASD Reports: 8
Recent Reports: 2
Annotated variants: 26
Associated CNVs: 5
Evidence score: 4
| Associated Disorders: |
|
Relevance to Autism
A de novo frameshift variant in the DLL1 gene was identified in an ASD proband from the Simons Simplex Collection in O'Roak et al., 2014. Fischer-Zirnsak et al., 2019 identified 15 individuals from 12 unrelated families with heterozygous and likely pathogenic DLL1 variants; the most common phenotypes observed in this cohort were developmental delay/intellectual disability (12/14), autism spectrum disorder (6/14), seizures (6/14), muscular hypotonia (6/14), abnormal brain MRI (11/15), and facial dysmorphism (8/15).
Molecular Function
DLL1 is a human homolog of the Notch Delta ligand and is a member of the delta/serrate/jagged family. It plays a role in mediating cell fate decisions during hematopoiesis. It may play a role in cell-to-cell communication.
References
Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Recurrent de novo mutations implicate novel genes underlying simplex autism risk.
ASD
Support
The NeuroWES project: lessons learned from comprehensive phenotyping and genetic analysis of neurodevelopmental disorders over a decade.
ASD
DD, epilepsy/seizures
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Recent Recommendation
Genomic landscape of rare variants in a Chinese autism cohort and discovery of novel risk genes.
ASD
Recent Recommendation
Haploinsufficiency of the Notch Ligand DLL1 Causes Variable Neurodevelopmental Disorders.
DD, ID
ASD, epilepsy/seizures, hypotonia, abnormal brain
Rare
Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
GEN1094R003
stop_gained
c.231C>A
p.Cys77Ter
Familial
Maternal
Multiplex
GEN1094R004
stop_gained
c.1525C>T
p.Arg509Ter
Familial
Paternal
Multi-generational
GEN1094R005
frameshift_variant
c.2013_2014del
p.Glu673GlyfsTer15
Unknown
GEN1094R006
frameshift_variant
c.50_51del
p.Cys17SerfsTer108
Unknown
GEN1094R007
frameshift_variant
c.2013_2014del
p.Glu673GlyfsTer15
De novo
Simplex
GEN1094R008
frameshift_variant
c.1401_1402insCACCT
p.Thr468HisfsTer71
De novo
GEN1094R009
frameshift_variant
c.543_544insACACTACTACGGAGAGGGCTGCTCCGTT
p.His182ThrfsTer59
Unknown
Not maternal
Multi-generational
GEN1094R011
splice_site_variant
c.54_54+1insTAGTCG
p.Gln18_Val19insTer
De novo
GEN1094R021
frameshift_variant
c.1538dup
p.Pro514SerfsTer21
De novo
Simplex
GEN1094R025
frameshift_variant
c.1109_1110delinsT
p.Cys370LeufsTer93
De novo
Simplex
Common
No Common Variants Available





