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Relevance to Autism

Lessel et al., 2017 identified six different de novo missense variants in the DHX30 gene in 12 unrelated individuals affected by a neurodevelopmental disorder characterized by global developmental delay, intellectual disability, severe speech impairment, hypotonia, and gait abnormalities; in addition to these core phenotypes, seven individuals also presented with autistic features.

Molecular Function

DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this DEAD box protein family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. The family member encoded by this gene is a mitochondrial nucleoid protein that associates with mitochondrial DNA. It has also been identified as a component of a transcriptional repressor complex that functions in retinal development, and it is required to optimize the function of the zinc-finger antiviral protein.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
De Novo Missense Mutations in DHX30 Impair Global Translation and Cause a Neurodevelopmental Disorder.
DD, ID
Autistic features
Support
DD, ID, epilepsy/seizures
Autistic features, stereotypy
Support
Integrating de novo and inherited variants in 42
ASD
Support
Prevalence and phenotypic impact of rare potentially damaging variants in autism spectrum disorder
ASD
Support
A Japanese adult and two girls with NEDMIAL caused by de novo missense variants in DHX30
Neurodevelopmental disorder with severe motor impa
DD, ID, autistic features
Support
ASD
DD
Support
Genotype-phenotype correlations and novel molecular insights into the DHX30-associated neurodevelopmental disorders
DD, ID
Autistic features, stereotypy, epilepsy/seizures
Support
ASD
DD, ID
Support
Genetic and phenotypic analysis of 101 patients with developmental delay or intellectual disability using whole-exome sequencing
DD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN987R001 
 missense_variant 
 c.1478G>A 
 p.Arg493His 
 De novo 
  
  
 GEN987R002 
 missense_variant 
 c.1478G>A 
 p.Arg493His 
 De novo 
  
  
 GEN987R003 
 missense_variant 
 c.1685A>G 
 p.His562Arg 
 De novo 
  
  
 GEN987R004 
 missense_variant 
 c.2342G>A 
 p.Gly781Asp 
 De novo 
  
  
 GEN987R005 
 missense_variant 
 c.2342G>A 
 p.Gly781Asp 
 De novo 
  
  
 GEN987R006 
 missense_variant 
 c.2260C>T 
 p.Arg754Trp 
 De novo 
  
  
 GEN987R007 
 missense_variant 
 c.2344C>T 
 p.Arg782Trp 
 De novo 
  
  
 GEN987R008 
 missense_variant 
 c.2344C>T 
 p.Arg782Trp 
 De novo 
  
  
 GEN987R009 
 missense_variant 
 c.2269C>T 
 p.Arg757Cys 
 De novo 
  
  
 GEN987R010 
 missense_variant 
 c.2353C>T 
 p.Arg785Cys 
 De novo 
  
  
 GEN987R011 
 missense_variant 
 c.2353C>T 
 p.Arg785Cys 
 De novo 
  
  
 GEN987R012 
 missense_variant 
 c.2354G>A 
 p.Arg785His 
 De novo 
  
  
 GEN987R013 
 frameshift_variant 
 c.2491+2dup 
  
 Familial 
 Maternal 
 Multiplex (monozygotic twins) 
 GEN987R014 
 missense_variant 
 c.2353C>T 
 p.Arg785Cys 
 De novo 
  
 Simplex 
 GEN987R015 
 missense_variant 
 c.1385G>A 
 p.Gly462Glu 
 De novo 
  
 Simplex 
 GEN987R016 
 missense_variant 
 c.1478G>A 
 p.Arg493His 
 Unknown 
  
 Simplex 
 GEN987R017 
 missense_variant 
 c.1685A>G 
 p.His562Arg 
 Unknown 
  
 Simplex 
 GEN987R018a 
 missense_variant 
 c.2174G>A 
 p.Arg725His 
 Unknown 
  
  
 GEN987R019 
 missense_variant 
 c.2201C>A 
 p.Ala734Asp 
 De novo 
  
 Simplex 
 GEN987R020 
 missense_variant 
 c.2201C>A 
 p.Ala734Asp 
 De novo 
  
 Simplex 
 GEN987R021 
 missense_variant 
 c.2215A>G 
 p.Thr739Ala 
 Unknown 
 Not maternal 
 Simplex 
 GEN987R022 
 missense_variant 
 c.2344C>T 
 p.Arg782Trp 
 Familial 
 Maternal 
 Multiplex 
 GEN987R023 
 missense_variant 
 c.2260C>T 
 p.Arg754Trp 
 De novo 
  
 Simplex 
 GEN987R024 
 missense_variant 
 c.2344C>T 
 p.Arg782Trp 
 De novo 
  
 Simplex 
 GEN987R025 
 missense_variant 
 c.2344C>T 
 p.Arg782Trp 
 De novo 
  
 Simplex 
 GEN987R026 
 missense_variant 
 c.2261G>A 
 p.Arg754Gln 
 De novo 
  
 Simplex 
 GEN987R027 
 missense_variant 
 c.2345G>A 
 p.Arg782Gln 
 De novo 
  
 Simplex 
 GEN987R028 
 missense_variant 
 c.2345G>A 
 p.Arg782Gln 
 De novo 
  
 Simplex 
 GEN987R029 
 missense_variant 
 c.2353C>T 
 p.Arg785Cys 
 Unknown 
  
  
 GEN987R030 
 missense_variant 
 c.2269C>T 
 p.Arg757Cys 
 De novo 
  
 Simplex 
 GEN987R031 
 missense_variant 
 c.2353C>T 
 p.Arg785Cys 
 De novo 
  
 Simplex 
 GEN987R032 
 missense_variant 
 c.2353C>T 
 p.Arg785Cys 
 De novo 
  
 Simplex 
 GEN987R033 
 missense_variant 
 c.2354G>A 
 p.Arg785His 
 De novo 
  
 Simplex 
 GEN987R034 
 missense_variant 
 c.2723G>A 
 p.Arg908Gln 
 De novo 
  
 Simplex 
 GEN987R035 
 frameshift_variant 
 c.347_360del 
 p.Ala116ValfsTer12 
 De novo 
  
 Simplex 
 GEN987R036 
 stop_gained 
 c.2389C>T 
 p.Arg797Ter 
 Familial 
 Maternal 
  
 GEN987R037 
 copy_number_loss 
  
  
 De novo 
  
 Simplex 
 GEN987R038 
 copy_number_loss 
  
  
 De novo 
  
 Simplex 
 GEN987R039 
 missense_variant 
 c.2345G>A 
 p.Arg782Gln 
 De novo 
  
 Simplex 
 GEN987R040 
 missense_variant 
 c.2354G>A 
 p.Arg785His 
 De novo 
  
 Simplex 
 GEN987R041 
 missense_variant 
 c.2353C>T 
 p.Arg785Cys 
 De novo 
  
 Simplex 
 GEN987R042 
 missense_variant 
 c.2631C>G 
 p.Ile877Met 
 Unknown 
  
  
 GEN987R043 
 missense_variant 
 c.1312C>T 
 p.Pro438Ser 
 De novo 
  
  
 GEN987R044 
 missense_variant 
 c.2387C>T 
 p.Pro796Leu 
 De novo 
  
 Simplex 
 GEN987R045 
 missense_variant 
 c.1186C>G 
 p.Arg396Gly 
 Familial 
 Paternal 
 Simplex 
 GEN987R046 
 missense_variant 
 c.1317T>G 
 p.His439Gln 
 Unknown 
  
 Simplex 
 GEN987R047 
 missense_variant 
 c.1022C>T 
 p.Thr341Ile 
 Familial 
 Maternal 
 Simplex 
 GEN987R048 
 missense_variant 
 c.1685A>G 
 p.His562Arg 
 Unknown 
  
 Simplex 
 GEN987R049 
 splice_site_variant 
 c.1846-1G>T 
  
 De novo 
  
 Simplex 
  et al.  

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
3
Deletion-Duplication
 17
 

No Animal Model Data Available

 

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