Summary Statistics:
ASD Reports: 4
Recent Reports: 1
Annotated variants: 3
Associated CNVs: 5
Evidence score: 3
Gene Score: 3
Relevance to Autism
De novo missense variants in the DENR gene were identified in two unrelated ASD probands (Neale et al., 2012; Haas et al., 2016); additional functional characterization of these variants in Haas et al., 2016 demonstrated effects on migration, dendritic branching, and dendritic spine properties of cortical neurons.
Molecular Function
This gene encodes a protein that is involved in mRNA translation initiation by promoting the recruitment of aminoacetyled initiator tRNA to P site of 40S ribosomes. Haas et al., 2016 demonstrated that DENR controls radial migration in the mouse brain through its binding partner MCTS1.
References
Primary
Patterns and rates of exonic de novo mutations in autism spectrum disorders.
ASD
Support
40S ribosome profiling reveals distinct roles for Tma20/Tma22 (MCT-1/DENR) and Tma64 (eIF2D) in 40S subunit recycling
ASD
Support
Contribution of rare and common variants to intellectual disability in a sub-isolate of Northern Finland.
ID
ASD
Recent Recommendation
De Novo Mutations in DENR Disrupt Neuronal Development and Link Congenital Neurological Disorders to Faulty mRNA Translation Re-initiation.
ASD
GEN825R001
missense_variant
c.110G>A
p.Cys37Tyr
De novo
Simplex
GEN825R002
missense_variant
c.362C>T
p.Pro121Leu
De novo
Simplex
GEN825R003
missense_variant
c.67T>G
p.Leu23Val
Unknown
No Common Variants Available
12
Deletion-Duplication
26
12
Deletion-Duplication
2
No Animal Model Data Available
Summary Statistics:
Total Interactions: 32
Total Publications: 2
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Interactor Symbol
Interactor Name
Interactor Organism
Entrez ID
Uniprot ID
Interaction Type
Evidence
Reference
AMZ2
archaelysin family metallopeptidase 2
51321
Q86W34
IP; LC-MS/MS
Huttlin EL , et al. 2015
ATG13
ATG13 autophagy related 13 homolog (S. cerevisiae)
9776
O75143
IP; LC-MS/MS
Huttlin EL , et al. 2015
BTBD1
BTB (POZ) domain containing 1
53339
Q9H0C5
IP; LC-MS/MS
Huttlin EL , et al. 2015
CDK5R1
cyclin-dependent kinase 5, regulatory subunit 1 (p35)
8851
Q15078
IP; LC-MS/MS
Huttlin EL , et al. 2015
CHGA
Chromogranin-A
P10645
IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS2
COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)
9318
P61201
IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)
51138
B3KST5
IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS5
COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)
10987
Q92905
IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS6
COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis)
10980
Q7L5N1
IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS7A
COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)
50813
Q9UBW8
IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS7B
COP9 signalosome subunit 7B
64708
Q9H9Q2
IP; LC-MS/MS
Huttlin EL , et al. 2015
DHTKD1
dehydrogenase E1 and transketolase domain containing 1
55526
Q96HY7
IP; LC-MS/MS
Huttlin EL , et al. 2015
DOCK11
dedicator of cytokinesis 11
139818
Q5JSL3
IP; LC-MS/MS
Huttlin EL , et al. 2015
FGB
fibrinogen beta chain
2244
P02675
IP; LC-MS/MS
Huttlin EL , et al. 2015
FSD1
fibronectin type III and SPRY domain containing 1
79187
Q9BTV5
IP; LC-MS/MS
Huttlin EL , et al. 2015
MAPT
microtubule-associated protein tau
4137
P10636
IP; LC-MS/MS
Huttlin EL , et al. 2015
MCTS1
Malignant T-cell-amplified sequence 1
Q9ULC4-2
IP; LC-MS/MS
Huttlin EL , et al. 2015
METTL11A
N-terminal Xaa-Pro-Lys N-methyltransferase 1
28989
Q9BV86
IP; LC-MS/MS
Huttlin EL , et al. 2015
NFKBIA
nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
NM_020529
P25963
IP; LC-MS/MS
Huttlin EL , et al. 2015
NSUN4
NOP2/Sun domain family, member 4
387338
A8K8I8
IP; LC-MS/MS
Huttlin EL , et al. 2015
NUDT6
Nucleoside diphosphate-linked moiety X motif 6
P53370
IP; LC-MS/MS
Huttlin EL , et al. 2015
OXNAD1
oxidoreductase NAD-binding domain containing 1
92106
Q96HP4
IP; LC-MS/MS
Huttlin EL , et al. 2015
PDK1
pyruvate dehydrogenase kinase, isozyme 1
NM_002610
Q15118
IP; LC-MS/MS
Huttlin EL , et al. 2015
PDLIM5
PDZ and LIM domain 5
10611
Q96HC4
IP; LC-MS/MS
Huttlin EL , et al. 2015
RB1CC1
RB1-inducible coiled-coil 1
9821
Q8TDY2
IP; LC-MS/MS
Huttlin EL , et al. 2015
RWDD2B
RWD domain containing 2B
10069
P57060
IP; LC-MS/MS
Huttlin EL , et al. 2015
SLC25A32
solute carrier family 25 (mitochondrial folate carrier) , member 32
81034
Q9H2D1
IP; LC-MS/MS
Huttlin EL , et al. 2015
SNRNP27
small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
11017
A8K513
IP; LC-MS/MS
Huttlin EL , et al. 2015
TALDO1
transaldolase 1
6888
P37837
IP; LC-MS/MS
Huttlin EL , et al. 2015
USP47
ubiquitin specific peptidase 47
55031
Q96K76
IP; LC-MS/MS
Huttlin EL , et al. 2015
VDAC2
voltage-dependent anion channel 2
7417
P45880
IP; LC-MS/MS
Huttlin EL , et al. 2015
Mcts1
malignant T cell amplified sequence 1
68995
Q9DB27
IP/WB; Co-localization
Haas MA , et al. 2016