Summary Statistics:
ASD Reports: 7
Recent Reports: 1
Annotated variants: 38
Associated CNVs: 12
Evidence score: null
Gene Score: 4
Relevance to Autism
Rare deletions involving the DDX53 gene have been identified in individuals with ASD (Pinto et al., 2010; Prasad et al., 2012; Nava et al., 2014). More recently, Scala et al., 2024 identified 10 individuals with ASD from 8 unrelated families, including three individuals from two families from the SPARK cohort, carrying rare, predicted damaging or loss-of-function variants in DDX53; they subsequently reported an additional 23 individuals with ASD from the SPARK and MSSNG cohorts carrying mostly maternally-inherited, rare, damaging DDX53 variants.
Molecular Function
This intronless gene encodes a protein which contains several domains found in members of the DEAD-box helicase protein family. Other members of this protein family participate in ATP-dependent RNA unwinding.
References
Primary
Functional impact of global rare copy number variation in autism spectrum disorders.
ASD
Support
A discovery resource of rare copy number variations in individuals with autism spectrum disorder.
ASD
Support
Unveiling genetic insights: Array-CGH and WES discoveries in a cohort of 122 children with essential autism spectrum disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Prospective diagnostic analysis of copy number variants using SNP microarrays in individuals with autism spectrum disorders.
ASD
ID
Recent Recommendation
Genetic variants in DDX53 contribute to autism spectrum disorder associated with the Xp22.11 locus
ASD
ADHD, DD, ID, epilepsy/seizures
GEN332R001
copy_number_loss
Familial
Maternal
Multiplex
GEN332R002
copy_number_loss
Familial
Maternal
Multiplex
GEN332R003
copy_number_loss
Familial
Maternal
Multiplex
GEN332R004
copy_number_loss
Familial
Maternal
Multiplex
GEN332R005
copy_number_loss
Familial
Maternal
Simplex
GEN332R006
copy_number_loss
Unknown
Unknown
GEN332R007
copy_number_loss
Familial
Maternal
Simplex
GEN332R008
synonymous_variant
c.864A>C
p.Pro288=
De novo
GEN332R009
frameshift_variant
c.530_549del
p.Asn177SerfsTer7
Familial
Maternal
GEN332R010
missense_variant
c.871A>G
p.Arg291Gly
Familial
Maternal
Simplex
GEN332R011
missense_variant
c.834G>A
p.Met278Ile
Familial
Maternal
Simplex
GEN332R012
frameshift_variant
c.567_568insTGCAGGT
p.Glu190CysfsTer3
Familial
Maternal
Multiplex
GEN332R013
missense_variant
c.977G>A
p.Ser326Asn
Familial
Maternal
Simplex
GEN332R014
missense_variant
c.1736C>T
p.Ala579Val
Familial
Maternal
Multiplex
GEN332R015
missense_variant
c.259G>T
p.Gly87Trp
Familial
Maternal
Simplex
GEN332R016
missense_variant
c.594G>T
p.Lys198Asn
Familial
Maternal
Simplex
GEN332R017
copy_number_loss
Familial
Maternal
Simplex
GEN332R018
stop_gained
c.24G>A
p.Trp8Ter
Unknown
Simplex
GEN332R019
missense_variant
c.635A>G
p.Glu212Gly
Familial
Maternal
Simplex
GEN332R020
missense_variant
c.812G>A
p.Gly271Glu
Familial
Maternal
Simplex
GEN332R021
missense_variant
c.812G>A
p.Gly271Glu
Familial
Maternal
Simplex
GEN332R022
missense_variant
c.844A>T
p.Ile282Phe
Unknown
Simplex
GEN332R023
missense_variant
c.1043T>C
p.Ile348Thr
Familial
Maternal
Simplex
GEN332R024
missense_variant
c.1073A>G
p.Asp358Gly
Familial
Maternal
Simplex
GEN332R025
missense_variant
c.1112C>T
p.Thr371Ile
Unknown
Simplex
GEN332R026
missense_variant
c.1132G>A
p.Ala378Thr
Unknown
Simplex
GEN332R027
inframe_indel
c.1143_1144delGCinsTA
p.Met381_Leu382delinsIleMet
Familial
Maternal
Simplex
GEN332R028
missense_variant
c.1303C>A
p.Leu435Ile
Unknown
Simplex
GEN332R029
missense_variant
c.1342A>C
p.Thr448Pro
Familial
Maternal
Simplex
GEN332R030
missense_variant
c.1736C>T
p.Ala579Val
Unknown
Simplex
GEN332R031
inframe_deletion
c.1771_1773del
p.Gln591del
Unknown
Multiplex
GEN332R032
copy_number_loss
Familial
Maternal
Simplex
GEN332R033
copy_number_loss
Familial
Maternal
Unknown
GEN332R034
copy_number_loss
Familial
Maternal
Simplex
GEN332R035
copy_number_loss
Unknown
Simplex
GEN332R036
copy_number_loss
Familial
Maternal
Multiplex
GEN332R037
missense_variant
c.1678C>T
p.Arg560Trp
Familial
Maternal
GEN332R038
missense_variant
c.543A>C
p.Glu181Asp
Familial
Maternal
No Common Variants Available
X
Deletion-Duplication
19
X
Deletion-Duplication
22
No Animal Model Data Available
Summary Statistics:
Total Interactions: 5
Total Publications: 3
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