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Relevance to Autism

Two de novo loss-of-function (LoF) mutations (both nonsense variants) were reported in the CUL3 gene in unrelated ASD cases (PMIDs 22495309 and 22914163). Analysis of rare coding variation in 3,871 ASD cases and 9,937 ancestry-matched or paternal controls from the Autism Sequencing Consortium (ASC) in De Rubeis et al., 2014 identified CUL3 as a gene meeting high statistical significance with a FDR 0.01, meaning that this gene had a 99% chance of being a true autism gene (PMID 25363760). A third de novo LoF variant in CUL3 was identified in a Chinese ASD proband from the Autism Clinical and Genetic Resources in China (ACGC) cohort in Wang et al., 2016 (PMID 27824329). A two-stage analysis of rare de novo and inherited coding variants in 42,607 ASD cases, including 35,130 new cases from the SPARK cohort, in Zhou et al., 2022 identified CUL3 as a gene reaching exome-wide significance (P < 2.5E-06).

Molecular Function

This gene encodes a member of the cullin protein family. The encoded protein plays a critical role in the polyubiquitination and subsequent degradation of specific protein substrates as the core component and scaffold protein of an E3 ubiquitin ligase complex. Complexes including the encoded protein may also play a role in late endosome maturation.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.
ASD
Positive Association
Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection.
SCZ
Support
Rate of de novo mutations and the importance of father's age to disease risk.
ASD, SCZ
Support
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD
Support
ASD
Support
Meta-Analyses Support Previous and Novel Autism Candidate Genes: Outcomes of an Unexplored Brazilian Cohort.
ASD
Support
Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics.
Support
Integrating de novo and inherited variants in 42
ASD
Support
Targeted sequencing identifies 91 neurodevelopmental-disorder risk genes with autism and developmental-disability biases.
ASD
Support
ASD, schizophrenia
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
Rare variants in the outcome of social skills group training for autism
ASD
Support
The genomic landscape of balanced cytogenetic abnormalities associated with human congenital anomalies.
DD, ID
Support
Cul3 and insomniac are required for rapid ubiquitination of postsynaptic targets and retrograde homeostatic signaling.
Support
Prevalence and phenotypic impact of rare potentially damaging variants in autism spectrum disorder
ASD
Support
De novo genic mutations among a Chinese autism spectrum disorder cohort.
ASD
Support
Autism-associated missense genetic variants impact locomotion and neurodevelopment in Caenorhabditis elegans.
ASD
Support
Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development
ASD
Support
Integrated analysis of whole-exome sequencing and transcriptome profiling in males with autism spectrum disorders.
ASD
Support
ASD, DD, epilepsy/seizures
Support
Whole genome sequencing and variant discovery in the ASPIRE autism spectrum disorder cohort.
ASD
Support
Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders
ASD, DD
Support
Large-scale discovery of novel genetic causes of developmental disorders.
Unknown diagnosis
Support
Inherited and multiple de novo mutations in autism/developmental delay risk genes suggest a multifactorial model.
ASD
Support
De novo variants in CUL3 are associated with global developmental delays with or without infantile spasms
DD
ID, epilepsy/seizures
Recent Recommendation
ASD
Recent Recommendation
Regulation of the CUL3Ubiquitin Ligase by a Calcium-Dependent Co-adaptor.
Recent Recommendation
Low load for disruptive mutations in autism genes and their biased transmission.
ASD
Recent Recommendation
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Recent Recommendation
Kelch-like 3 and Cullin 3 regulate electrolyte homeostasis via ubiquitination and degradation of WNK4.
Recent Recommendation
Structural basis for Cul3 protein assembly with the BTB-Kelch family of E3 ubiquitin ligases.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN409R001 
 stop_gained 
 c.736G>T 
 p.Glu246Ter 
 De novo 
  
 Simplex 
 GEN409R002 
 stop_gained 
 c.1636C>T 
 p.Arg546Ter 
 De novo 
  
  
 GEN409R003 
 missense_variant 
 c.50T>G 
 p.Val17Gly 
 Familial 
 Paternal 
 Simplex 
 GEN409R004 
 stop_gained 
 c.541C>T 
 p.Arg181Ter 
 Unknown 
  
 Unknown 
 GEN409R005 
 splice_site_variant 
 c.1644+2T>C 
  
 Unknown 
  
 Unknown 
 GEN409R006 
 missense_variant 
 c.964C>G 
 p.Leu322Val 
 Unknown 
  
 Unknown 
 GEN409R007 
 missense_variant 
 c.46G>T 
 p.Asp16Tyr 
 Unknown 
  
 Unknown 
 GEN409R008 
 missense_variant 
 c.830A>G 
 p.Lys277Arg 
 Unknown 
  
 Unknown 
 GEN409R009 
 frameshift_variant 
 c.2004del 
 p.Leu669TyrfsTer33 
 De novo 
  
 Unknown 
 GEN409R010 
 synonymous_variant 
 c.531C>A 
 p.Val177= 
 De novo 
  
 Unknown 
 GEN409R011 
 missense_variant 
 c.2156A>G 
 p.His719Arg 
 De novo 
  
 Simplex 
 GEN409R012 
 splice_site_variant 
 c.793G>T 
 p.Glu265Ter 
 De novo 
  
  
 GEN409R013 
 translocation 
  
  
 De novo 
  
  
 GEN409R014 
 frameshift_variant 
 c.171_179delinsCGAAG 
 p.Met58GlufsTer20 
 De novo 
  
 Simplex 
 GEN409R015 
 splice_site_variant 
 T>C 
 p.? 
 Familial 
  
 Multiplex 
 GEN409R016 
 frameshift_variant 
 c.392_395del 
 p.Gly131AspfsTer28 
 Unknown 
  
 Simplex 
 GEN409R017 
 missense_variant 
 c.1961C>T 
 p.Pro654Leu 
 De novo 
  
 Simplex 
 GEN409R018 
 missense_variant 
 c.67-22109A>G 
  
 Unknown 
  
 Simplex 
 GEN409R019 
 splice_site_variant 
 c.832-2A>G 
  
 Familial 
 Paternal 
 Multiplex 
 GEN409R020 
 stop_gained 
 c.398C>G 
 p.Ser133Ter 
 De novo 
  
 Simplex 
 GEN409R021 
 missense_variant 
 c.854T>C 
 p.Val285Ala 
 De novo 
  
  
 GEN409R022 
 frameshift_variant 
 c.67-22145del 
  
 De novo 
  
  
 GEN409R023 
 frameshift_variant 
 c.1239del 
 p.Asp413GlufsTer42 
 De novo 
  
  
 GEN409R024 
 frameshift_variant 
 c.1351_1354del 
 p.Ser451ProfsTer23 
 De novo 
  
  
 GEN409R025 
 splice_site_variant 
 c.1008+1G>T 
  
 De novo 
  
  
 GEN409R026 
 frameshift_variant 
 c.917del 
 p.Gly306ValfsTer25 
 De novo 
  
  
 GEN409R027 
 frameshift_variant 
 c.342_343del 
 p.Gly115ArgfsTer21 
 De novo 
  
  
 GEN409R028 
 frameshift_variant 
 c.235_238del 
 p.Ile79PhefsTer23 
 De novo 
  
  
 GEN409R029 
 frameshift_variant 
 c.2028_2029del 
 p.His676GlnfsTer13 
 Unknown 
  
  
 GEN409R030 
 stop_gained 
 c.757C>T 
 p.Arg253Ter 
 Unknown 
  
  
 GEN409R031 
 missense_variant 
 c.475C>T 
 p.Arg159Cys 
 Unknown 
  
  
 GEN409R032 
 missense_variant 
 c.1802C>T 
 p.Ser601Phe 
 Unknown 
  
  
 GEN409R033 
 frameshift_variant 
 c.521del 
 p.Met174ArgfsTer11 
 Unknown 
  
  
 GEN409R034 
 frameshift_variant 
 c.521del 
 p.Met174ArgfsTer11 
 Unknown 
  
  
 GEN409R035 
 stop_gained 
 c.1654C>T 
 p.Arg552Ter 
 Unknown 
  
  
 GEN409R036 
 stop_gained 
 c.614C>G 
 p.Ser205Ter 
 Unknown 
  
  
 GEN409R037 
 frameshift_variant 
 c.1595dup 
 p.Ala533SerfsTer7 
 Unknown 
  
  
 GEN409R038 
 missense_variant 
 c.320T>C 
 p.Phe107Ser 
 Unknown 
  
  
 GEN409R039 
 missense_variant 
 c.1327G>A 
 p.Ala443Thr 
 Unknown 
  
  
 GEN409R040 
 missense_variant 
 c.185G>A 
 p.Arg62His 
 Unknown 
  
  
 GEN409R041 
 missense_variant 
 c.2110G>A 
 p.Asp704Asn 
 Unknown 
  
  
 GEN409R042 
 missense_variant 
 c.245G>A 
 p.Arg82Gln 
 Unknown 
  
  
 GEN409R043 
 missense_variant 
 c.245G>A 
 p.Arg82Gln 
 Unknown 
  
  
 GEN409R044 
 missense_variant 
 c.245G>A 
 p.Arg82Gln 
 Unknown 
  
  
 GEN409R045 
 missense_variant 
 c.1046A>G 
 p.Gln349Arg 
 Unknown 
  
  
 GEN409R046 
 stop_gained 
 c.571G>T 
 p.Glu191Ter 
 Unknown 
  
  
 GEN409R047 
 missense_variant 
 c.1669C>A 
 p.Pro557Thr 
 Unknown 
  
  
 GEN409R048 
 missense_variant 
 c.190A>G 
 p.Met64Val 
 De novo 
  
  
 GEN409R049 
 synonymous_variant 
 c.1443C>T 
 p.Asn481%3D 
 De novo 
  
 Simplex 
 GEN409R050 
 missense_variant 
 c.2281C>T 
 p.Arg761Cys 
 De novo 
  
  
 GEN409R051 
 missense_variant 
 c.1661T>C 
 p.Leu554Pro 
 De novo 
  
  
 GEN409R052 
 stop_gained 
 c.1550C>G 
 p.Ser517Ter 
 De novo 
  
  
 GEN409R053 
 splice_site_variant 
 c.379-2A>G 
  
 De novo 
  
  
 GEN409R054 
 stop_gained 
 c.2065A>T 
 p.Lys689Ter 
 De novo 
  
 Simplex 
 GEN409R055 
 frameshift_variant 
 c.713_714insGT 
 p.Lys241Ter 
 Familial 
 Maternal 
 Multiplex 

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN409C001 
 intron_variant 
 rs11685299 
 c.180+8949G>T;c.396+8949G>T;c.378+8949G>T;c.-186+8949G>T;c.345+8949G>T;c.232-11807G>T;c.336+8949G>T; 
  
 40,675 SCZ cases and 64,643 controls (CLOZUK and independent PGC datasets) 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
2
Duplication
 1
 
2
Duplication
 1
 
2
Duplication
 1
 
2
Deletion-Duplication
 1
 
2
Deletion
 2
 
2
Duplication
 2
 
2
Duplication
 1
 
2
Deletion
 5
 

Model Summary

Cul3 null mice are embryonic lethal and the abnormalies start at E6.5. Cells in extraembryonic ectoderm and ectoplacental cone exhibit prolonged S phase in cell cycle, which supports that Cul3 might regulate the turnover of Cycline E. Cul3 hets have abnormal cardiovescular function, renal function, and hyperkalaemia.

References

Type
Title
Author, Year
Cullin-3 targets cyclin E for ubiquitination and controls S phase in mammalian cells.
Characterisation of the Cullin-3 mutation that causes a severe form of familial hypertension and hyperkalaemia.
Additional
Behavioral, circuitry, and molecular aberrations by region-specific deficiency of the high-risk autism gene Cul3.
Additional
CUL3 Deficiency Causes Social Deficits and Anxiety-like Behaviors by Impairing Excitation-Inhibition Balance Through the Promotion of Cap-Dependent Translation
Additional
Autism-linked Cullin3 germline haploinsufficiency impacts cytoskeletal dynamics and cortical neurogenesis through RhoA signaling

M_CUL3_3_KO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: Exon sequence corresponding to amino acids 127-293 of Cul3 was deleted and replaced with neomycin gene driven by the PGK promoter, which resulted in a null allele.
Allele Type: Targeted (knockout)
Strain of Origin: Not specified
Genetic Background: C57/B6J; 129/Sv
ES Cell Line: 129/Sv
Mutant ES Cell Line: Not specified
Model Source: Not specified

M_CUL3_2_KO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: Exon 9 of Cullin3, flanked by flippase-recognition target (FRT) sites, was removed by Flp recombinase, which resulted in Cul3 (amino acids 403-459) truncated product.
Allele Type: Targeted (knockin)
Strain of Origin: C57BL/6N
Genetic Background: C57BL/6J
ES Cell Line: Not specified
Mutant ES Cell Line: Not specified
Model Source: Taconic

M_CUL3_2_KO_HT

Model Type: Genetic
Model Genotype: Heterozygous
Mutation: Exon 9 of Cullin3, flanked by flippase-recognition target (FRT) sites, was removed by Flp recombinase, which resulted in Cul3 (amino acids 403-459) truncated product.
Allele Type: Targeted (knockin)
Strain of Origin: C57BL/6N
Genetic Background: C57BL/6J
ES Cell Line: Not specified
Mutant ES Cell Line: Not specified
Model Source: Taconic

M_CUL3_4_CKO_HT

Model Type: Genetic
Model Genotype: Heterozygous
Mutation: Cul3^flox/fox mice from Jackson Laboratory (stock no.: 028349) with exons 4 to 7 flanked by loxp sites were bred with Emx1-IRES-Cre knockin mice (stock no.: 005628) to generate forebrain-specific Cul3 heterozygous knockout mice (Emx1Cre/+; Cul3^f/+ or Cul3^f/) converting a hypomorphic allele to a null allele after Cre recombination. Emx1 directs Cul3 KO in cortical excitatory glutamatergic neurons, but not inhibitory GABAergic interneurons, and other forebrain structures, including the hippocampus and amygdala.
Allele Type: Conditonal knockout
Strain of Origin: C57BL/6J
Genetic Background: C57BL/6J
ES Cell Line:
Mutant ES Cell Line:
Model Source: Jackson laboratory

M_CUL3_5_CKO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: Cul3^flox/fox mice from Jackson Laboratory (stock no.: 028349) with exons 4 to 7 flanked by loxp sites were bred with Emx1-IRES-Cre knockin mice (stock no.: 005628) to generate forebrain-specific Cul3 homozygous knockout mice, converting a hypomorphic allele to a null allele after Cre recombination. Emx1 directs Cul3 KO in cortical excitatory glutamatergic neurons, but not inhibitory GABAergic interneurons, and other forebrain structures, including the hippocampus and amygdala.
Allele Type: Conditonal knockout
Strain of Origin: C57BL/6J
Genetic Background: C57BL/6J
ES Cell Line:
Mutant ES Cell Line:
Model Source: Jackson laboratory

M_CUL3_6_CKO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: Cul3^flox/fox mice were crossed with either AAV8-CaMKIIalpha-GFPCre or AAV8-CaMKIIalpha-GFP (control) in the PFC.
Allele Type: Conditonal knockout
Strain of Origin: C57BL/6J
Genetic Background: C57BL/6J
ES Cell Line:
Mutant ES Cell Line:
Model Source: Jackson laboratory

M_CUL3_7_CKO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: Cul3^flox/fox mice were stereotaxically injected bilaterally with either AAV8-CaMKIIa-GFPCre or AAV8-CaMKIIa-GFP (control) in the dorsal striatum.
Allele Type: Conditonal knockout
Strain of Origin: C57BL/6J
Genetic Background: C57BL/6J
ES Cell Line:
Mutant ES Cell Line:
Model Source: Jackson laboratory

M_CUL3_10_CKO_HT

Model Type: Genetic
Model Genotype: Heterozygous
Mutation: Mice with selective deletion of Cul3 exons 4 to 7 in the pyramidal neurons of the dorsal telencephalon, neocortex, and hippocampus were generated by crossing conditional ready Cul3 mice (Jackson Laboratory stock no 028349) with heterozygous Nex Cre transgenic mice where Cre expression begins at embryonic day 11.5.
Allele Type: Conditonal knockout
Strain of Origin: C57BL/6J
Genetic Background: C57BL/6J
ES Cell Line:
Mutant ES Cell Line:
Model Source: Jackson laboratory; Dr. Klaus-Armin Nave, Max Planck Institute (Goebbels et al., 2006, PMID 17146780 ) (Nex-Cre)

M_CUL3_11_CKO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: Mice with selective deletion of Cul3 exons 4 to 7 in the pyramidal neurons of the dorsal telencephalon, neocortex, and hippocampus were generated by crossing conditional ready Cul3 mice (Jackson Laboratory stock no 028349) with heterozygous Nex Cre transgenic mice where Cre expression begins at embryonic day 11.5.
Allele Type: Conditonal knockout
Strain of Origin: C57BL/6J
Genetic Background: C57BL/6J
ES Cell Line:
Mutant ES Cell Line:
Model Source: Jackson laboratory; Dr. Klaus-Armin Nave, Max Planck Institute (Goebbels et al., 2006, PMID 17146780 ) (Nex-Cre)

M_CUL3_8_CKO_HT

Model Type: Genetic
Model Genotype: Heterozygous
Mutation: Mice with selective deletion of Cul3 exons 4 to 7 in the central nervous system, including astrocytes, oligodendroglia, ependyma and some neurons were generated by crossing conditional ready Cul3 mice (Jackson Laboratory stock no 028349) with GFAP Cre transgenic mice (Jackson Laboratory stock no 004600).
Allele Type: Conditonal knockout
Strain of Origin: C57BL/6J
Genetic Background: C57BL/6J
ES Cell Line:
Mutant ES Cell Line:
Model Source: Jackson laboratory

M_CUL3_9_CKO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: Mice with selective deletion of Cul3 exons 4 to 7 in the central nervous system, including astrocytes, oligodendroglia, ependyma and some neurons were generated by crossing conditional ready Cul3 mice (Jackson Laboratory stock no 028349) with heterozygous GFAP Cre transgenic mice (Jackson Laboratory stock no 004600).
Allele Type: Conditonal knockout
Strain of Origin: C57BL/6J
Genetic Background: C57BL/6J
ES Cell Line:
Mutant ES Cell Line:
Model Source: Jackson laboratory

M_CUL3_12_KO_HT

Model Type: Genetic LOF
Model Genotype: Heterozygous
Mutation: Happloinsufficient mouse line generated using crispr/cas9 genome editing to introduce a 1-bp insertion in exon 6 at the locus of an asd mutation e246x (p.glu246stop).
Allele Type: Knockout
Strain of Origin: C57BL/6N
Genetic Background: C57BL/6N
ES Cell Line: C57BL/6N
Mutant ES Cell Line: C57BL/6N
Model Source: Amar M, et al, Mol Psych, 2021

M_CUL3_3_KO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Size/growth1
Decreased
Description: E6.5 cul3 null embryos were smaller and were abnormal in patterning both in the embryonic and extraembryonic tissues; e7.5 cul3 null embryos showed complete disorganized extraembryonic tissues (the absence of an amnion and absence of the extraembryonic cavities), abnormally developed trophectoderm (more sparsely represented trophoblast giant cells), and abnormal gastrulation (no evidence for the presence of embryonic mesoderm and endoderm)
Exp Paradigm: The extraembryonic tissues were identified by rna in situ hybridization with a probe for the h19 gene; the trophectoderm was identified by staining with anti-troma-1 antibodies
 Immunostaining
 E6.5-e7.5
Mortality/lethality: embryonic1
Increased
Description: No systematic abnormalities were observed in mutant embryos until e7.5. no homozygous mutant mice were born from heterozygous intercrosses while cul3+/+ and cul3+/- pups were obtained at the expected ratios
Exp Paradigm: General observations
 General observations
 P1
Protein expression: in situ protein expression1
Increased
Description: Increased protein levels of cyclin e in the majority of cells in the ectoplacental cone and the extraembryonic ectoderm
Exp Paradigm: Immunstaining
 Immunostaining
 E7.5
Cell proliferation1
Abnormal
Description: Increased number of cells synthesizing dna in the extraembryonic ectoderm and ectoplacental cone of the cul3 null embryos
Exp Paradigm: Pregnant mice were ip injected with brdu and the embryos were removed after 4 hours
 Immunostaining
 E7.5
 Not Reported: Circadian sleep/wake cycle, Communications, Emotion, Immune response, Learning & memory, Maternal behavior, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior

M_CUL3_2_KO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Mortality/lethality1
Increased
Description: No homozygous mutant mice were born from heterozygous mating pairs
Exp Paradigm: General observations
 General observations
 P1
 Not Reported: Circadian sleep/wake cycle, Communications, Emotion, Immune response, Learning & memory, Maternal behavior, Molecular profile, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior

M_CUL3_2_KO_HT

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Muscle fiber contraction1
Increased
Description: Increased vascular smooth muscle contractivity in the mutant mice
Exp Paradigm: The in vivo vasoconstrictor responses to intravenous injection of phenylephrine and angiotensin ii was examined
 In vivo vasoconstrictor response assay
 Unreported
Hormone levels1
Increased
Description: Increased aldosterone levels driven by the hyperkalaemia without pronounced hypervolaemia was observed in the mutant mice
Exp Paradigm: Htrf (homogeneous time-resolved fluorescence) aldosterone assay
 Blood chemistry
 Unreported
Renal function1
Decreased
Description: Hyperkalaemia, hyperchloraemia with a compensated metabolic acidosis, hypermagnesaemia, and hyperphosphataemia were observed in the mutant mice
Exp Paradigm: Plasma-optical emission spectrometry
 Urine/blood electrolyte analysis
 Unreported
Cardiovascular development and function1
Decreased
Description: Increased thickness of aorta vessel wall as well as increased blood pressure with augmented systolic aortic pressure wave and slower diastolic relaxation in the mutant mice relative to wild-type controls
Exp Paradigm: Morphometric analysis-voxel based morphometry
 Voxel based morphometry
 Unreported
Cardiovascular development and function1
Decreased
Description: Increased thickness of aorta vessel wall as well as increased blood pressure with augmented systolic aortic pressure wave and slower diastolic relaxation in the mutant mice relative to wild-type controls
Exp Paradigm: Morphometric analysis- blood pressure measurement
 Blood pressure measurement
 Unreported
Size/growth1
Decreased
Description: Decreased body weight and body length in the mutant mice related to wild-type controls
Exp Paradigm: Morphometric analysis
 Voxel based morphometry
 Unreported
Protein expression: in situ protein expression1
Abnormal
Description: Wnk4 and spak showed punctate staining appearance in the dct, but not in adjacent segments of the nephron including the thick ascending limb
Exp Paradigm: Immunostaining
 Immunostaining
 Unreported
Protein expression level evidence1
Increased
Description: Increased phosphorylated mypt1 levels in the mutant aorta extracts
Exp Paradigm: Immunostaining
 Immunostaining
 Unreported
Targeted expression1
Decreased
Description: Truncated cul3 (pha2e form) was less abundant than full-length cul3 in the heterozygous whole kidney lysate; decreased cul3 protein levels in the mutant aorta extracts
Exp Paradigm: Western blot by using kidney lysate collected from mice after a minimum 4-h fast
 Western blot
 Unreported
Signaling1
Increased
Description: Increased protein levels of wnk4 and ncc as well as increased levels of phosphorylated spak (thr373-p) and ncc (thr60-p) in the mutant whole kidney lysate
Exp Paradigm: Signaling: wnk kinase pathway; western blot by using kidney lysate collected from mice after a minimum 4-h fast
 Western blot
 Unreported
Protein expression level evidence1
 No change
 Western blot
 Unreported
Protein expression: in situ protein expression1
 No change
 Immunostaining
 Unreported
 Not Reported: Circadian sleep/wake cycle, Communications, Emotion, Immune response, Learning & memory, Maternal behavior, Motor phenotype, Neuroanatomy / ultrastructure / cytoarchitecture, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior

M_CUL3_4_CKO_HT

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
General locomotor activity: ambulatory activity1
Increased
Description: Heterozygous mutants show increased locomotion.
Exp Paradigm: NA
 Open field test
 6 weeks
Dendritic architecture: spine morphology1
Decreased
Description: Mutants show decrease in the density of thin dendritic spines and a trend for reduction in density of mushroom spines in the prefrontal cortex.
Exp Paradigm: NA
 Golgi-cox staining
 6 weeks
Dendritic architecture: spine density1
Decreased
Description: Mutants show decrease in the total spine density in the layer 5 pfc pyramidal neurons.
Exp Paradigm: NA
 Golgi-cox staining
 6 weeks
Brain size1
Ameliorated
Description: Temp
Exp Paradigm: NA
 16s rrna gene sequence analysis for identification of bacteria
 P6
Neuroreceptor levels: glutamate receptors: nmda receptors1
Decreased
Description: Mutants show decrease in nr1 subunits in frontal cortical tissues synaptic fraction but no change in synaptosomal nr2a and nr2b subunits.
Exp Paradigm: NA
 Western blot
 6 weeks
Presynaptic function: paired-pulse depression (ppd)1
Decreased
Description: Mutants show decrease in paired-pulse inhibition at three prepulse intensities of 70, 76 and 85 db.
Exp Paradigm: NA
 Whole-cell patch clamp
 6 weeks
Miniature post synaptic current amplitude: excitatory1
Decreased
Description: Mutants show amplitudes of nmdar-mediated excitatory postsynaptic currents (epsc) evoked by a series of stimulus intensities from 20 to 100 microamperes in the frontal cortical pyramidal neurons were decreased.
Exp Paradigm: NA
 Whole-cell patch clamp
 6 weeks
Sensorimotor gating1
Decreased
Description: Heterozygous mutants show decrease in percent prepulse inhibition at 85db prepulse intensity but not at 70db or 76db prepulse intensity.
Exp Paradigm: NA
 Prepulse inhibition
 6 weeks
Social memory1
Decreased
Description: Heterozygous mutants show decrease in time spent investigating a novel social stimulus over a familiar social stimulus.
Exp Paradigm: NA
 Three-chamber social approach test
 6 weeks
Social interaction1
Decreased
Description: Heterozygous mutants show decrease in time spent approaching and interacting with the social stimulus.
Exp Paradigm: NA
 Reciprocal social interaction test
 6 weeks
Social approach1
Decreased
Description: Heterozygous mutants show decrease in time spent investigating a social stimulus over a non-social stimulus.
Exp Paradigm: NA
 Three-chamber social approach test
 6 weeks
Protein expression level evidence1
Abnormal
Description: Mutants show 15 upregulated and 29 downregulated proteins in frontal cortex with differentially expressed proteins enriched in processes like protein methylation and maintenance of protein location. mutants show upregulation of smyd3.
Exp Paradigm: NA
 Liquid chromatography-mass spectrometry (lc-ms)
 6 weeks
Targeted expression1
Decreased
Description: Heterozygous mutants show decrease in cul3 protein levels in the frontal cortical neurons of the cortex and hippocampus but not in the striatum.
Exp Paradigm: NA
 Immunostaining
 6 weeks
Dna methylation1
Increased
Description: Mutants show increase in h3k4me3 in the pfc.
Exp Paradigm: NA
 Western blot
 6 weeks
Targeted expression1
Decreased
Description: Heterozygous mutants show decrease in cul3 protein levels in the frontal cortex, and hippocampus but not in the striatum.
Exp Paradigm: NA
 Western blot
 6 weeks
Protein expression level evidence1
Increased
Description: Mutants show increase in levels of rhoa and smyd3 in the frontal cortex. mutants show increase in smyd3 protein in frontal cortical tissues.
Exp Paradigm: NA
 Western blot
 6 weeks
Mortality/lethality1
 No change
 General observations
 6-7 weeks
Size/growth1
 No change
 Body weight measurement
 P6, 5 weeks
Anxiety1
 No change
 Open field test
 6 weeks
Gene expression1
 No change
 Semi-quantitative pcr (qrt-pcr)
 6 weeks
Protein expression level evidence1
 No change
 Western blot
 6 weeks
Motor coordination and balance1
 No change
 Accelerating rotarod test
 6 weeks
Motor learning1
 No change
 Accelerating rotarod test
 6 weeks
Brain size1
 No change
 Gross necroscopy
 P6
Cytoskeletal organization: neuronal1
 No change
 Immunostaining
 6 weeks
Dendritic architecture: dendritic length1
 No change
 Golgi-cox staining
 6 weeks
Dendritic architecture: dendritic tree complexity1
 No change
 Golgi-cox staining
 6 weeks
Decay kinetics of miniature post synaptic currents1
 No change
 Whole-cell patch clamp
 6 weeks
Epsp-spike relationship1
 No change
 Whole-cell patch clamp
 6 weeks
Membrane potential1
 No change
 Whole-cell patch clamp
 6 weeks
Miniature post synaptic current amplitude: excitatory1
 No change
 Whole-cell patch clamp
 6 weeks
Presynaptic function: paired-pulse facilitation1
 No change
 Whole-cell patch clamp
 6 weeks
Spontaneous post synaptic event frequency: excitatory currents1
 No change
 Whole-cell patch clamp
 6 weeks
Self grooming: perseveration1
 No change
 Grooming behavior assessments
 6 weeks
 Not Reported: Circadian sleep/wake cycle, Communications, Immune response, Learning & memory, Maternal behavior, Physiological parameters, Seizure

M_CUL3_5_CKO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Brain size1
Decreased
Description: Homozygous mutants show decrease in brain size.
Exp Paradigm: NA
 Gross necroscopy
 P6
Size/growth1
Decreased
Description: Homozygous mutants show decrease in body weight.
Exp Paradigm: NA
 Body weight measurement
 P6
Mortality/lethality1
Increased
Description: Homozygous mutants died within 1 week after birth.
Exp Paradigm: NA
 General observations
 P7
Size/growth1
 No change
 Body weight measurement
 5 weeks
 Not Reported: Circadian sleep/wake cycle, Communications, Emotion, Immune response, Learning & memory, Maternal behavior, Molecular profile, Motor phenotype, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior

M_CUL3_6_CKO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Synaptic transmission: excitatory1
Decreased
Description: Mutants show decrease in nmdar-epsc in pfc pyramidal neurons.
Exp Paradigm: NA
 Whole-cell patch clamp
 6 weeks
Social approach1
Decreased
Description: Mutants show decrease in time spent investigating a social stimulus over a non-social stimulus.
Exp Paradigm: NA
 Three-chamber social approach test
 6 weeks
Social memory1
Decreased
Description: Mutants show decrease in time spent investigating a novel social stimulus over a familiar social stimulus.
Exp Paradigm: NA
 Three-chamber social approach test
 6 weeks
Targeted expression1
Decreased
Description: Most of the cre virus-infected pfc pyramidal neurons in mutants lost the expression of cul3.
Exp Paradigm: Prefrontal cortex
 Immunostaining
 6 weeks
Protein expression level evidence1
Abnormal
Description: Pfc-specific deletion of cul3 generated 72 upregulated and 93 downregulated proteins in the pfc with differentially expressed proteins involved in the acetylcholine receptor pathway, extracellular matrix disassembly, neural nucleus development, oligodendrocyte differentiation and myelination.
Exp Paradigm: NA
 Liquid chromatography-mass spectrometry (lc-ms)
 6 weeks
Targeted expression1
Decreased
Description: Mutants show decrease in cul3 protein levels in pfc lysates.
Exp Paradigm: Prefrontal cortex
 Western blot
 6 weeks
Anxiety1
 No change
 Open field test
 6 weeks
General locomotor activity: ambulatory activity1
 No change
 Open field test
 6 weeks
Motor coordination and balance1
 No change
 Accelerating rotarod test
 6 weeks
Motor learning1
 No change
 Accelerating rotarod test
 6 weeks
Epsp-spike relationship1
 No change
 Whole-cell patch clamp
 6 weeks
Membrane potential1
 No change
 Whole-cell patch clamp
 6 weeks
Presynaptic function: paired-pulse facilitation1
 No change
 Whole-cell patch clamp
 6 weeks
Spontaneous post synaptic event frequency: excitatory currents1
 No change
 Whole-cell patch clamp
 6 weeks
Self grooming: perseveration1
 No change
 Grooming behavior assessments
 6 weeks
Sensorimotor gating1
 No change
 Prepulse inhibition
 6 weeks
Startle response: acoustic stimulus1
 No change
 Acoustic startle reflex test
 6 weeks
 Not Reported: Circadian sleep/wake cycle, Communications, Developmental profile, Immune response, Learning & memory, Maternal behavior, Neuroanatomy / ultrastructure / cytoarchitecture, Physiological parameters, Seizure

M_CUL3_7_CKO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Neuronal activation1
Decreased
Description: Mutants show decrease in excitability of d1 positive striatonigral medium spiny neurons.
Exp Paradigm: NA
 Whole-cell patch clamp
 6 weeks
Action potential property: firing rate1
Decreased
Description: Mutants show a large decrease in action potential frequency in putative d1 + msns which required high depolarizing currents for firing ap. mutants show a small decrease in action potential frequency in putative d2 + msns, which required low depolarizing currents for firing ap.
Exp Paradigm: NA
 Whole-cell patch clamp
 6 weeks
Self grooming: perseveration1
Increased
Description: Mutants show increase in time spent self-grooming.
Exp Paradigm: NA
 Grooming behavior assessments
 6 weeks
Targeted expression1
Decreased
Description: Mutants show decrease in cul3 protein levels in striatal lysates.
Exp Paradigm: Striatum
 Western blot
 6 weeks
Protein expression level evidence1
Abnormal
Description: Striatum-specific deletion of cul3 produced 37 upregulated and 11 downregulated proteins in the striatum with differentially expressed proteins enriched in processes like negative regulation of cell differentiation and regulation of proteolysis.
Exp Paradigm: NA
 Liquid chromatography-mass spectrometry (lc-ms)
 6 weeks
Targeted expression1
Decreased
Description: Mutants show decrease in expression of cul3 in cre virus-infected striatal medium spiny neurons.
Exp Paradigm: NA
 Immunostaining
 6 weeks
Anxiety1
 No change
 Open field test
 6 weeks
General locomotor activity: ambulatory activity1
 No change
 Open field test
 6 weeks
Motor coordination and balance1
 No change
 Accelerating rotarod test
 6 weeks
Motor learning1
 No change
 Accelerating rotarod test
 6 weeks
Miniature post synaptic current amplitude: excitatory1
 No change
 Whole-cell patch clamp
 6 weeks
Miniature post synaptic current amplitude: inhibitory1
 No change
 Whole-cell patch clamp
 6 weeks
Miniature post synaptic current frequency: inhibitory1
 No change
 Whole-cell patch clamp
 6 weeks
Presynaptic function: paired-pulse facilitation1
 No change
 Whole-cell patch clamp
 6 weeks
Spontaneous post synaptic event amplitude: inhibitory currents1
 No change
 Whole-cell patch clamp
 6 weeks
Sensorimotor gating1
 No change
 Prepulse inhibition
 6 weeks
Startle response: acoustic stimulus1
 No change
 Acoustic startle reflex test
 6 weeks
Social approach1
 No change
 Three-chamber social approach test
 6 weeks
 Not Reported: Circadian sleep/wake cycle, Communications, Developmental profile, Immune response, Learning & memory, Maternal behavior, Neuroanatomy / ultrastructure / cytoarchitecture, Physiological parameters, Seizure

M_CUL3_10_CKO_HT

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Dendritic architecture: spine density1
Increased
Description: Mutants show increase in the numbers of spines on apical and basal dendrites of ca1 neurons in the young.
Exp Paradigm: NA
 Golgi-cox staining
 P14
Epsp-spike relationship1
Increased
Description: Mutants show increase in frequency of action potentials in response to injected currents in hippocampal pyramidal neurons, indicating increased excitability.
Exp Paradigm: NA
 Whole-cell current clamp
 P60
Miniature post synaptic current frequency: inhibitory1
Increased
Description: Mutants show increase in mipsc frequency in ca1 neurons in hippocampal slices.
Exp Paradigm: NA
 Whole-cell current clamp
 P60
Miniature post synaptic current frequency: excitatory1
Increased
Description: Mutants show increase in frequency of mepscs in ca1 neurons in hippocampal slices.
Exp Paradigm: NA
 Whole-cell current clamp
 P60
Social memory1
Decreased
Description: Mutants spent less time with unfamiliar than familiar social targets.
Exp Paradigm: NA
 Three-chamber social approach test
 P60-p80
Social approach1
Decreased
Description: Mutants show no difference in time spent between social targets and inanimate objects.
Exp Paradigm: NA
 Three-chamber social approach test
 P60-p80
Anxiety1
Increased
Description: Mutants spent less time in the center of the open field.
Exp Paradigm: NA
 Open field test
 P60-p80
Anxiety1
Increased
Description: Mutants show fewer entries, less total time they spent in open arms but no change in time spent in closed arms.
Exp Paradigm: NA
 Elevated plus maze test
 P60-p80
Targeted expression1
Decreased
Description: Mutants show decrease in cul3 protein levels in cortical lysates.
Exp Paradigm: NA
 Western blot
 P14
Mortality/lethality1
 No change
 Kaplan-meier survival curve
 P0-p40
General locomotor activity: ambulatory activity1
 No change
 Open field test
 P60-p80
Brain size1
 No change
 Measurement of tissue weight
 P14
Cortical thickness1
 No change
 Histology
 P14
Dendritic architecture: dendritic length1
 No change
 Golgi-cox staining
 P14
Dendritic architecture: dendritic tree complexity1
 No change
 Golgi-cox staining
 P14
Hippocampal morphology1
 No change
 Histology
 P14
Morphology and size of the corpus callosum1
 No change
 Histology
 P14
Neocortex morphology1
 No change
 Histology
 P14
Membrane potential1
 No change
 Whole-cell current clamp
 P60
Miniature post synaptic current amplitude: excitatory1
 No change
 Whole-cell current clamp
 P60
Miniature post synaptic current amplitude: inhibitory1
 No change
 Whole-cell current clamp
 P60
 Not Reported: Circadian sleep/wake cycle, Communications, Immune response, Learning & memory, Maternal behavior, Physiological parameters, Repetitive behavior, Seizure, Sensory

M_CUL3_11_CKO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Hippocampal morphology1
Abnormal
Description: Mutants show deformed hippocampus.
Exp Paradigm: NA
 Histology
 P14
Cortical thickness1
Decreased
Description: Mutants show decreased cortical thickness.
Exp Paradigm: NA
 Histology
 P14
Neocortex morphology1
Abnormal
Description: Mutants show abnormal cortical structure.
Exp Paradigm: NA
 Histology
 P14
Brain size1
Decreased
Description: Mutants show decreased brain size.
Exp Paradigm: NA
 Measurement of tissue weight
 P14
Morphology and size of the corpus callosum1
Decreased
Description: Mutants show agenesis of the corpus callosum.
Exp Paradigm: NA
 Histology
 P14
Mortality/lethality1
Increased
Description: Mutants die before p21.
Exp Paradigm: NA
 Kaplan-meier survival curve
 P0-p21
Targeted expression1
Decreased
Description: Mutants show decrease in cul3 protein levels in cortical lysates.
Exp Paradigm: NA
 Western blot
 P14
 Not Reported: Circadian sleep/wake cycle, Communications, Emotion, Immune response, Learning & memory, Maternal behavior, Motor phenotype, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior

M_CUL3_8_CKO_HT

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Dendritic architecture: spine density1
Increased
Description: Mutants show increase in the numbers of spines on apical but not basal dendrites of ca1 neurons in adult and increase in spine numbers on apical and basal dendrites of ca1 neurons in the young.
Exp Paradigm: NA
 Golgi-cox staining
 P60, p14-p17
Presynaptic function: paired-pulse facilitation1
Decreased
Description: Mutants show decrease in paired-pulse ratios indicating elevated mepsc frequency could be due to increased glutamate release probability.
Exp Paradigm: NA
 Whole-cell current clamp
 P60
Decay kinetics of miniature post synaptic currents1
Increased
Description: Mutants show faster decay of nmdar currents in the presence of mk-801.
Exp Paradigm: NA
 Whole-cell current clamp
 P60
Miniature post synaptic current frequency: inhibitory1
Increased
Description: Mutants show increase in mipsc frequency in ca1 neurons in adult but not young hippocampal slices.
Exp Paradigm: NA
 Whole-cell current clamp
 P60, p15
Action potential property: firing rate1
Increased
Description: Mutants show increased rate of successful responses and synaptic efficacy to minimal stimulation.
Exp Paradigm: NA
 Whole-cell current clamp
 P60
Miniature post synaptic current frequency: excitatory1
Increased
Description: Mutants show increase in frequency of mepscs in ca1 neurons resulting in increased e-i ratios in adult and young hippocampal slices.
Exp Paradigm: NA
 Whole-cell current clamp
 P60, p15
Epsp-spike relationship1
Increased
Description: Mutants show increase in frequency of action potentials in response to injected currents in hippocampal pyramidal neurons, indicating increased excitability, in adult and young slices.
Exp Paradigm: NA
 Whole-cell current clamp
 P60, p15
Social memory1
Decreased
Description: Mutants spent less time with unfamiliar than familiar social targets.
Exp Paradigm: NA
 Three-chamber social approach test
 P60-p80
Social approach1
Decreased
Description: Mutants show no difference in time spent between social targets and inanimate objects.
Exp Paradigm: NA
 Three-chamber social approach test
 P60-p80
Anxiety1
Increased
Description: Mutants spent less time in the center of the open field.
Exp Paradigm: NA
 Open field test
 P60-p80
Anxiety1
Increased
Description: Mutants show fewer entries into open arms less total time they spent in open arms but no change in time spent in closed arms.
Exp Paradigm: NA
 Elevated plus maze test
 P60-p80
Targeted expression1
Decreased
Description: Mutants show decrease in cul3 protein levels in a gene dosage dependent manner.
Exp Paradigm: NA
 Western blot
 P14
Protein expression level evidence1
Decreased
Description: Mutants show decreased protein levels of bckdk.
Exp Paradigm: NA
 Western blot
 P60
Regulation of translation1
Abnormal
Description: Mutants show increased protein levels of eif4g1 but not eif4ge or eif4a1, indicating abnormal cap-dependent translation initiation and synaptic protein synthesis.
Exp Paradigm: NA
 Western blot
 P60
Protein expression level evidence1
Abnormal
Description: Mutants show 355 differentially expressed proteins implicating neuronal excitability, snare complex disassembly, synaptic vesicle localization, synaptic vesicle cycle, and presynaptic assembly including snap-a, snap-b, nsf, ap-3 complex subunit mu-2, caps1, rabphilin-3a, eif4g1, nlgn1, and pten.
Exp Paradigm: NA
 Tandem mass tagging (tmt)
 P60
Protein ubiquitination1
Decreased
Description: Mutants show decreased levels of ubiquitinated eif4g1 in the cortex.
Exp Paradigm: Eif4g1
 Western blot
 P14
Protein binding1
Increased
Description: Mutants show increased coprecipitation of endogenous eif4e and eif4g1 in the hippocampus.
Exp Paradigm: Eif4e, eif4g1
 Western blot
 P14
Protein expression level evidence1
Increased
Description: Mutants show increased protein levels of pten, shank1, vglut1, a/b-snap, nsf, and vamp1.
Exp Paradigm: NA
 Western blot
 P60
Mortality/lethality1
 No change
 Kaplan-meier survival curve
 P0-p40
Size/growth1
 No change
 Body weight measurement
 P14
Spatial working memory1
 No change
 Y-maze test
 P60-p80
General locomotor activity: ambulatory activity1
 No change
 Open field test
 P60-p80
Motor coordination and balance1
 No change
 Accelerating rotarod test
 P60-p80
Motor learning1
 No change
 Accelerating rotarod test
 P60-p80
Brain size1
 No change
 Measurement of tissue weight
 P14
Cortical lamination1
 No change
 Histology
 P14
Cortical thickness1
 No change
 Histology
 P14
Dendritic architecture: dendritic length1
 No change
 Golgi-cox staining
 P60
Dendritic architecture: dendritic tree complexity1
 No change
 Golgi-cox staining
 P60
Hippocampal morphology1
 No change
 Histology
 P14
Morphology and size of the corpus callosum1
 No change
 Histology
 P14
Neuronal number1
 No change
 Immunohistochemistry
 P60
Post-synaptic density size: inhibitory synapses1
 No change
 Immunohistochemistry
 P14-17
Size of cerebral ventricles1
 No change
 Histology
 P14
Membrane potential1
 No change
 Whole-cell current clamp
 P60, p15
Miniature post synaptic current amplitude: excitatory1
 No change
 Whole-cell current clamp
 P60, p15
Miniature post synaptic current amplitude: inhibitory1
 No change
 Whole-cell current clamp
 P60, p15
Reproductive function1
 No change
 Kaplan-meier survival curve
 P0-p40
Self grooming: perseveration1
 No change
 Grooming behavior assessments
 P60-p80
Stereotypy1
 No change
 Y-maze test
 P60-p80
Olfaction1
 No change
 Buried food test
 P60-p80
 Not Reported: Circadian sleep/wake cycle, Communications, Immune response, Maternal behavior, Physiological parameters, Seizure

M_CUL3_9_CKO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Hippocampal morphology1
Abnormal
Description: Mutants show deformed hippocampus.
Exp Paradigm: NA
 Histology
 P14
Cortical thickness1
Decreased
Description: Mutants show decreased cortical thickness.
Exp Paradigm: NA
 Histology
 P14
Size of cerebral ventricles1
Increased
Description: Mutants show enlarged ventricles.
Exp Paradigm: NA
 Histology
 P14
Cortical lamination1
Abnormal
Description: Mutants show disrupted cortical layers.
Exp Paradigm: NA
 Histology
 P14
Morphology and size of the corpus callosum1
Decreased
Description: Mutants show agenesis of the corpus callosum.
Exp Paradigm: NA
 Histology
 P14
Brain size1
Decreased
Description: Mutants show decreased brain size.
Exp Paradigm: NA
 Measurement of tissue weight
 P14
Size/growth1
Decreased
Description: Mutants show decreased body weight.
Exp Paradigm: NA
 Body weight measurement
 P14
Mortality/lethality1
Increased
Description: Mutants die between p10 and p17.
Exp Paradigm: NA
 Kaplan-meier survival curve
 P0-p20
Targeted expression1
Decreased
Description: Mutants show decrease in cul3 protein levels in a gene dosage dependent manner.
Exp Paradigm: NA
 Western blot
 P14
Regulation of translation1
Abnormal
Description: Mutants show increased protein levels of eif4g1 but not eif4ge or eif4a1, indicating abnormal cap-dependent translation initiation and synaptic protein synthesis.
Exp Paradigm: NA
 Western blot
 P14
Protein expression level evidence1
Abnormal
Description: Mutants show 1,466 differentially expressed proteins implicating neuronal excitability, snare complex disassembly, synaptic vesicle localization, synaptic vesicle cycle, and presynaptic assembly including snap-a, snap-b, nsf, ap-3 complex subunit mu-2, caps1, rabphilin-3a, eif4g1, nlgn1, and pten.
Exp Paradigm: NA
 Tandem mass tagging (tmt)
 P14
 Not Reported: Circadian sleep/wake cycle, Communications, Emotion, Immune response, Learning & memory, Maternal behavior, Motor phenotype, Neurophysiology, Physiological parameters, Repetitive behavior, Seizure, Sensory, Social behavior

M_CUL3_12_KO_HT

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Motor coordination and balance1
Decreased
Description: Delayed performance in cliff aversion tests, suggesting defects in with motor control and vestibular difficulties
 Cliff avoidance test
 P0-21
Hyperactivity1
Increased
Description: Increased distance and speed of travel
 Open field test
 Adult
General locomotor activity: Ambulatory activity1
Increased
Description: Increased total distance travelled
 Open field test
 Adult
Righting response1
Decreased
Description: Delayed performance in surface righting suggesting defects in with motor control and vestibular difficulties
 Developmental milestone measurements
 P0-21
General locomotor activity1
Increased
Description: Increased total speed
 Open field test
 Adult
Cortical thickness1
Decreased
Description: Decreased cortical thickness
 Magnetic resonance imaging (MRI)
 8-10 weeks, P7
Morphology of the insular cortex1
Decreased
Description: Decreased volume of insular cortex; greater in female than male
 Magnetic resonance imaging (MRI)
 8-10 weeks, P7
Dendritic architecture: dendritic tree complexity1
Decreased
Description: Decreased number of neurites
 Immunohistochemistry
 E17.5
Neuronal number1
Decreased
Description: Reduction in neun- and brn2-positive neuron number
 Immunohistochemistry
 8-10 weeks
Cerebellar morphology1
Decreased
Description: Decreased relative volume of the cerebellum
 Magnetic resonance imaging (MRI)
 8-10 weeks, P7
Morphology and size of the corpus callosum1
Decreased
Description: Decreased volume of corpus callosum
 Magnetic resonance imaging (MRI)
 8-10 weeks, P7
Dendritic architecture: dendritic length1
Decreased
Description: Decreased dendritic length
 Immunohistochemistry
 E17.5
Neuronal number1
Decreased
Description: Decreased tbr1 for post-mitotic neuronal cells in the developing cortex
 Cell counting
 E14
Brain size1
Decreased
Description: Brain volume abnormalities in multiple brain regions; males had greater number of brain regions altered than females
 Magnetic resonance imaging (MRI)
 8-10 weeks, P7
Hypothalamic morphology1
Increased
Description: Increased volume of hypothalamus
 Magnetic resonance imaging (MRI)
 P7
Cortical thickness1
Decreased
Description: Decreased cortical thickness
 Immunohistochemistry
 E14
Neocortex morphology: size1
Decreased
Description: Decreased relative volume of the somatosensory cortex, primary visual cortex, entorhinal cortex
 Magnetic resonance imaging (MRI)
 8-10 weeks, P7
Hippocampal morphology1
Decreased
Description: Decreased relative volume of the dentate gyrus
 Magnetic resonance imaging (MRI)
 8-10 weeks, P7
Olfactory bulb morphology1
Decreased
Description: Decreased volume of olfactory bulb region
 Magnetic resonance imaging (MRI)
 8-10 weeks, P7
Neuronal apoptosis1
Increased
Description: Increased apoptosis in the primary cortical neurons at div14
 Immunohistochemistry
 8-10 weeks
Network excitability1
Decreased
Description: Decreased weighted mean firing rate
 Multielectrode array recording
 E17.5
Intrinsic bursting events or spikes1
Decreased
Description: Decreased bursting activity
 Multielectrode array recording
 E17.5
Social memory1
Decreased
Description: Decrease in time spent with novel mouse over familiar mouse
 Three-chamber social approach test
 Adult
Size/growth1
Decreased
Description: Smaller in size
 Body weight measurement
 E15.5, E17.5, Adult
Object recognition memory1
Decreased
Description: Shorter time spent exploring novel object
 Novel object recognition test
 Adult
Protein expression level evidence1
Increased
Description: Upregulation of rhoa gtpase
 Tandem mass tagging (TMT)
 E17.5, P7, 4-6 weeks
Cytoskeletal organization1
Decreased
Description: Pls3 expression upregulated
 Western blot
 Adult
Targeted expression1
Decreased
Description: Reduced levels of cul3 transcripts
 Quantitative PCR (qRT-PCR)
 Adult
Protein expression level evidence1
Increased
Description: Upregulation of rhoa gtpase
 Western blot
 E17.5, Adult
Cytoskeletal organization1
Decreased
Description: Misregulation of cytoskeletal proteins involved in actin polymerization
 RNA sequencing
 E17.5, P7, 4-6 weeks
Targeted expression1
Decreased
Description: Reduced cul3 protein levels
 Western blot
 Adult
Differential gene expression1
Abnormal
Description: 727, 1641, and 1032 unique degs in cx, cbl, and hip respectively , gse144046, some degs are sex-specific, dysregulation of asd genes in the cortex during embryonic and early postnatal periods
 RNA sequencing
 E17.5, P7, 4-6 weeks
Cytoskeletal organization1
Decreased
Description: Intermediate filament proteins upregulated across multiple dep datasets; downregulation of proteins involved in actin cytoskeleton-related processes (actin filament binding, actin cytoskeleton organization, regulation of actin cytoskeleton polymerization, regulation of actin filament length)
 Tandem mass tagging (TMT)
 E17.5, P7, 4-6 weeks
Proteomic profile diversity1
Abnormal
Description: Hundreds to thousands of differentially expressed proteins (deps), neuron cytoskeleton dysregulation, asd genes ctnnb1, dpysl2, nrxn1, stx1b, tbr1 were downregulated
 Tandem mass tagging (TMT)
 E17.5, P7, 4-6 weeks
Cytoskeletal organization1
Decreased
Description: Reduction of phalloidin intensity, decreased f-actin puncta per dendritic length
 Immunohistochemistry
 E17.5
Developmental trajectory1
 No change
 Developmental milestone measurements
 P0-21
Mortality/lethality1
 No change
 General observations
 Adult
Anxiety1
 No change
 Open field test
 Adult
Cell proliferation: neural precursors1
 No change
 Immunohistochemistry
 
Neuronal morphology1
 No change
 Immunohistochemistry
 E17.5
Reproductive function1
 No change
 General observations
 Adult
Self grooming1
 No change
 Grooming behavior assessments
 Adult
Social approach1
 No change
 Three-chamber social approach test
 Adult
 Not Reported:


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
10-Sep septin 10 151011 Q9P0V9 IP; MS; COMPASS
Bennett EJ , et al. 2010
15-Sep selenophosphate synthetase 1 22929 B4DWK0 IP; MS; COMPASS
Bennett EJ , et al. 2010
AAR2 AAR2 splicing factor homolog (S. cerevisiae) 25980 Q9Y312 IP; MS; COMPASS
Bennett EJ , et al. 2010
ABCA13 ATP-binding cassette, sub-family A (ABC1), member 13 154664 Q86UQ4 IP; MS; COMPASS
Bennett EJ , et al. 2010
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 5825 P28288 IP; MS; COMPASS
Bennett EJ , et al. 2010
ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 6059 P61221 IP; MS; COMPASS
Bennett EJ , et al. 2010
ABTB1 ankyrin repeat and BTB (POZ) domain containing 1 80325 Q969K4 IP; MS; COMPASS
Bennett EJ , et al. 2010
ABTB1 ankyrin repeat and BTB (POZ) domain containing 1 80325 Q969K4 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 25841 Q8N961 GST; IP/WB; Y2H; in vitro ubiquitination assay
Maezawa S , et al. 2008
ACADM acyl-CoA dehydrogenase, C-4 to C-12 straight chain 34 P11310 IP; MS; COMPASS
Bennett EJ , et al. 2010
ACAT1 acetyl-CoA acetyltransferase 1 38 P24752 IP; MS; COMPASS
Bennett EJ , et al. 2010
ACBD3 acyl-CoA binding domain containing 3 64746 Q9H3P7 IP; MS; COMPASS
Bennett EJ , et al. 2010
ACIN1 apoptotic chromatin condensation inducer 1 22985 Q9UKV3 IP; MS; COMPASS
Bennett EJ , et al. 2010
ACLY ATP citrate lyase 47 P53396 IP; MS; COMPASS
Bennett EJ , et al. 2010
ACOT7 acyl-CoA thioesterase 7 11332 O00154 IP; LC-MS/MS; IP/WB
Li J , et al. 2016
ACTA2 actin, alpha 2, smooth muscle, aorta 59 D2JYH4 IP; MS; COMPASS
Bennett EJ , et al. 2010
ACTB actin, beta 60 P60709 IP; MS; COMPASS
Bennett EJ , et al. 2010
ACTBL2 actin, beta-like 2 345651 Q562R1 IP; MS; COMPASS
Bennett EJ , et al. 2010
ACTL6A actin-like 6A 86 O96019 IP; MS; COMPASS
Bennett EJ , et al. 2010
ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 10121 P61163 IP; MS; COMPASS
Bennett EJ , et al. 2010
ACTR1B ARP1 actin-related protein 1 homolog B, centractin beta (yeast) 10120 P42025 IP; MS; COMPASS
Bennett EJ , et al. 2010
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 10097 E9PF41 IP; MS; COMPASS
Bennett EJ , et al. 2010
ADAR adenosine deaminase, RNA-specific 103 P55265 IP; MS; COMPASS
Bennett EJ , et al. 2010
ADAR adenosine deaminase, RNA-specific 103 P55265 IP; LC-MS/MS
Li J , et al. 2016
ADD3 adducin 3 (gamma) 120 Q9UEY8 IP; LC-MS/MS
Li J , et al. 2016
ADSS adenylosuccinate synthase 159 P30520 IP; MS; COMPASS
Bennett EJ , et al. 2010
AGK acylglycerol kinase 55750 A4D1U5 IP; MS; COMPASS
Bennett EJ , et al. 2010
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase 178 P35573 IP; MS; COMPASS
Bennett EJ , et al. 2010
AGO1 argonaute RISC catalytic component 1 26523 Q9UL18 IP; MS; COMPASS
Bennett EJ , et al. 2010
AGO2 argonaute RISC catalytic component 2 27161 A4FVC0 IP; MS; COMPASS
Bennett EJ , et al. 2010
AGO3 argonaute RISC catalytic component 3 192669 B4E1P5 IP; MS; COMPASS
Bennett EJ , et al. 2010
AHCY adenosylhomocysteinase 191 P23526 IP; MS; COMPASS
Bennett EJ , et al. 2010
AHSA1 AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast) 10598 O95433 IP; MS; COMPASS
Bennett EJ , et al. 2010
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1 9131 O95831 IP; MS; COMPASS
Bennett EJ , et al. 2010
AIM1 absent in melanoma 1 202 B3KPT0 IP; MS; COMPASS
Bennett EJ , et al. 2010
AK2 adenylate kinase 2 204 P54819 IP; MS; COMPASS
Bennett EJ , et al. 2010
AKAP11 A kinase (PRKA) anchor protein 11 11215 Q9UKA4 IP; MS; COMPASS
Bennett EJ , et al. 2010
AKAP8 A kinase (PRKA) anchor protein 8 10270 O43823 IP; MS; COMPASS
Bennett EJ , et al. 2010
AKAP8L A kinase (PRKA) anchor protein 8-like 26993 Q9ULX6 IP; MS; COMPASS
Bennett EJ , et al. 2010
AKAP8L A kinase (PRKA) anchor protein 8-like 26993 Q9ULX6 IP; LC-MS/MS
Li J , et al. 2016
ALDH18A1 aldehyde dehydrogenase 18 family, member A1 5832 P54886 IP; MS; COMPASS
Bennett EJ , et al. 2010
ALDH1B1 aldehyde dehydrogenase 1 family, member B1 219 P30837 IP; MS; COMPASS
Bennett EJ , et al. 2010
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) 217 P05091 IP; MS; COMPASS
Bennett EJ , et al. 2010
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 224 P51648 IP; MS; COMPASS
Bennett EJ , et al. 2010
ALDOA aldolase A, fructose-bisphosphate 226 P04075 IP; MS; COMPASS
Bennett EJ , et al. 2010
ALYREF Aly/REF export factor 10189 E9PB61 IP; MS; COMPASS
Bennett EJ , et al. 2010
AMOT angiomotin 154796 Q4VCS5 IP; MS; COMPASS
Bennett EJ , et al. 2010
AMPD1 adenosine monophosphate deaminase 1 270 P23109 IP; MS; COMPASS
Bennett EJ , et al. 2010
ANKFY1 ankyrin repeat and FYVE domain containing 1 51479 Q9P2R3 IP; MS; COMPASS
Bennett EJ , et al. 2010
ANKRD26 ankyrin repeat domain 26 22852 Q9UPS8 ChIP
Mathew R , et al. 2012
ANKRD39 ankyrin repeat domain 39 51239 Q53RE8 IP; MS; COMPASS
Bennett EJ , et al. 2010
ANKRD39 ankyrin repeat domain 39 51239 Q53RE8 IP; LC-MS/MS
Huttlin EL , et al. 2015
AP1B1 adaptor-related protein complex 1, beta 1 subunit 162 Q10567 IP; MS; COMPASS
Bennett EJ , et al. 2010
AP2B1 adaptor-related protein complex 2, beta 1 subunit 163 P63010 IP; MS; COMPASS
Bennett EJ , et al. 2010
AP2M1 adaptor-related protein complex 2, mu 1 subunit 1173 Q96CW1 IP; MS; COMPASS
Bennett EJ , et al. 2010
APP amyloid beta (A4) precursor protein 351 P05067 Protein microarray
Olh J , et al. 2011
ARF4 ADP-ribosylation factor 4 378 P18085 IP; MS; COMPASS
Bennett EJ , et al. 2010
ARHGDIA Rho GDP dissociation inhibitor (GDI) alpha 396 P52565 IP; MS; COMPASS
Bennett EJ , et al. 2010
ARID1A AT rich interactive domain 1A (SWI-like) 8289 O14497 IP; MS; COMPASS
Bennett EJ , et al. 2010
ARL1 ADP-ribosylation factor-like 1 400 P40616 IP; MS; COMPASS
Bennett EJ , et al. 2010
ARMC5 armadillo repeat containing 5 79798 Q96C12 IP; MS; COMPASS
Bennett EJ , et al. 2010
ARMC5 armadillo repeat containing 5 79798 Q96C12 IP; LC-MS/MS
Huttlin EL , et al. 2015
ARMC8 armadillo repeat containing 8 25852 B7Z637 IP; MS; COMPASS
Bennett EJ , et al. 2010
ASPH aspartate beta-hydroxylase 444 B4E2K4 IP; MS; COMPASS
Bennett EJ , et al. 2010
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 259266 B3KWI2 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATAD3A ATPase family, AAA domain containing 3A 55210 Q9NVI7 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATAD3B ATPase family, AAA domain containing 3B 83858 Q5T9A4 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATF2 activating transcription factor 2 1386 P15336 IP/WB
Bhoumik A , et al. 2008
ATP1A1 ATPase, Na+/K+ transporting, alpha 1 polypeptide 476 P05023 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATP1A2 ATPase, Na+/K+ transporting, alpha 2 polypeptide 477 P50993 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 480 Q13733 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATP2A1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 487 O14983 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 488 P16615 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 498 P25705 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATP5B ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 506 P06576 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 509 P36542 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATP6V1A ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 523 P38606 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATXN10 ataxin 10 25814 Q9UBB4 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATXN2 ataxin 2 6311 Q99700 IP; MS; COMPASS
Bennett EJ , et al. 2010
ATXN2L ataxin 2-like 11273 Q8WWM7 IP; MS; COMPASS
Bennett EJ , et al. 2010
AURKA aurora kinase A 6790 O14965 IP/WB; in vitro ubiquitination assay
Moghe S , et al. 2012
AURKAIP1 aurora kinase A interacting protein 1 54998 Q9NWT8 IP; MS; COMPASS
Bennett EJ , et al. 2010
AURKB aurora kinase B 9212 Q96GD4 IP/WB; in vitro ubiquitination assay
Sumara I , et al. 2007
BAG2 BCL2-associated athanogene 2 9532 O95816 IP; MS; COMPASS
Bennett EJ , et al. 2010
BAG4 BCL2-associated athanogene 4 9530 O95429 IP; MS; COMPASS
Bennett EJ , et al. 2010
BAG5 BCL2-associated athanogene 5 9529 Q9UL15 IP; MS; COMPASS
Bennett EJ , et al. 2010
BBS4 Bardet-Biedl syndrome 4 585 Q96RK4 IP; MS; COMPASS
Bennett EJ , et al. 2010
BCDIN3D BCDIN3 domain containing 144233 Q7Z5W3 IP; MS; COMPASS
Bennett EJ , et al. 2010
BCKDHA branched chain keto acid dehydrogenase E1, alpha polypeptide 593 B4DP47 IP; MS; COMPASS
Bennett EJ , et al. 2010
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 594 P21953 IP; MS; COMPASS
Bennett EJ , et al. 2010
BCL6 B-cell CLL/lymphoma 6 604 P41182 IP/WB
Mathew R , et al. 2012
BCL7A B-cell CLL/lymphoma 7A 605 Q4VC05 IP; MS; COMPASS
Bennett EJ , et al. 2010
BCLAF1 BCL2-associated transcription factor 1 9774 Q9NYF8 IP; MS; COMPASS
Bennett EJ , et al. 2010
BMI1 BMI1 polycomb ring finger oncogene 648 P35226 IP/WB
Hernndez-Muoz I , et al. 2005
BOLA2 bolA homolog 2 (E. coli) 552900 Q9H3K6 IP; MS; COMPASS
Bennett EJ , et al. 2010
BOLA2B bolA homolog 2B (E. coli) 654483 Q9H3K6 IP; MS; COMPASS
Bennett EJ , et al. 2010
BOP1 block of proliferation 1 23246 Q14137 IP; MS; COMPASS
Bennett EJ , et al. 2010
BPLF1 Deneddylase 3783726 P03186 IP/WB
Gastaldello S , et al. 2012
BRIX1 BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) 55299 Q8TDN6 IP; MS; COMPASS
Bennett EJ , et al. 2010
BRMS1 breast cancer metastasis suppressor 1 25855 G5E9I4 IP/WB; in vitro ubiquitination assay
Kim B , et al. 2011
BSG basigin (Ok blood group) 682 P35613 IP; MS; COMPASS
Bennett EJ , et al. 2010
BTBD1 BTB (POZ) domain containing 1 53339 Q9H0C5 IP; MS; COMPASS
Bennett EJ , et al. 2010
BTBD1 BTB (POZ) domain containing 1 53339 Q9H0C5 IP; LC-MS/MS
Huttlin EL , et al. 2015
BTBD10 BTB (POZ) domain containing 10 84280 D3DQW7 IP; MS; COMPASS
Bennett EJ , et al. 2010
BTBD10 BTB (POZ) domain containing 10 84280 D3DQW7 IP; LC-MS/MS
Huttlin EL , et al. 2015
BTBD2 BTB (POZ) domain containing 2 55643 Q9BX70 IP; MS; COMPASS
Bennett EJ , et al. 2010
BTBD7 BTB (POZ) domain containing 7 55727 Q9P203 IP; MS; COMPASS
Bennett EJ , et al. 2010
BTBD8 BTB (POZ) domain containing 8 284697 Q5XKL5 IP; MS; COMPASS
Bennett EJ , et al. 2010
BTBD9 BTB (POZ) domain containing 9 114781 Q96Q07 IP; MS; COMPASS
Bennett EJ , et al. 2010
BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) 9184 O43684 IP; MS; COMPASS
Bennett EJ , et al. 2010
C11orf57 chromosome 11 open reading frame 57 55216 Q6ZUT1 IP; MS; COMPASS
Bennett EJ , et al. 2010
C11orf70 chromosome 11 open reading frame 70 85016 E9PJU1 IP; MS; COMPASS
Bennett EJ , et al. 2010
C14orf166 chromosome 14 open reading frame 166 51637 Q9Y224 IP; MS; COMPASS
Bennett EJ , et al. 2010
C17orf85 chromosome 17 open reading frame 85 55421 Q53F19 IP; MS; COMPASS
Bennett EJ , et al. 2010
C1orf35 chromosome 1 open reading frame 35 79169 Q9BU76 IP; MS; COMPASS
Bennett EJ , et al. 2010
C1QBP complement component 1, q subcomponent binding protein 708 Q07021 IP; MS; COMPASS
Bennett EJ , et al. 2010
C20orf196 chromosome 20 open reading frame 196 149840 Q8IYI0 IP; MS; COMPASS
Bennett EJ , et al. 2010
C22orf28 chromosome 22 open reading frame 28 51493 Q9Y3I0 IP; MS; COMPASS
Bennett EJ , et al. 2010
C8orf33 chromosome 8 open reading frame 33 65265 Q9H7E9 IP; MS; COMPASS
Bennett EJ , et al. 2010
CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 790 P27708 IP; MS; COMPASS
Bennett EJ , et al. 2010
CALM1 calmodulin 1 (phosphorylase kinase, delta) 801 P62158 IP; MS; COMPASS
Bennett EJ , et al. 2010
CALM2 calmodulin 2 (phosphorylase kinase, delta) 805 P62158 IP; MS; COMPASS
Bennett EJ , et al. 2010
CALM3 calmodulin 3 (phosphorylase kinase, delta) 808 B4DJ51 IP; MS; COMPASS
Bennett EJ , et al. 2010
CAMK1D calcium/calmodulin-dependent protein kinase ID 57118 Q5SQQ7 Y2H
Wang J , et al. 2011
CAMK2G calcium/calmodulin-dependent protein kinase II gamma 818 Q13555 IP; MS; COMPASS
Bennett EJ , et al. 2010
CAND1 cullin-associated and neddylation-dissociated 1 55832 Q86VP6 IP; MS; COMPASS
Bennett EJ , et al. 2010
CANX calnexin 821 P27824 IP; MS; COMPASS
Bennett EJ , et al. 2010
CAPRIN1 cell cycle associated protein 1 4076 Q14444 IP; MS; COMPASS
Bennett EJ , et al. 2010
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 829 P52907 IP; MS; COMPASS
Bennett EJ , et al. 2010
CARM1 coactivator-associated arginine methyltransferase 1 10498 Q86X55 IP; MS; COMPASS
Bennett EJ , et al. 2010
CASP8 caspase 8, apoptosis-related cysteine peptidase 841 Q14790 IP/WB
Gonzalvez F , et al. 2012
CBWD2 COBW domain containing 2 150472 Q8IUF1 IP; MS; COMPASS
Bennett EJ , et al. 2010
CCDC110 coiled-coil domain containing 110 256309 Q8TBZ0 IP; MS; COMPASS
Bennett EJ , et al. 2010
CCDC22 coiled-coil domain containing 22 28952 O60826 IP/WB
Starokadomskyy P , et al. 2013
CCDC39 coiled-coil domain containing 39 339829 Q9UFE4 IP; MS; COMPASS
Bennett EJ , et al. 2010
CCDC47 coiled-coil domain containing 47 57003 Q96A33 IP; MS; COMPASS
Bennett EJ , et al. 2010
CCND1 cyclin D1 595 P24385 IP/WB
Singer JD , et al. 1999
CCNE1 cyclin E1 898 P24864 Y2H; IP/WB; in vitro ubiquitination assay
Singer JD , et al. 1999
CCT2 chaperonin containing TCP1, subunit 2 (beta) 10576 P78371 IP; MS; COMPASS
Bennett EJ , et al. 2010
CCT2 chaperonin containing TCP1, subunit 2 (beta) 10576 P78371 IP; LC-MS/MS
Li J , et al. 2016
CCT3 chaperonin containing TCP1, subunit 3 (gamma) 7203 P49368 IP; MS; COMPASS
Bennett EJ , et al. 2010
CCT4 chaperonin containing TCP1, subunit 4 (delta) 10575 P50991 IP; MS; COMPASS
Bennett EJ , et al. 2010
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 22948 P48643 IP; MS; COMPASS
Bennett EJ , et al. 2010
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 908 P40227 IP; MS; COMPASS
Bennett EJ , et al. 2010
CCT7 chaperonin containing TCP1, subunit 7 (eta) 10574 Q99832 IP; MS; COMPASS
Bennett EJ , et al. 2010
CCT8 chaperonin containing TCP1, subunit 8 (theta) 10694 P50990 IP; MS; COMPASS
Bennett EJ , et al. 2010
CD2BP2 CD2 (cytoplasmic tail) binding protein 2 10421 O95400 IP; MS; COMPASS
Bennett EJ , et al. 2010
CD84 CD84 molecule 8832 Q9UIB8 IP; MS; COMPASS
Bennett EJ , et al. 2010
CDC25A cell division cycle 25A 993 P30304 Y2H
Wang J , et al. 2011
CDC34 cell division cycle 34 997 P49427 GST
Plafker KS , et al. 2009
CDC45 cell division cycle 45 8318 O75419 IP; MS; COMPASS
Bennett EJ , et al. 2010
CDC5L CDC5 cell division cycle 5-like (S. pombe) 988 Q99459 IP; MS; COMPASS
Bennett EJ , et al. 2010
CDK4 cyclin-dependent kinase 4 1019 P11802 IP; MS; COMPASS
Bennett EJ , et al. 2010
CDKNeuro2aIP CDKN2A interacting protein 55602 Q9NXV6 IP; MS; COMPASS
Bennett EJ , et al. 2010
CIRBP cold inducible RNA binding protein 1153 Q14011 IP; MS; COMPASS
Bennett EJ , et al. 2010
CKAP4 cytoskeleton-associated protein 4 10970 Q07065 IP; MS; COMPASS
Bennett EJ , et al. 2010
CKB creatine kinase, brain 1152 P12277 IP; MS; COMPASS
Bennett EJ , et al. 2010
CKMT1A creatine kinase, mitochondrial 1A 548596 P12532 IP; MS; COMPASS
Bennett EJ , et al. 2010
CKMT1B creatine kinase, mitochondrial 1B 1159 P12532 IP; MS; COMPASS
Bennett EJ , et al. 2010
CLCC1 chloride channel CLIC-like 1 23155 Q96S66 IP; MS; COMPASS
Bennett EJ , et al. 2010
CLINT1 clathrin interactor 1 9685 Q14677 IP; MS; COMPASS
Bennett EJ , et al. 2010
CLPB ClpB caseinolytic peptidase B homolog (E. coli) 81570 Q9H078 IP; MS; COMPASS
Bennett EJ , et al. 2010
CLTA clathrin, light chain A 1211 P09496 IP; MS; COMPASS
Bennett EJ , et al. 2010
CLTC clathrin, heavy chain (Hc) 1213 Q00610 IP; MS; COMPASS
Bennett EJ , et al. 2010
CLTCL1 clathrin, heavy chain-like 1 8218 P53675 IP; MS; COMPASS
Bennett EJ , et al. 2010
CNNM4 cyclin M4 26504 Q6P4Q7 IP; MS; COMPASS
Bennett EJ , et al. 2010
COMMD1 copper metabolism (Murr1) domain containing 1 150684 Q8N668 IP/WB; GST
Mao X , et al. 2011
COMMD8 COMM domain containing 8 54951 Q9NX08 GST
Starokadomskyy P , et al. 2013
COPS2 COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) 9318 P61201 IP; MS; COMPASS
Bennett EJ , et al. 2010
COPS2 COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) 9318 P61201 IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS3 COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis) 8533 Q9UNS2 IP; MS; COMPASS
Bennett EJ , et al. 2010
COPS3 COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis) 8533 Q9UNS2 IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS4 COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) 51138 B3KST5 IP; MS; COMPASS
Bennett EJ , et al. 2010
COPS4 COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) 51138 B3KST5 IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS5 COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis) 10987 Q92905 IP; MS; COMPASS
Bennett EJ , et al. 2010
COPS5 COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis) 10987 Q92905 IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS6 COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis) 10980 Q7L5N1 IP; MS; COMPASS
Bennett EJ , et al. 2010
COPS6 COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis) 10980 Q7L5N1 IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS7A COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis) 50813 Q9UBW8 IP; MS; COMPASS
Bennett EJ , et al. 2010
COPS7A COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis) 50813 Q9UBW8 IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS7B COP9 signalosome subunit 7B 64708 Q9H9Q2 IP; MS; COMPASS
Bennett EJ , et al. 2010
COPS7B COP9 signalosome subunit 7B 64708 Q9H9Q2 IP; LC-MS/MS
Huttlin EL , et al. 2015
COPS8 COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) 10920 Q53QS9 IP; MS; COMPASS
Bennett EJ , et al. 2010
CPN2 carboxypeptidase N, polypeptide 2 1370 P22792 IP; MS; COMPASS
Bennett EJ , et al. 2010
CPNE7 copine VII 27132 Q9UBL6 IP; MS; COMPASS
Bennett EJ , et al. 2010
CPOX coproporphyrinogen oxidase 1371 P36551 IP; MS; COMPASS
Bennett EJ , et al. 2010
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa 29894 Q10570 IP; MS; COMPASS
Bennett EJ , et al. 2010
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa 53981 Q9P2I0 IP; MS; COMPASS
Bennett EJ , et al. 2010
CPSF6 cleavage and polyadenylation specific factor 6, 68kDa 11052 Q16630 IP; MS; COMPASS
Bennett EJ , et al. 2010
CSDE1 cold shock domain containing E1, RNA-binding 7812 O75534 IP; MS; COMPASS
Bennett EJ , et al. 2010
CSTB cystatin B (stefin B) 1476 P04080 IP; MS; COMPASS
Bennett EJ , et al. 2010
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 1479 Q12996 IP; MS; COMPASS
Bennett EJ , et al. 2010
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 1499 Q9WU82 IP; MS; COMPASS
Bennett EJ , et al. 2010
CTNND1 catenin (cadherin-associated protein), delta 1 1500 O60716 IP; MS; COMPASS
Bennett EJ , et al. 2010
CTPS1 CTP synthase 1 1503 P17812 IP; MS; COMPASS
Bennett EJ , et al. 2010
CTTN cortactin 2017 Q14247 IP; MS; COMPASS
Bennett EJ , et al. 2010
CUL1 cullin 1 8454 Q13616 IP; MS; COMPASS
Bennett EJ , et al. 2010
CUL3 cullin 3 8452 B7Z600 IP; MS; COMPASS
Bennett EJ , et al. 2010
CUL4A cullin 4A 8451 Q13619 IP; MS; COMPASS
Bennett EJ , et al. 2010
CUL4B cullin 4B 8450 Q13620 IP; MS; COMPASS
Bennett EJ , et al. 2010
CUL5 cullin 5 8065 Q93034 IP; MS; COMPASS
Bennett EJ , et al. 2010
CWC15 CWC15 spliceosome-associated protein 51503 Q9P013 IP; LC-MS/MS
Li J , et al. 2016
DAPK1 death-associated protein kinase 1 1612 P53355 IP/WB; in vitro ubiquitination assay
Lee YR , et al. 2010
DARS aspartyl-tRNA synthetase 1615 P14868 IP; MS; COMPASS
Bennett EJ , et al. 2010
DAZAP1 DAZ associated protein 1 26528 Q96EP5 IP; MS; COMPASS
Bennett EJ , et al. 2010
DCD dermcidin 117159 P81605 IP; MS; COMPASS
Bennett EJ , et al. 2010
DCTN1 dynactin 1 1639 Q14203 IP; MS; COMPASS
Bennett EJ , et al. 2010
DCTN2 dynactin 2 (p50) 10540 Q13561 IP; MS; COMPASS
Bennett EJ , et al. 2010
DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) 54165 Q96GG9 IP; MS; COMPASS
Bennett EJ , et al. 2010
DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) 54165 Q96GG9 IP; LC-MS/MS
Huttlin EL , et al. 2015
DCUN1D2 DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae) 55208 Q6PH85 LC-MS/MS
Monda JK , et al. 2012
DCUN1D3 DCN1, defective in cullin neddylation 1, domain containing 3 123879 Q8IWE4 LC-MS/MS
Monda JK , et al. 2012
DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 23142 Q92564 LC-MS/MS
Monda JK , et al. 2012
DCUN1D5 DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) 84259 Q9BTE7 LC-MS/MS
Monda JK , et al. 2012
DDB1 damage-specific DNA binding protein 1, 127kDa 1642 Q16531 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDIT3 DNA-damage-inducible transcript 3 1649 P35638 IP/WB
Huang X , et al. 2012
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 1653 A3RJH1 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 10521 Q59F66 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 8886 Q9NVP1 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 9188 Q9NR30 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDX24 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 57062 Q9GZR7 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDX28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 55794 Q9NUL7 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked 1654 O00571 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDX4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 54514 Q9NQI0 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 51428 Q9UJV9 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 9879 Q7L014 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 1655 P17844 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 79009 Q9BQ39 IP; MS; COMPASS
Bennett EJ , et al. 2010
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 1656 P26196 IP; MS; COMPASS
Bennett EJ , et al. 2010
DERL2 derlin 2 51009 Q9GZP9 IP; LC-MS/MS
Li J , et al. 2016
DGCR8 DiGeorge syndrome critical region gene 8 54487 Q8WYQ5 IP; MS; COMPASS
Bennett EJ , et al. 2010
DHX15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 1665 O43143 IP; MS; COMPASS
Bennett EJ , et al. 2010
DHX15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 1665 O43143 IP; LC-MS/MS
Li J , et al. 2016
DHX30 DEAH (Asp-Glu-Ala-His) box polypeptide 30 22907 Q7L2E3 IP; MS; COMPASS
Bennett EJ , et al. 2010
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 170506 Q9H2U1 IP; MS; COMPASS
Bennett EJ , et al. 2010
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 9785 Q92620 IP; MS; COMPASS
Bennett EJ , et al. 2010
DHX8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 1659 Q14562 IP; MS; COMPASS
Bennett EJ , et al. 2010
DHX9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 1660 Q08211 IP; MS; COMPASS
Bennett EJ , et al. 2010
DICER1 dicer 1, ribonuclease type III 23405 Q9UPY3 IP; MS; COMPASS
Bennett EJ , et al. 2010
DIS3 DIS3 mitotic control homolog (S. cerevisiae) 22894 Q9Y2L1 IP; MS; COMPASS
Bennett EJ , et al. 2010
DKC1 dyskeratosis congenita 1, dyskerin 1736 O60832 IP; LC-MS/MS
Li J , et al. 2016
DLG4 DLG4discs, large homolog 4 (Drosophila) 1742 P78352 IP; MS; COMPASS
Bennett EJ , et al. 2010
DLG5 discs, large homolog 5 (Drosophila) 9231 Q8TDM6 IP; MS; COMPASS
Bennett EJ , et al. 2010
DLGAP3 discs, large (Drosophila) homolog-associated protein 3 58512 O95886 IP; MS; COMPASS
Bennett EJ , et al. 2010
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 3301 P31689 IP; MS; COMPASS
Bennett EJ , et al. 2010
DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2 10294 O60884 IP; MS; COMPASS
Bennett EJ , et al. 2010
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3 9093 Q96EY1 IP; MS; COMPASS
Bennett EJ , et al. 2010
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 3337 P25685 IP; MS; COMPASS
Bennett EJ , et al. 2010
DNAJB11 DnaJ (Hsp40) homolog, subfamily B, member 11 51726 Q9UBS4 IP; MS; COMPASS
Bennett EJ , et al. 2010
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 10049 O75190 IP; MS; COMPASS
Bennett EJ , et al. 2010
DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10 54431 Q8IXB1 IP; MS; COMPASS
Bennett EJ , et al. 2010
DNAJC13 DnaJ (Hsp40) homolog, subfamily C, member 13 23317 O75165 IP; MS; COMPASS
Bennett EJ , et al. 2010
DNAJC7 DnaJ (Hsp40) homolog, subfamily C, member 7 7266 Q99615 IP; MS; COMPASS
Bennett EJ , et al. 2010
DNAJC9 DnaJ (Hsp40) homolog, subfamily C, member 9 23234 B2RMW6 IP; MS; COMPASS
Bennett EJ , et al. 2010
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta 1789 Q9UBC3 IP/WB
Shamay M , et al. 2010
DPAGT1 dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) 1798 Q9H3H5 IP; MS; COMPASS
Bennett EJ , et al. 2010
DPF2 D4, zinc and double PHD fingers family 2 5977 Q92785 IP; MS; COMPASS
Bennett EJ , et al. 2010
DROSHA drosha, ribonuclease type III 29102 E7EMP9 IP; MS; COMPASS
Bennett EJ , et al. 2010
DSP desmoplakin 1832 P15924 IP; MS; COMPASS
Bennett EJ , et al. 2010
DUSP6 dual specificity phosphatase 6 1848 Q16828 ChIP
Mathew R , et al. 2012
DUT deoxyuridine triphosphatase 1854 P33316 IP; MS; COMPASS
Bennett EJ , et al. 2010
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 1778 Q14204 IP; MS; COMPASS
Bennett EJ , et al. 2010
DYNC1I1 dynein, cytoplasmic 1, intermediate chain 1 1780 A4D1I7 IP; MS; COMPASS
Bennett EJ , et al. 2010
DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2 1781 Q13409 IP; MS; COMPASS
Bennett EJ , et al. 2010
DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 51143 Q9Y6G9 IP; MS; COMPASS
Bennett EJ , et al. 2010
DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2 1783 O43237 IP; MS; COMPASS
Bennett EJ , et al. 2010
DYNLRB1 dynein, light chain, roadblock-type 1 83658 Q9NP97 IP; MS; COMPASS
Bennett EJ , et al. 2010
DYNLT1 dynein, light chain, Tctex-type 1 6993 P63172 IP; MS; COMPASS
Bennett EJ , et al. 2010
DYRK4 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4 8798 Q9NR20 Y2H
Wang J , et al. 2011
EBNA1BP2 EBNA1 binding protein 2 10969 H7C2Q8 IP; MS; COMPASS
Bennett EJ , et al. 2010
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 1915 P68104 IP; MS; COMPASS
Bennett EJ , et al. 2010
EEF1A2 eukaryotic translation elongation factor 1 alpha 2 1917 Q05639 IP; MS; COMPASS
Bennett EJ , et al. 2010
EEF1A2 eukaryotic translation elongation factor 1 alpha 2 1917 Q05639 IP; LC-MS/MS
Li J , et al. 2016
EEF1B2 eukaryotic translation elongation factor 1 beta 2 1933 P24534 IP; MS; COMPASS
Bennett EJ , et al. 2010
EEF1G eukaryotic translation elongation factor 1 gamma 1937 P26641 IP; MS; COMPASS
Bennett EJ , et al. 2010
EEF2 eukaryotic translation elongation factor 2 1938 P13639 IP; MS; COMPASS
Bennett EJ , et al. 2010
EFNB1 ephrin-B1 1947 P98172 Y2H
Wang J , et al. 2011
EFTUD2 elongation factor Tu GTP binding domain containing 2 9343 B3KX19 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF1AY eukaryotic translation initiation factor 1A, Y-linked 9086 O14602 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 5610 P19525 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF2D eukaryotic translation initiation factor 2D 1939 P41214 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF3C eukaryotic translation initiation factor 3, subunit C 8663 Q99613 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF3CL eukaryotic translation initiation factor 3, subunit C-like 728689 B5ME19 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF3G eukaryotic translation initiation factor 3, subunit G 8666 O75821 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF3I eukaryotic translation initiation factor 3, subunit I 8668 Q13347 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF4A1 eukaryotic translation initiation factor 4A1 1973 P60842 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF4A3 eukaryotic translation initiation factor 4A3 9775 P38919 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF4B eukaryotic translation initiation factor 4B 1975 P23588 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 1978 Q13541 IP/WB; in vitro ubiquitination assay
Yanagiya A , et al. 2012
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 1981 Q04637 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF5A2 eukaryotic translation initiation factor 5A2 56648 Q9GZV4 IP; MS; COMPASS
Bennett EJ , et al. 2010
EIF6 eukaryotic translation initiation factor 6 3692 P56537 IP; MS; COMPASS
Bennett EJ , et al. 2010
ELAVL1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) 1994 Q15717 IP; MS; COMPASS
Bennett EJ , et al. 2010
ELAVL2 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 1993 Q12926 IP; MS; COMPASS
Bennett EJ , et al. 2010
EMC1 ER membrane protein complex subunit 1 23065 Q8N766 IP; MS; COMPASS
Bennett EJ , et al. 2010
EMD emerin 2010 P50402 IP; MS; COMPASS
Bennett EJ , et al. 2010
ENC1 ectodermal-neural cortex 1 (with BTB domain) 8507 O14682 IP; MS; COMPASS
Bennett EJ , et al. 2010
ENC1 ectodermal-neural cortex 1 (with BTB domain) 8507 O14682 IP; LC-MS/MS
Huttlin EL , et al. 2015
ENO1 enolase 1, (alpha) 2023 E2DRY6 IP; MS; COMPASS
Bennett EJ , et al. 2010
ENO2 enolase 2 (gamma, neuronal) 2026 P09104 IP; MS; COMPASS
Bennett EJ , et al. 2010
EPPK1 epiplakin 1 83481 P58107 IP; MS; COMPASS
Bennett EJ , et al. 2010
EPRS glutamyl-prolyl-tRNA synthetase 2058 P07814 IP; MS; COMPASS
Bennett EJ , et al. 2010
ERAL1 Era G-protein-like 1 (E. coli) 26284 O75616 IP; MS; COMPASS
Bennett EJ , et al. 2010
ERC1 ELKS/RAB6-interacting/CAST family member 1 23085 Q8IUD2 IP; MS; COMPASS
Bennett EJ , et al. 2010
EWSR1 Ewing sarcoma breakpoint region 1 2130 Q01844 IP; MS; COMPASS
Bennett EJ , et al. 2010
EXOSC10 exosome component 10 5394 Q01780 IP; MS; COMPASS
Bennett EJ , et al. 2010
EXOSC5 exosome component 5 56915 Q9NQT4 IP; MS; COMPASS
Bennett EJ , et al. 2010
EXOSC6 exosome component 6 118460 Q5RKV6 IP; MS; COMPASS
Bennett EJ , et al. 2010
EXOSC9 exosome component 9 5393 Q06265 IP; MS; COMPASS
Bennett EJ , et al. 2010
FADD Fas (TNFRSF6)-associated via death domain 8772 Q13158 IP/WB
Gonzalvez F , et al. 2012
FAF1 Fas (TNFRSF6) associated factor 1 11124 Q9UNN5 IP/WB
Alexandru G , et al. 2008
FAF2 Fas associated factor family member 2 23197 Q96CS3 IP/WB
Alexandru G , et al. 2008
FAM103A1 family with sequence similarity 103, member A1 83640 Q9BTL3 IP; MS; COMPASS
Bennett EJ , et al. 2010
FAM120A family with sequence similarity 120A 23196 Q9NZB2 IP; MS; COMPASS
Bennett EJ , et al. 2010
FAM120B family with sequence similarity 120B 84498 Q96EK7 IP; MS; COMPASS
Bennett EJ , et al. 2010
FAM208B family with sequence similarity 208, member B 54906 Q5VWN6 IP; MS; COMPASS
Bennett EJ , et al. 2010
FAM98A family with sequence similarity 98, member A 25940 I6L9E8 IP; MS; COMPASS
Bennett EJ , et al. 2010
FAM98B family with sequence similarity 98, member B 283742 Q52LJ0 IP; MS; COMPASS
Bennett EJ , et al. 2010
FANCI Fanconi anemia, complementation group I 55215 Q9NVI1 IP; MS; COMPASS
Bennett EJ , et al. 2010
FAR1 fatty acyl CoA reductase 1 84188 Q8WVX9 IP; MS; COMPASS
Bennett EJ , et al. 2010
FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial 10667 O95363 IP; MS; COMPASS
Bennett EJ , et al. 2010
FARSA phenylalanyl-tRNA synthetase, alpha subunit 2193 Q6IBR2 IP; MS; COMPASS
Bennett EJ , et al. 2010
FASN fatty acid synthase 2194 P49327 IP; MS; COMPASS
Bennett EJ , et al. 2010
FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed 2197 P35544 IP; MS; COMPASS
Bennett EJ , et al. 2010
FBF1 Fas (TNFRSF6) binding factor 1 85302 Q8TES7 IP; MS; COMPASS
Bennett EJ , et al. 2010
FBL fibrillarin 2091 P22087 IP; MS; COMPASS
Bennett EJ , et al. 2010
FBXL17 F-box and leucine-rich repeat protein 17 64839 Q9UF56 IP; MS; COMPASS
Bennett EJ , et al. 2010
FBXO3 F-box protein 3 26273 Q49AF1 IP; MS; COMPASS
Bennett EJ , et al. 2010
FECH ferrochelatase 2235 P22830 IP; MS; COMPASS
Bennett EJ , et al. 2010
FKBP8 FK506 binding protein 8, 38kDa 23770 Q14318 IP; MS; COMPASS
Bennett EJ , et al. 2010
FLNA filamin A, alpha 2316 P21333 IP; MS; COMPASS
Bennett EJ , et al. 2010
FLNC filamin C, gamma 2318 Q14315 IP; MS; COMPASS
Bennett EJ , et al. 2010
FLOT2 flotillin 2 2319 Q14254 IP; LC-MS/MS
Li J , et al. 2016
FMR1 fragile X mental retardation 1 2332 G8JLE9 PAR-CLIP
Ascano M Jr , et al. 2012
FN3KRP fructosamine 3 kinase related protein 79672 Q9HA64 IP; MS; COMPASS
Bennett EJ , et al. 2010
FOLR1 folate receptor 1 (adult) 2348 P15328 Y2H
Wang J , et al. 2011
FTSJ1 FtsJ RNA methyltransferase homolog 1 (E. coli) 24140 B3KN91 IP; MS; COMPASS
Bennett EJ , et al. 2010
FTSJ3 FtsJ homolog 3 (E. coli) 117246 Q8IY81 IP; MS; COMPASS
Bennett EJ , et al. 2010
FTSJ3 FtsJ homolog 3 (E. coli) 117246 Q8IY81 IP; LC-MS/MS
Li J , et al. 2016
FTSJD2 FtsJ methyltransferase domain containing 2 23070 Q8N1G2 IP; MS; COMPASS
Bennett EJ , et al. 2010
FUBP1 far upstream element (FUSE) binding protein 1 8880 Q96AE4 IP; MS; COMPASS
Bennett EJ , et al. 2010
FUCA1 fucosidase, alpha-L- 1, tissue 2517 P04066 IP; MS; COMPASS
Bennett EJ , et al. 2010
FUCA2 fucosidase, alpha-L- 2, plasma 2519 Q9BTY2 IP; MS; COMPASS
Bennett EJ , et al. 2010
FUS fused in sarcoma 2521 P35637 IP; MS; COMPASS
Bennett EJ , et al. 2010
FXR1 Fragile X retardation 1 8087 P51114 IP; MS; COMPASS
Bennett EJ , et al. 2010
FXR2 Fragile X retardation 2 9513 P51116 IP; MS; COMPASS
Bennett EJ , et al. 2010
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 10146 Q13283 IP; MS; COMPASS
Bennett EJ , et al. 2010
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 9908 Q9UN86 IP; MS; COMPASS
Bennett EJ , et al. 2010
GABARAP GABA(A) receptor-associated protein 11337 O95166 IP/WB
Genau HM , et al. 2015
GABARAPL1 GABA(A) receptor-associated protein like 1 23710 Q9H0R8 IP; MS; COMPASS
Behrends C , et al. 2010
GABARAPL1 GABA(A) receptor-associated protein like 1 23710 Q9H0R8 IP/WB
Genau HM , et al. 2015
GABARAPL2 GABA(A) receptor-associated protein-like 2 11345 P60520 IP; MS; COMPASS
Behrends C , et al. 2010
GABARAPL2 GABA(A) receptor-associated protein-like 2 11345 P60520 IP/WB
Genau HM , et al. 2015
GALK1 galactokinase 1 2584 P51570 IP; MS; COMPASS
Bennett EJ , et al. 2010
GAN gigaxonin 8139 B3KTC3 IP; MS; COMPASS
Bennett EJ , et al. 2010
GAPDH glyceraldehyde-3-phosphate dehydrogenase 2597 P04406 IP; MS; COMPASS
Bennett EJ , et al. 2010
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 2618 P22102 IP; MS; COMPASS
Bennett EJ , et al. 2010
GBAS glioblastoma amplified sequence 2631 O75323 IP; MS; COMPASS
Bennett EJ , et al. 2010
GCAT glycine C-acetyltransferase 23464 O75600 IP; MS; COMPASS
Bennett EJ , et al. 2010
GCLM glutamate-cysteine ligase, modifier subunit 2730 P48507 IP; MS; COMPASS
Bennett EJ , et al. 2010
GEMIN5 gem (nuclear organelle) associated protein 5 25929 B7ZLC9 IP; MS; COMPASS
Bennett EJ , et al. 2010
GFPT2 glutamine-fructose-6-phosphate transaminase 2 9945 O94808 IP; MS; COMPASS
Bennett EJ , et al. 2010
GLIS3 GLIS family zinc finger 3 169792 Q1PHJ8 IP/WB
ZeRuth GT , et al. 2011
GLMN glomulin, FKBP associated protein 11146 Q92990 IP/WB
Tron AE , et al. 2012
GLUD1 glutamate dehydrogenase 1 2746 E9KL48 IP; MS; COMPASS
Bennett EJ , et al. 2010
GMCL1 germ cell-less, spermatogenesis associated 1 64395 Q53SE7 IP; MS; COMPASS
Bennett EJ , et al. 2010
GMCL1 germ cell-less, spermatogenesis associated 1 64395 Q53SE7 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
GMPPA GDP-mannose pyrophosphorylase A 29926 Q96IJ6 IP; MS; COMPASS
Bennett EJ , et al. 2010
GMPS guanine monphosphate synthetase 8833 A8K639 IP; MS; COMPASS
Bennett EJ , et al. 2010
GNB2L1 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 10399 P63244 IP; MS; COMPASS
Bennett EJ , et al. 2010
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) 26354 Q9BVP2 IP; MS; COMPASS
Bennett EJ , et al. 2010
GORASP2 golgi reassembly stacking protein 2, 55kDa 26003 Q9H8Y8 PCP; SILAC
Kristensen AR , et al. 2012
GPATCH4 G patch domain containing 4 54865 A8KAG1 IP; MS; COMPASS
Bennett EJ , et al. 2010
GPN1 GPN-loop GTPase 1 11321 B5MBZ5 IP; MS; COMPASS
Bennett EJ , et al. 2010
GPRASP2 G protein-coupled receptor associated sorting protein 2 114928 Q96D09 IP; MS; COMPASS
Bennett EJ , et al. 2010
GPS1 G protein pathway suppressor 1 2873 Q13098 IP; MS; COMPASS
Bennett EJ , et al. 2010
GPS1 G protein pathway suppressor 1 2873 Q13098 IP; LC-MS/MS
Huttlin EL , et al. 2015
GPSM1 G-protein signaling modulator 1 26086 Q86YR5 IP; MS; COMPASS
Bennett EJ , et al. 2010
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2 84706 Q8TD30 IP; MS; COMPASS
Bennett EJ , et al. 2010
GRB2 growth factor receptor-bound protein 2 2885 P62993 IP; MS; COMPASS
Bennett EJ , et al. 2010
GRSF1 G-rich RNA sequence binding factor 1 2926 Q12849 IP; MS; COMPASS
Bennett EJ , et al. 2010
GRWD1 glutamate-rich WD repeat containing 1 83743 Q9BQ67 IP; MS; COMPASS
Bennett EJ , et al. 2010
GSTP1 glutathione S-transferase pi 1 2950 P09211 IP; MS; COMPASS
Bennett EJ , et al. 2010
GTF2I general transcription factor IIi 2969 P78347 IP; MS; COMPASS
Bennett EJ , et al. 2010
GTF3C5 general transcription factor IIIC, polypeptide 5, 63kDa 9328 Q9Y5Q8 IP; MS; COMPASS
Bennett EJ , et al. 2010
GTPBP1 GTP binding protein 1 9567 O00178 IP; MS; COMPASS
Bennett EJ , et al. 2010
GVINP1 GTPase, very large interferon inducible pseudogene 1 387751 Q7Z2Y8 IP; MS; COMPASS
Bennett EJ , et al. 2010
H2AFV H2A histone family, member V 94239 Q71UI9 IP; MS; COMPASS
Bennett EJ , et al. 2010
H2AFY H2A histone family, member Y 9555 O75367 IP/WB
Hernndez-Muoz I , et al. 2005
HAT1 histone acetyltransferase 1 8520 O14929 IP; MS; COMPASS
Bennett EJ , et al. 2010
HAX1 HCLS1 associated protein X-1 10456 O00165 IP; MS; COMPASS
Bennett EJ , et al. 2010
HBS1L HBS1-like (S. cerevisiae) 10767 Q9Y450 IP; MS; COMPASS
Bennett EJ , et al. 2010
HCFC1 host cell factor C1 (VP16-accessory protein) 3054 P51610 IP; MS; COMPASS
Bennett EJ , et al. 2010
HDAC1 histone deacetylase 1 3065 Q13547 IP/WB; in vitro ubiquitination assay
Canettieri G , et al. 2010
HIST1H1C histone cluster 1, H1c 3006 P16403 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST1H4A histone cluster 1, H4a 8359 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST1H4B histone cluster 1, H4b 8366 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST1H4C histone cluster 1, H4c 8364 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST1H4D histone cluster 1, H4d 8360 P62805 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST1H4E histone cluster 1, H4e 8367 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST1H4F histone cluster 1, H4f 8361 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST1H4H histone cluster 1, H4h 8365 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST1H4I histone cluster 1, H4i 8294 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST1H4J histone cluster 1, H4j 8363 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST1H4K histone cluster 1, H4k 8362 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST1H4L histone cluster 1, H4l 8368 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST2H2BE histone cluster 2, H2be 8349 Q16778 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST2H4A histone cluster 2, H4a 8370 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST2H4B histone cluster 2, H4b 554313 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HIST4H4 histone cluster 4, H4 121504 B2R4R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HLA-DMB major histocompatibility complex, class II, DM beta 3109 P28068 Y2H
Wang J , et al. 2011
HLA-H major histocompatibility complex, class I, H (pseudogene) 3136 P01893 IP; MS; COMPASS
Bennett EJ , et al. 2010
HMGB3P1 high mobility group box 3 pseudogene 1 128872 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 10949 Q13151 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 3178 P09651 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 3181 P22626 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 220988 P51991 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 3182 Q99729 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 3183 P07910 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPCL1 heterogeneous nuclear ribonucleoprotein C-like 1 343069 O60812 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 3184 Q14103 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPF eterogeneous nuclear ribonucleoprotein F 3185 P52597 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 3187 P31943 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H') 3188 P55795 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 3189 P31942 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPK heterogeneous nuclear ribonucleoprotein K 3190 P61978 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPL heterogeneous nuclear ribonucleoprotein L 3191 P14866 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPM heterogeneous nuclear ribonucleoprotein M 4670 P52272 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPR heterogeneous nuclear ribonucleoprotein R 10236 O43390 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 3192 Q00839 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 11100 Q9BUJ2 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2 221092 Q1KMD3 IP; MS; COMPASS
Bennett EJ , et al. 2010
HNRPDL heterogeneous nuclear ribonucleoprotein D-like 9987 O14979 IP; MS; COMPASS
Bennett EJ , et al. 2010
HOOK2 hook homolog 2 (Drosophila) 29911 Q96ED9 IP; MS; COMPASS
Bennett EJ , et al. 2010
HOOK3 hook homolog 3 (Drosophila) 84376 Q86VS8 IP; MS; COMPASS
Bennett EJ , et al. 2010
HP1BP3 heterochromatin protein 1, binding protein 3 50809 Q5SSJ5 IP; MS; COMPASS
Bennett EJ , et al. 2010
HPRT1 hypoxanthine phosphoribosyltransferase 1 3251 P00492 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSD17B10 hydroxysteroid (17-beta) dehydrogenase 10 3028 Q99714 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSF2 heat shock transcription factor 2 3298 Q03933 Y2H; IP/WB
Xing H , et al. 2009
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 3320 P07900 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSP90AA2 heat shock protein 90kDa alpha (cytosolic), class A member 2 3324 Q14568 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 3326 P08238 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSP90AB2P heat shock protein 90kDa alpha (cytosolic), class B member 2, pseudogene 391634 Q58FF8 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSP90AB3P heat shock protein 90kDa alpha family class B member 3, pseudogene 3327 Q58FF7 IP; LC-MS/MS
Li J , et al. 2016
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 7184 P14625 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSPA1A heat shock 70kDa protein 1A 3303 P08107 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSPA1B heat shock 70kDa protein 1B 3304 A8K5I0 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSPA1L heat shock 70kDa protein 1-like 3305 P34931 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSPA4 heat shock 70kDa protein 4 3308 P34932 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 3309 Q2KHP4 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSPA8 heat shock 70kDa protein 8 3312 P11142 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSPA9 heat shock 70kDa protein 9 (mortalin) 3313 P38646 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSPB1 heat shock 27kDa protein 1 3315 P04792 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSPD1 heat shock 60kDa protein 1 (chaperonin) 3329 P10809 IP; MS; COMPASS
Bennett EJ , et al. 2010
HSPH1 heat shock 105kDa/110kDa protein 1 10808 Q92598 IP; MS; COMPASS
Bennett EJ , et al. 2010
HTATSF1 HIV-1 Tat specific factor 1 27336 O43719 IP; MS; COMPASS
Bennett EJ , et al. 2010
HTR7 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled 3363 P34969 IP/WB
Matthys A , et al. 2012
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 10075 Q7Z6Z7 IP; MS; COMPASS
Bennett EJ , et al. 2010
IARS isoleucyl-tRNA synthetase 3376 P41252 IP; MS; COMPASS
Bennett EJ , et al. 2010
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 25998 Q9P2D0 IP; MS; COMPASS
Bennett EJ , et al. 2010
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 25998 Q9P2D0 IP/WB; In vivo ubiquitination assay
Pisano A , et al. 2015
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 25998 Q9P2D0 IP; LC-MS/MS
Huttlin EL , et al. 2015
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 3398 Q02363 ChIP
Mathew R , et al. 2012
IFNAR1 interferon (alpha, beta and omega) receptor 1 3454 P17181 ChIP
Mathew R , et al. 2012
IGF2BP1 insulin-like growth factor 2 mRNA binding protein 1 10642 Q9NZI8 IP; MS; COMPASS
Bennett EJ , et al. 2010
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 10644 Q9Y6M1 IP; MS; COMPASS
Bennett EJ , et al. 2010
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 10643 O00425 IP; MS; COMPASS
Bennett EJ , et al. 2010
IKBKAP inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein 8518 O95163 IP; MS; COMPASS
Bennett EJ , et al. 2010
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 3551 O14920 IP/WB
Lee DF , et al. 2009
ILF2 interleukin enhancer binding factor 2 3608 Q12905 IP; MS; COMPASS
Bennett EJ , et al. 2010
ILF3 interleukin enhancer binding factor 3, 90kDa 3609 Q12906 IP; MS; COMPASS
Bennett EJ , et al. 2010
ILK integrin-linked kinase 3611 Q13418 IP; MS; COMPASS
Bennett EJ , et al. 2010
ILVBL ilvB (bacterial acetolactate synthase)-like 10994 A1L0T0 IP; MS; COMPASS
Bennett EJ , et al. 2010
IMPDH2 IMP (inosine 5'-monophosphate) dehydrogenase 2 3615 P12268 IP; MS; COMPASS
Bennett EJ , et al. 2010
IPO4 importin 4 79711 B3KT38 IP; MS; COMPASS
Bennett EJ , et al. 2010
IPO5 importin 5 3843 B3KWG6 IP; MS; COMPASS
Bennett EJ , et al. 2010
IPO8 importin 8 10526 O15397 IP; MS; COMPASS
Bennett EJ , et al. 2010
IPP intracisternal A particle-promoted polypeptide 3652 A2A6V3 IP; MS; COMPASS
Bennett EJ , et al. 2010
IPP intracisternal A particle-promoted polypeptide 3652 A2A6V3 IP; LC-MS/MS
Huttlin EL , et al. 2015
IRAK1 interleukin-1 receptor-associated kinase 1 3654 P51617 IP; MS; COMPASS
Bennett EJ , et al. 2010
IRS4 insulin receptor substrate 4 8471 O14654 IP; MS; COMPASS
Bennett EJ , et al. 2010
ITCH itchy E3 ubiquitin protein ligase 83737 Q96J02 IP; MS; COMPASS
Bennett EJ , et al. 2010
KAT5 K(lysine) acetyltransferase 5 10524 Q92993 IP/WB
Bhoumik A , et al. 2008
KATNA1 katanin p60 (ATPase containing) subunit A 1 11104 O75449 IP/WB; in vitro ubiquitination assay
Cummings CM , et al. 2009
KBTBD13 kelch repeat and BTB (POZ) domain containing 13 390594 C9JR72 Size-exclusion chromatography (SEC); Sedimentation equilibrium analysis; IP/WB; in vitro ubiquitination assay
Sambuughin N , et al. 2012
KBTBD2 kelch repeat and BTB (POZ) domain containing 2 25948 Q8IY47 IP; MS; COMPASS
Bennett EJ , et al. 2010
KBTBD2 kelch repeat and BTB (POZ) domain containing 2 25948 Q8IY47 IP; LC-MS/MS
Huttlin EL , et al. 2015
KBTBD4 kelch repeat and BTB (POZ) domain containing 4 55709 Q9NVX7 IP; MS; COMPASS
Bennett EJ , et al. 2010
KBTBD4 kelch repeat and BTB (POZ) domain containing 4 55709 Q9NVX7 IP; LC-MS/MS
Huttlin EL , et al. 2015
KBTBD6 kelch repeat and BTB (POZ) domain containing 6 89890 Q86V97 in vitro ubiquitination assay; in vitro binding assay; Immunofluorescence; IP/WB
IP; MS; COMPASS
Bennett EJ , et al. 2010
KBTBD6 kelch repeat and BTB (POZ) domain containing 6 89890 Q86V97 IP/WB
Genau HM , et al. 2015
KBTBD6 kelch repeat and BTB (POZ) domain containing 6 89890 Q86V97 IP; LC-MS/MS
Huttlin EL , et al. 2015
KBTBD7 kelch repeat and BTB (POZ) domain containing 7 84078 Q8WVZ9 in vitro ubiquitination assay; in vitro binding assay; Immunofluorescence; IP/WB
IP; MS; COMPASS
Bennett EJ , et al. 2010
KBTBD7 kelch repeat and BTB (POZ) domain containing 7 84078 Q8WVZ9 IP/WB
Genau HM , et al. 2015
KBTBD7 kelch repeat and BTB (POZ) domain containing 7 84078 Q8WVZ9 IP; LC-MS/MS
Huttlin EL , et al. 2015
KBTBD8 kelch repeat and BTB (POZ) domain containing 8 84541 Q8NFY9 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD10 potassium channel tetramerisation domain containing 10 83892 Q9H3F6 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD10 potassium channel tetramerisation domain containing 10 83892 Q9H3F6 IP; LC-MS/MS
Huttlin EL , et al. 2015
KCTD11 potassium channel tetramerisation domain containing 11 147040 Q693B1 IP/WB
Canettieri G , et al. 2010
KCTD12 potassium channel tetramerisation domain containing 12 115207 Q96CX2 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD13 potassium channel tetramerisation domain containing 13 253980 Q8WZ19 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD13 potassium channel tetramerisation domain containing 13 253980 Q8WZ19 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
KCTD13 potassium channel tetramerisation domain containing 13 253980 Q8WZ19 Lin GN , et al. 2015
KCTD13 potassium channel tetramerisation domain containing 13 253980 Q8WZ19 IP; LC-MS/MS
Huttlin EL , et al. 2015
KCTD17 potassium channel tetramerisation domain containing 17 79734 Q8N5Z5 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD18 potassium channel tetramerisation domain containing 18 130535 Q6PI47 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD2 potassium channel tetramerisation domain containing 2 23510 Q14681 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD2 potassium channel tetramerisation domain containing 2 23510 Q14681 IP; LC-MS/MS
Huttlin EL , et al. 2015
KCTD20 potassium channel tetramerisation domain containing 20 222658 Q7Z5Y7 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD20 potassium channel tetramerisation domain containing 20 222658 Q7Z5Y7 IP; LC-MS/MS
Huttlin EL , et al. 2015
KCTD21 potassium channel tetramerisation domain containing 21 283219 Q4G0X4 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD3 potassium channel tetramerisation domain containing 3 51133 Q9Y597 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD3 potassium channel tetramerisation domain containing 3 51133 Q9Y597 IP; LC-MS/MS
Huttlin EL , et al. 2015
KCTD5 potassium channel tetramerisation domain containing 5 54442 Q9NXV2 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD6 potassium channel tetramerisation domain containing 6 200845 Q8NC69 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD6 potassium channel tetramerisation domain containing 6 200845 Q8NC69 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
KCTD6 potassium channel tetramerisation domain containing 6 200845 Q8NC69 IP; LC-MS/MS
Huttlin EL , et al. 2015
KCTD7 potassium channel tetramerisation domain containing 7 154881 Q96MP8 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD9 potassium channel tetramerisation domain containing 9 54793 Q7L273 IP; MS; COMPASS
Bennett EJ , et al. 2010
KCTD9 potassium channel tetramerisation domain containing 9 54793 Q7L273 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
KCTD9 potassium channel tetramerisation domain containing 9 54793 Q7L273 IP; LC-MS/MS
Huttlin EL , et al. 2015
KDELC1 KDEL (Lys-Asp-Glu-Leu) containing 1 79070 Q6UW63 IP; MS; COMPASS
Bennett EJ , et al. 2010
KEAP1 kelch-like ECH-associated protein 1 9817 Q14145 IP; MS; COMPASS
Bennett EJ , et al. 2010
KEL Kell blood group, metallo-endopeptidase 3792 P23276 IP; MS; COMPASS
Bennett EJ , et al. 2010
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 10657 Q07666 IP; MS; COMPASS
Bennett EJ , et al. 2010
KHSRP KH-type splicing regulatory protein 8570 Q92945 IP; MS; COMPASS
Bennett EJ , et al. 2010
KIAA0020 KIAA0020 9933 Q15397 IP; MS; COMPASS
Bennett EJ , et al. 2010
KIAA1967 KIAA1967 57805 Q8N163 IP; MS; COMPASS
Bennett EJ , et al. 2010
KIF13B kinesin family member 13B 23303 F8VPJ2 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHDC5 kelch-like family member 42 57542 B2RNT7 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL10 Kelch-like protein 10 317719 Q6JEL2 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL11 kelch-like family member 11 55175 Q9NVR0 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL11 kelch-like family member 11 55175 Q9NVR0 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL12 kelch-like family member 12 59349 Q53G59 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL12 kelch-like family member 12 59349 Q53G59 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
KLHL13 kelch-like family member 13 90293 Q96HC9 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL15 kelch-like family member 15 80311 Q96M94 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL15 kelch-like family member 15 80311 Q96M94 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL17 kelch-like family member 17 339451 Q6TDP4 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL18 kelch-like family member 18 23276 O94889 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL18 kelch-like family member 18 23276 O94889 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL2 kelch-like family member 2 11275 O95198 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL2 kelch-like family member 2 11275 O95198 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
KLHL2 kelch-like family member 2 11275 O95198 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL20 kelch-like family member 20 27252 Q9Y2M5 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL20 kelch-like family member 20 27252 Q9Y2M5 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL21 kelch-like family member 21 9903 Q9UJP4 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL21 kelch-like family member 21 9903 Q9UJP4 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL22 kelch-like family member 22 84861 Q53GT1 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL22 kelch-like family member 22 84861 Q53GT1 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL23 kelch-like family member 23 151230 Q8NBE8 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL23 kelch-like family member 23 151230 Q8NBE8 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL24 kelch-like family member 24 54800 Q6TFL4 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL24 kelch-like family member 24 54800 Q6TFL4 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL25 kelch-like family member 25 64410 Q9H0H3 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL25 kelch-like family member 25 64410 Q9H0H3 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL26 kelch-like family member 26 55295 Q53HC5 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL26 kelch-like family member 26 55295 Q53HC5 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL28 kelch-like 28 (Drosophila) 54813 Q9NXS3 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL28 kelch-like 28 (Drosophila) 54813 Q9NXS3 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL3 kelch-like family member 3 26249 Q9UH77 X-ray crystallography
Ji AX and Priv GG 2013
KLHL3 kelch-like family member 3 26249 Q9UH77 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
KLHL36 kelch-like family member 36 79786 Q8N4N3 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL36 kelch-like family member 36 79786 Q8N4N3 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL4 kelch-like family member 4 56062 A5PKX1 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL41 kelch-like family member 41 10324 O60662 Chitin pulldown
Zhang DD , et al. 2005
KLHL42 kelch-like family member 42 57542 B2RNT7 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL5 kelch-like family member 5 51088 G3XA92 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL7 kelch-like family member 7 55975 A8K364 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL7 kelch-like family member 7 55975 A8K364 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL8 kelch-like family member 8 57563 Q49A95 IP; MS; COMPASS
Bennett EJ , et al. 2010
KLHL8 kelch-like family member 8 57563 Q49A95 IP; LC-MS/MS
Huttlin EL , et al. 2015
KLHL9 kelch-like family member 9 55958 Q58EZ4 IP; MS; COMPASS
Bennett EJ , et al. 2010
KNDC1 kinase non-catalytic C-lobe domain (KIND) containing 1 85442 Q5U5J6 IP; MS; COMPASS
Bennett EJ , et al. 2010
KPNA1 karyopherin alpha 1 (importin alpha 5) 3836 P52294 IP; MS; COMPASS
Bennett EJ , et al. 2010
KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) 3838 P52292 IP; MS; COMPASS
Bennett EJ , et al. 2010
KPNA3 karyopherin alpha 3 (importin alpha 4) 3839 O00505 IP; MS; COMPASS
Bennett EJ , et al. 2010
KPNA4 karyopherin alpha 4 (importin alpha 3) 3840 O00629 IP; MS; COMPASS
Bennett EJ , et al. 2010
KPNA5 karyopherin alpha 5 (importin alpha 6) 3841 O15131 IP; MS; COMPASS
Bennett EJ , et al. 2010
KPNA6 karyopherin alpha 6 (importin alpha 7) 23633 O60684 IP; MS; COMPASS
Bennett EJ , et al. 2010
KPNB1 karyopherin (importin) beta 1 3837 Q14974 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) 11103 Q13601 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT1 keratin 1 3848 P04264 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT10 keratin 10 3858 P13645 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT13 keratin 13 3860 P13646 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT14 keratin 14 3861 P02533 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT16 keratin 16 3868 P08779 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT2 keratin 2 3849 P35908 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT24 keratin 24 192666 Q2M2I5 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT31 keratin 31 3881 Q15323 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT33B keratin 33B 3884 Q14525 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT36 keratin 36 8689 O76013 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT4 keratin 4 3851 B4DRS2 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT5 keratin 5 3852 P13647 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT6B keratin 6B 3854 P04259 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT71 keratin 71 112802 Q3SY84 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT75 keratin 75 9119 O95678 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT76 keratin 76 51350 Q01546 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT78 keratin 78 196374 Q8N1N4 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT84 keratin 84 3890 Q9NSB2 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT85 keratin 85 3891 P78386 IP; MS; COMPASS
Bennett EJ , et al. 2010
KRT9 keratin 9 3857 P35527 IP; MS; COMPASS
Bennett EJ , et al. 2010
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) 10314 O43813 IP; MS; COMPASS
Bennett EJ , et al. 2010
LARP1 La ribonucleoprotein domain family, member 1 23367 Q6PKG0 IP; MS; COMPASS
Bennett EJ , et al. 2010
LARP1B La ribonucleoprotein domain family, member 1B 55132 Q659C4 IP; MS; COMPASS
Bennett EJ , et al. 2010
LARP4 La ribonucleoprotein domain family, member 4 113251 Q6P4E2 IP; MS; COMPASS
Bennett EJ , et al. 2010
LARP4B La ribonucleoprotein domain family, member 4B 23185 Q92615 IP; MS; COMPASS
Bennett EJ , et al. 2010
LARS leucyl-tRNA synthetase 51520 Q9P2J5 IP; MS; COMPASS
Bennett EJ , et al. 2010
LARS leucyl-tRNA synthetase 51520 Q9P2J5 IP; LC-MS/MS
Li J , et al. 2016
LAS1L LAS1-like (S. cerevisiae) 81887 Q9Y4W2 IP; MS; COMPASS
Bennett EJ , et al. 2010
LDHA lactate dehydrogenase A 3939 P00338 IP; MS; COMPASS
Bennett EJ , et al. 2010
LDHB lactate dehydrogenase B 3945 P07195 IP; MS; COMPASS
Bennett EJ , et al. 2010
LDHD lactate dehydrogenase D 197257 Q86WU2 IP; MS; COMPASS
Bennett EJ , et al. 2010
LEPRE1 leucine proline-enriched proteoglycan (leprecan) 1 64175 Q32P28 IP; MS; COMPASS
Bennett EJ , et al. 2010
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 3959 Q08380 IP; MS; COMPASS
Bennett EJ , et al. 2010
LLGL1 lethal giant larvae homolog 1 (Drosophila) 3996 Q15334 IP; MS; COMPASS
Bennett EJ , et al. 2010
LOC646057 646057 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
LOC646377 646377 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
LOC647013 647013 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
LPL lipoprotein lipase 4023 P06858 IP; MS; COMPASS
Bennett EJ , et al. 2010
LRRC42 leucine rich repeat containing 42 115353 Q9Y546 IP; MS; COMPASS
Bennett EJ , et al. 2010
LRRC42 leucine rich repeat containing 42 115353 Q9Y546 IP; LC-MS/MS
Huttlin EL , et al. 2015
LSM12 LSM12 homolog (S. cerevisiae) 124801 Q3MHD2 IP; MS; COMPASS
Bennett EJ , et al. 2010
LUC7L2 LUC7-like 2 (S. cerevisiae) 51631 Q9Y383 IP; MS; COMPASS
Bennett EJ , et al. 2010
LYAR Ly1 antibody reactive 55646 Q9NX58 IP; MS; COMPASS
Bennett EJ , et al. 2010
LZTR1 leucine-zipper-like transcription regulator 1 8216 Q8N653 IP; MS; COMPASS
Bennett EJ , et al. 2010
MACF1 microtubule-actin crosslinking factor 1 23499 Q9UPN3 IP; MS; COMPASS
Bennett EJ , et al. 2010
MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast) 4085 Q13257 IP; MS; COMPASS
Bennett EJ , et al. 2010
MAGED1 melanoma antigen family D, 1 9500 Q9Y5V3 IP; MS; COMPASS
Bennett EJ , et al. 2010
MAGED2 melanoma antigen family D, 2 10916 Q9UNF1 IP; MS; COMPASS
Bennett EJ , et al. 2010
MAP1B microtubule-associated protein 1B 4131 P46821 IP; MS; COMPASS
Bennett EJ , et al. 2010
MAP1LC3A microtubule-associated protein 1 light chain 3 alpha 84557 Q9H492 IP/WB
Genau HM , et al. 2015
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 81631 Q9GZQ8 IP/WB
Genau HM , et al. 2015
MAP1LC3C microtubule-associated protein 1 light chain 3 gamma 440738 Q9BXW4 IP/WB
Genau HM , et al. 2015
MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2 9261 P49137 IP; MS; COMPASS
Bennett EJ , et al. 2010
MARS methionyl-tRNA synthetase 4141 P56192 IP; MS; COMPASS
Bennett EJ , et al. 2010
MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 5648 P48740 IP; MS; COMPASS
Bennett EJ , et al. 2010
MAT2A methionine adenosyltransferase II, alpha 4144 P31153 IP; MS; COMPASS
Bennett EJ , et al. 2010
MATR3 matrin 3 9782 P43243 IP; MS; COMPASS
Bennett EJ , et al. 2010
MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta) 64087 Q9HCC0 IP; MS; COMPASS
Bennett EJ , et al. 2010
MCM3 minichromosome maintenance complex component 3 4172 P25205 IP; MS; COMPASS
Bennett EJ , et al. 2010
MCM4 minichromosome maintenance complex component 4 4173 P33991 IP; LC-MS/MS
Li J , et al. 2016
MCM6 minichromosome maintenance complex component 6 4175 Q14566 IP; MS; COMPASS
Bennett EJ , et al. 2010
MCM7 minichromosome maintenance complex component 7 4176 P33993 IP; MS; COMPASS
Bennett EJ , et al. 2010
MCMBP minichromosome maintenance complex binding protein 79892 Q9BTE3 IP; MS; COMPASS
Bennett EJ , et al. 2010
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 4199 P48163 PCP; SILAC
Kristensen AR , et al. 2012
MEMO1 mediator of cell motility 1 51072 Q9Y316 IP; MS; COMPASS
Bennett EJ , et al. 2010
MEPCE methylphosphate capping enzyme 56257 Q7L2J0 IP; MS; COMPASS
Bennett EJ , et al. 2010
METTL13 methyltransferase like 13 51603 Q8N6R0 IP; MS; COMPASS
Bennett EJ , et al. 2010
METTL15 methyltransferase like 15 76894 Q9DCL4 IP; MS; COMPASS
Bennett EJ , et al. 2010
MIPEP mitochondrial intermediate peptidase 4285 Q99797 IP; MS; COMPASS
Bennett EJ , et al. 2010
MKI67IP MKI67 (FHA domain) interacting nucleolar phosphoprotein 84365 Q9BYG3 IP; MS; COMPASS
Bennett EJ , et al. 2010
MLLT11 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 10962 Q13015 IP; MS; COMPASS
Bennett EJ , et al. 2010
MLLT6 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 4302 P55198 IP; MS; COMPASS
Bennett EJ , et al. 2010
MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae) 64210 Q96T76 IP; MS; COMPASS
Bennett EJ , et al. 2010
MOV10 Mov10, Moloney leukemia virus 10, homolog (mouse) 4343 Q9HCE1 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL1 mitochondrial ribosomal protein L1 65008 Q9BYD6 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL11 mitochondrial ribosomal protein L11 65003 Q9Y3B7 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL12 mitochondrial ribosomal protein L12 6182 P52815 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL14 mitochondrial ribosomal protein L14 64928 Q6P1L8 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL19 mitochondrial ribosomal protein L19 9801 P49406 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL2 mitochondrial ribosomal protein L2 51069 Q5T653 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL21 mitochondrial ribosomal protein L21 219927 Q7Z2W9 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL24 mitochondrial ribosomal protein L24 79590 Q96A35 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL28 mitochondrial ribosomal protein L28 10573 Q13084 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL37 mitochondrial ribosomal protein L37 51253 Q9BZE1 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL39 mitochondrial ribosomal protein L39 54148 Q9NYK5 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL4 mitochondrial ribosomal protein L4 51073 Q9BYD3 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL44 mitochondrial ribosomal protein L44 65080 Q9H9J2 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL45 mitochondrial ribosomal protein L45 84311 Q9BRJ2 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL49 mitochondrial ribosomal protein L49 740 Q13405 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPL50 mitochondrial ribosomal protein L50 54534 Q8N5N7 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS11 mitochondrial ribosomal protein S11 64963 P82912 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS15 mitochondrial ribosomal protein S15 64960 P82914 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS18B mitochondrial ribosomal protein S18B 28973 B0S7P4 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS21 mitochondrial ribosomal protein S21 54460 P82921 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS22 mitochondrial ribosomal protein S22 56945 P82650 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS23 mitochondrial ribosomal protein S23 51649 Q9Y3D9 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS26 mitochondrial ribosomal protein S26 64949 Q9BYN8 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS27 mitochondrial ribosomal protein S27 23107 Q92552 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS31 mitochondrial ribosomal protein S31 10240 Q92665 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS34 mitochondrial ribosomal protein S34 65993 P82930 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS35 mitochondrial ribosomal protein S35 60488 P82673 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS5 mitochondrial ribosomal protein S5 64969 P82675 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS7 mitochondrial ribosomal protein S7 51081 Q9Y2R9 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRPS9 mitochondrial ribosomal protein S9 64965 P82933 IP; MS; COMPASS
Bennett EJ , et al. 2010
MRTO4 mRNA turnover 4 homolog (S. cerevisiae) 51154 Q9UKD2 IP; MS; COMPASS
Bennett EJ , et al. 2010
MSH6 mutS homolog 6 (E. coli) 2956 P52701 IP; MS; COMPASS
Bennett EJ , et al. 2010
MSI2 musashi RNA-binding protein 2 124540 Q96DH6 IP; MS; COMPASS
Bennett EJ , et al. 2010
MTA2 metastasis associated 1 family, member 2 9219 O94776 IP; MS; COMPASS
Bennett EJ , et al. 2010
MTDH metadherin 92140 Q86UE4 IP; MS; COMPASS
Bennett EJ , et al. 2010
MTFR2 mitochondrial fission regulator 2 71804 Q8VED8 IP; MS; COMPASS
Bennett EJ , et al. 2010
MTHFD1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 4522 G3V2B8 IP; MS; COMPASS
Bennett EJ , et al. 2010
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 25902 B7ZM99 IP; MS; COMPASS
Bennett EJ , et al. 2010
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 10797 P13995 IP; MS; COMPASS
Bennett EJ , et al. 2010
MTMR3 myotubularin related protein 3 8897 Q13615 IP; MS; COMPASS
Bennett EJ , et al. 2010
MTMR9 myotubularin related protein 9 66036 Q96QG7 IP; MS; COMPASS
Bennett EJ , et al. 2010
MYBBP1A MYB binding protein (P160) 1a 10514 Q9BQG0 IP; MS; COMPASS
Bennett EJ , et al. 2010
MYEOV2 myeloma overexpressed 2 150678 Q8WXC6 IP; MS; COMPASS
Bennett EJ , et al. 2010
N4BP1 NEDD4 binding protein 1 9683 O75113 IP; MS; COMPASS
Bennett EJ , et al. 2010
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 254827 Q58DX5 IP; MS; COMPASS
Bennett EJ , et al. 2010
NACA nascent polypeptide-associated complex alpha subunit 4666 E9PAV3 IP; MS; COMPASS
Bennett EJ , et al. 2010
NAP1L1 nucleosome assembly protein 1-like 1 4673 P55209 IP; MS; COMPASS
Bennett EJ , et al. 2010
NAP1L4 nucleosome assembly protein 1-like 4 4676 Q99733 IP; MS; COMPASS
Bennett EJ , et al. 2010
NAT10 N-acetyltransferase 10 (GCN5-related) 55226 B4DFD5 IP; MS; COMPASS
Bennett EJ , et al. 2010
NCAPG non-SMC condensin I complex, subunit G 64151 Q9BPX3 IP; MS; COMPASS
Bennett EJ , et al. 2010
NCBP1 nuclear cap binding protein subunit 1, 80kDa 4686 Q09161 IP; MS; COMPASS
Bennett EJ , et al. 2010
NCL nucleolin 4691 B3KM80 IP; MS; COMPASS
Bennett EJ , et al. 2010
NDUFA4 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa 4697 O00483 IP; MS; COMPASS
Bennett EJ , et al. 2010
NDUFA4P1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa, pseudogene 1 360165 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa 4698 Q16718 IP; MS; COMPASS
Bennett EJ , et al. 2010
NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) 4719 P28331 IP; MS; COMPASS
Bennett EJ , et al. 2010
NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase) 4720 O75306 IP; MS; COMPASS
Bennett EJ , et al. 2010
NDUFS3 NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) 4722 O75489 IP; MS; COMPASS
Bennett EJ , et al. 2010
NDUFS3 NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) 4722 O75489 IP; LC-MS/MS
Li J , et al. 2016
NEDD8 neural precursor cell expressed, developmentally down-regulated 8 4738 Q15843 IP/WB
Singer JD , et al. 1999
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 4790 P19838 IP; MS; COMPASS
Bennett EJ , et al. 2010
NISCH nischarin 11188 Q9Y2I1 IP; MS; COMPASS
Bennett EJ , et al. 2010
NKRF NFKB repressing factor 55922 G3V1N1 IP; MS; COMPASS
Bennett EJ , et al. 2010
NLE1 notchless homolog 1 (Drosophila) 54475 Q9NVX2 IP; MS; COMPASS
Bennett EJ , et al. 2010
NONO non-POU domain containing, octamer-binding 4841 Q15233 IP; MS; COMPASS
Bennett EJ , et al. 2010
NOP2 NOP2 nucleolar protein 4839 P46087 IP; MS; COMPASS
Bennett EJ , et al. 2010
NOP56 NOP56 ribonucleoprotein 10528 O00567 IP; MS; COMPASS
Bennett EJ , et al. 2010
NOP58 NOP58 ribonucleoprotein 51602 Q9Y2X3 IP; LC-MS/MS
Li J , et al. 2016
NOSIP nitric oxide synthase interacting protein 51070 Q9Y314 IP; MS; COMPASS
Bennett EJ , et al. 2010
NPEPPS aminopeptidase puromycin sensitive 9520 P55786 IP; MS; COMPASS
Bennett EJ , et al. 2010
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 4869 P06748 IP; MS; COMPASS
Bennett EJ , et al. 2010
NSF N-ethylmaleimide-sensitive factor 4905 P46459 IP; MS; COMPASS
Bennett EJ , et al. 2010
NSFL1C NSFL1 (p97) cofactor (p47) 55968 Q53FE8 IP/WB
Alexandru G , et al. 2008
NSUN2 NOP2/Sun RNA methyltransferase family, member 2 54888 Q08J23 IP; MS; COMPASS
Bennett EJ , et al. 2010
NT5DC2 5'-nucleotidase domain containing 2 64943 E9PAL9 IP; MS; COMPASS
Bennett EJ , et al. 2010
NTPCR nucleoside-triphosphatase, cancer-related 84284 Q5TDE9 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUDCD3 NudC domain containing 3 23386 Q8IVD9 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUDCD3 NudC domain containing 3 23386 Q8IVD9 IP; LC-MS/MS
Huttlin EL , et al. 2015
NUDT16L1 nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 84309 B2RD96 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 11051 O43809 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUP107 nucleoporin 107kDa 57122 P57740 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUP153 nucleoporin 153kDa 9972 P49790 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUP155 nucleoporin 155kDa 9631 O75694 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUP160 nucleoporin 160kDa 23279 Q12769 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUP205 nucleoporin 205kDa 23165 Q92621 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUP214 nucleoporin 214kDa 8021 P35658 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUP50 nucleoporin 50kDa 10762 Q9UKX7 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUP62 nucleoporin 62kDa 23636 P37198 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUP88 nucleoporin 88kDa 4927 Q99567 IP; MS; COMPASS
Bennett EJ , et al. 2010
NUP93 nucleoporin 93kDa 9688 Q8N1F7 IP; MS; COMPASS
Bennett EJ , et al. 2010
NVL nuclear VCP-like 4931 B4DF43 IP; MS; COMPASS
Bennett EJ , et al. 2010
NXF1 nuclear RNA export factor 1 10482 Q9UBU9 IP; MS; COMPASS
Bennett EJ , et al. 2010
NYAP1 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1 222950 Q6ZVC0 IP; MS; COMPASS
Bennett EJ , et al. 2010
OFCC1 orofacial cleft 1 candidate 1 266553 Q8IZS5 IP; MS; COMPASS
Bennett EJ , et al. 2010
OLIG2 oligodendrocyte lineage transcription factor 2 10215 Q13516 Y2H
Wang J , et al. 2011
OPA1 optic atrophy 1 (autosomal dominant) 4976 O60313 IP; MS; COMPASS
Bennett EJ , et al. 2010
OR2T35 olfactory receptor, family 2, subfamily T, member 35 403244 Q8NGX2 IP; MS; COMPASS
Bennett EJ , et al. 2010
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 5033 P13674 IP; MS; COMPASS
Bennett EJ , et al. 2010
P4HB prolyl 4-hydroxylase, beta polypeptide 5034 P07237 IP; MS; COMPASS
Bennett EJ , et al. 2010
PABPC1 poly(A) binding protein, cytoplasmic 1 26986 P11940 IP; MS; COMPASS
Bennett EJ , et al. 2010
PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) 8761 Q13310 IP; MS; COMPASS
Bennett EJ , et al. 2010
PABPN1 poly(A) binding protein, nuclear 1 8106 Q86U42 IP; MS; COMPASS
Bennett EJ , et al. 2010
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase 10606 P22234 IP; MS; COMPASS
Bennett EJ , et al. 2010
PAIP1 poly(A) binding protein interacting protein 1 10605 Q9H074 IP; MS; COMPASS
Bennett EJ , et al. 2010
PARK7 Parkinson disease (autosomal recessive, early onset) 7 11315 Q99497 IP/WB
Bitar MS , et al. 2012
PBDC1 polysaccharide biosynthesis domain containing 1 51260 Q9BVG4 IP; MS; COMPASS
Bennett EJ , et al. 2010
PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha 5092 P61457 IP; MS; COMPASS
Bennett EJ , et al. 2010
PCBP2 poly(rC) binding protein 2 5094 Q15366 IP; MS; COMPASS
Bennett EJ , et al. 2010
PCDHA6 protocadherin alpha 6 56142 Q9UN73 IP; MS; COMPASS
Bennett EJ , et al. 2010
PCID2 PCI domain containing 2 55795 Q5JVF3 IP; MS; COMPASS
Bennett EJ , et al. 2010
PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 5110 H7BY58 IP; MS; COMPASS
Bennett EJ , et al. 2010
PCNA proliferating cell nuclear antigen 5111 P12004 IP; MS; COMPASS
Bennett EJ , et al. 2010
PDCD11 programmed cell death 11 22984 Q14690 IP; MS; COMPASS
Bennett EJ , et al. 2010
PDCD6IP programmed cell death 6 interacting protein 10015 Q8WUM4 IP; MS; COMPASS
Bennett EJ , et al. 2010
PDE12 phosphodiesterase 12 201626 Q6L8Q7 IP; MS; COMPASS
Bennett EJ , et al. 2010
PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1 5160 P08559 IP; MS; COMPASS
Bennett EJ , et al. 2010
PDHA2 pyruvate dehydrogenase (lipoamide) alpha 2 5161 P29803 IP; MS; COMPASS
Bennett EJ , et al. 2010
PDHB pyruvate dehydrogenase (lipoamide) beta 5162 P11177 IP; MS; COMPASS
Bennett EJ , et al. 2010
PDIA6 protein disulfide isomerase family A, member 6 10130 Q15084 IP; MS; COMPASS
Bennett EJ , et al. 2010
PDIA6 protein disulfide isomerase family A, member 6 10130 Q15084 IP; LC-MS/MS
Li J , et al. 2016
PDPR pyruvate dehydrogenase phosphatase regulatory subunit 55066 Q8NCN5 IP; MS; COMPASS
Bennett EJ , et al. 2010
PDXK pyridoxal (pyridoxine, vitamin B6) kinase 8566 O00764 IP; MS; COMPASS
Bennett EJ , et al. 2010
PEF1 penta-EF-hand domain containing 1 553115 Q9UBV8 IP; MS; COMPASS
Bennett EJ , et al. 2010
PELO pelota homolog (Drosophila) 53918 Q9BRX2 IP; MS; COMPASS
Bennett EJ , et al. 2010
PES1 pescadillo ribosomal biogenesis factor 1 23481 O00541 IP; MS; COMPASS
Bennett EJ , et al. 2010
PFKM phosphofructokinase, muscle 5213 P08237 IP; MS; COMPASS
Bennett EJ , et al. 2010
PFKP phosphofructokinase, platelet 5214 B3KS15 IP; MS; COMPASS
Bennett EJ , et al. 2010
PFN1 profilin 1 5216 P07737 IP; MS; COMPASS
Bennett EJ , et al. 2010
PGAM5 phosphoglycerate mutase family member 5 192111 Q96HS1 IP; MS; COMPASS
Bennett EJ , et al. 2010
PGM3 phosphoglucomutase 3 5238 B4DX94 IP; MS; COMPASS
Bennett EJ , et al. 2010
PGRMC1 progesterone receptor membrane component 1 10857 O00264 IP; MS; COMPASS
Bennett EJ , et al. 2010
PHAX phosphorylated adaptor for RNA export 51808 Q9H814 IP; MS; COMPASS
Bennett EJ , et al. 2010
PHB prohibitin 5245 P35232 IP; MS; COMPASS
Bennett EJ , et al. 2010
PHF12 PHD finger protein 12 57649 Q96QT6 ChIP
Mathew R , et al. 2012
PHF6 PHD finger protein 6 84295 Q8IWS0 IP; MS; COMPASS
Bennett EJ , et al. 2010
PHGDH phosphoglycerate dehydrogenase 26227 O43175 IP; MS; COMPASS
Bennett EJ , et al. 2010
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 5295 P27986 IP; MS; COMPASS
Bennett EJ , et al. 2010
PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 5296 O00459 IP; MS; COMPASS
Bennett EJ , et al. 2010
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 9867 O43164 IP; MS; COMPASS
Bennett EJ , et al. 2010
PKM pyruvate kinase, muscle 5315 P14618 IP; MS; COMPASS
Bennett EJ , et al. 2010
PKP2 plakophilin 2 5318 Q99959 IP; MS; COMPASS
Bennett EJ , et al. 2010
PLD2 phospholipase D2 5338 I3L2C9 IP; MS; COMPASS
Bennett EJ , et al. 2010
PLEC plectin 5339 Q15149 IP; MS; COMPASS
Bennett EJ , et al. 2010
PLK1 polo-like kinase 1 5347 P53350 IP/WB; in vitro ubiquitination assay
Beck J , et al. 2013
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 5351 Q02809 IP; MS; COMPASS
Bennett EJ , et al. 2010
PLOD3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 8985 O60568 IP; MS; COMPASS
Bennett EJ , et al. 2010
PLRG1 pleiotropic regulator 1 5356 O43660 IP; MS; COMPASS
Bennett EJ , et al. 2010
PLRG1 pleiotropic regulator 1 5356 O43660 IP; LC-MS/MS
Li J , et al. 2016
PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) 5378 P54277 IP/WB
Cannavo E , et al. 2006
POLD1 polymerase (DNA directed), delta 1, catalytic subunit 5424 P28340 IP; MS; COMPASS
Bennett EJ , et al. 2010
POLDIP2 polymerase (DNA-directed), delta interacting protein 2 26073 Q9Y2S7 IP; MS; COMPASS
Bennett EJ , et al. 2010
POLR1C polymerase (RNA) I polypeptide C, 30kDa 9533 O15160 IP; MS; COMPASS
Bennett EJ , et al. 2010
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 5431 P30876 IP; MS; COMPASS
Bennett EJ , et al. 2010
POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa 5432 P19387 IP; MS; COMPASS
Bennett EJ , et al. 2010
POLR2E polymerase (RNA) II (DNA directed) polypeptide E, 25kDa 5434 P19388 IP; MS; COMPASS
Bennett EJ , et al. 2010
POLRMT polymerase (RNA) mitochondrial (DNA directed) 5442 O00411 IP; MS; COMPASS
Bennett EJ , et al. 2010
PON2 paraoxonase 2 5445 Q15165 IP; MS; COMPASS
Bennett EJ , et al. 2010
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) 10940 Q99575 IP; MS; COMPASS
Bennett EJ , et al. 2010
PPIA peptidylprolyl isomerase A (cyclophilin A) 5478 P62937 IP; MS; COMPASS
Bennett EJ , et al. 2010
PPIG peptidylprolyl isomerase G (cyclophilin G) 9360 Q13427 IP; MS; COMPASS
Bennett EJ , et al. 2010
PPIG peptidylprolyl isomerase G (cyclophilin G) 9360 Q13427 IP; LC-MS/MS
Li J , et al. 2016
PPIH peptidylprolyl isomerase H (cyclophilin H) 10465 O43447 IP; MS; COMPASS
Bennett EJ , et al. 2010
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme 5499 P62136 IP; MS; COMPASS
Bennett EJ , et al. 2010
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 5500 P62140 IP; MS; COMPASS
Bennett EJ , et al. 2010
PPP1R15A protein phosphatase 1, regulatory subunit 15A 23645 O75807 IP; MS; COMPASS
Bennett EJ , et al. 2010
PPP2CA protein phosphatase 2, catalytic subunit, alpha isoenzyme 5515 P67775 IP; MS; COMPASS
Bennett EJ , et al. 2010
PPP2R1A protein phosphatase 2, regulatory subunit A, alpha 5518 A8K7B7 IP; MS; COMPASS
Bennett EJ , et al. 2010
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 5520 P63151 IP; MS; COMPASS
Bennett EJ , et al. 2010
PPP2R2B protein phosphatase 2, regulatory subunit B, beta 5521 Q00005 IP; MS; IP/WB; in vitro ubiquitination assay
Oberg EA , et al. 2012
PPP4C protein phosphatase 4, catalytic subunit 5531 P60510 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRDX1 peroxiredoxin 1 5052 Q06830 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRDX3 peroxiredoxin 3 10935 P30048 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRDX4 peroxiredoxin 4 10549 Q13162 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRKACA protein kinase, cAMP-dependent, catalytic, alpha 5566 P17612 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 5573 P10644 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRKAR1B protein kinase, cAMP-dependent, regulatory, type I, beta 5575 P31321 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRKDC protein kinase, DNA-activated, catalytic polypeptide 5591 P78527 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRKDC protein kinase, DNA-activated, catalytic polypeptide 5591 P78527 IP; LC-MS/MS
Li J , et al. 2016
PRMT1 protein arginine methyltransferase 1 3276 B4E3C3 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRMT5 protein arginine methyltransferase 5 10419 O14744 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRPF19 PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) 27339 Q9UMS4 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRPF31 PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae) 26121 F1T0A5 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRPF39 PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae) 55015 Q86UA1 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRPF4 PRP4 pre-mRNA processing factor 4 homolog (yeast) 9128 O43172 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 55660 O75400 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRPF8 PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae) 10594 Q6P2Q9 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRPH peripherin 5630 B3KWQ6 IP; MS; COMPASS
Bennett EJ , et al. 2010
PRRC2A proline-rich coiled-coil 2A 7916 P48634 IP; MS; COMPASS
Bennett EJ , et al. 2010
PSMA5 proteasome (prosome, macropain) subunit, alpha type, 5 5686 B4E2V4 IP; MS; COMPASS
Bennett EJ , et al. 2010
PSMC1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 5700 P62191 IP; MS; COMPASS
Bennett EJ , et al. 2010
PSMC1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 5700 P62191 IP; LC-MS/MS
Li J , et al. 2016
PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2 5701 B7Z571 IP; MS; COMPASS
Bennett EJ , et al. 2010
PSMC4 proteasome (prosome, macropain) 26S subunit, ATPase, 4 5704 A8K2M0 IP; MS; COMPASS
Bennett EJ , et al. 2010
PSMC5 proteasome (prosome, macropain) 26S subunit, ATPase, 5 5705 P62195 IP; MS; COMPASS
Bennett EJ , et al. 2010
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 5707 Q99460 IP; MS; COMPASS
Bennett EJ , et al. 2010
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 5708 Q13200 IP; MS; COMPASS
Bennett EJ , et al. 2010
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 5709 O43242 IP; LC-MS/MS
Li J , et al. 2016
PSPC1 paraspeckle component 1 55269 B4DWI8 IP; MS; COMPASS
Bennett EJ , et al. 2010
PTBP1 polypyrimidine tract binding protein 1 5725 P26599 IP; MS; COMPASS
Bennett EJ , et al. 2010
PTCD3 pentatricopeptide repeat domain 3 55037 Q96EY7 IP; MS; COMPASS
Bennett EJ , et al. 2010
PTPLAD1 protein tyrosine phosphatase-like A domain containing 1 51495 Q9P035 IP; MS; COMPASS
Bennett EJ , et al. 2010
PTPRT protein tyrosine phosphatase, receptor type, T 11122 O14522 IP; MS; COMPASS
Bennett EJ , et al. 2010
PUF60 poly-U binding splicing factor 60KDa 22827 Q9UHX1 IP; MS; COMPASS
Bennett EJ , et al. 2010
PURA purine-rich element binding protein A 5813 Q00577 IP; MS; COMPASS
Bennett EJ , et al. 2010
PURB purine-rich element binding protein B 5814 Q96QR8 IP; MS; COMPASS
Bennett EJ , et al. 2010
PWP1 PWP1 homolog (S. cerevisiae) 11137 Q13610 IP; MS; COMPASS
Bennett EJ , et al. 2010
PWP2 PWP2 periodic tryptophan protein homolog (yeast) 5822 Q15269 IP; MS; COMPASS
Bennett EJ , et al. 2010
PXDNL peroxidasin homolog (Drosophila)-like 137902 A1KZ92 IP; MS; COMPASS
Bennett EJ , et al. 2010
PYCR1 pyrroline-5-carboxylate reductase 1 5831 P32322 IP; MS; COMPASS
Bennett EJ , et al. 2010
PYCR2 pyrroline-5-carboxylate reductase family, member 2 29920 Q96C36 IP; MS; COMPASS
Bennett EJ , et al. 2010
PYCRL pyrroline-5-carboxylate reductase-like 65263 Q53H96 IP; MS; COMPASS
Bennett EJ , et al. 2010
QARS glutaminyl-tRNA synthetase 5859 P47897 IP; MS; COMPASS
Bennett EJ , et al. 2010
QDPR quinoid dihydropteridine reductase 5860 P09417 IP; MS; COMPASS
Bennett EJ , et al. 2010
QPCT glutaminyl-peptide cyclotransferase 25797 Q16769 IP; MS; COMPASS
Bennett EJ , et al. 2010
RAB1B RAB1B, member RAS oncogene family 81876 Q9H0U4 IP; LC-MS/MS
Li J , et al. 2016
RAE1 RAE1 RNA export 1 homolog (S. pombe) 8480 P78406 IP; MS; COMPASS
Bennett EJ , et al. 2010
RARS arginyl-tRNA synthetase 5917 P54136 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 23543 O43251 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBM10 RNA binding motif protein 10 8241 P98175 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBM14 RNA binding motif protein 14 10432 Q96PK6 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBM17 RNA binding motif protein 17 84991 Q96I25 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBM22 RNA binding motif protein 22 55696 Q9NW64 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBM28 RNA binding motif protein 28 55131 B4DU52 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBM3 RNA binding motif (RNP1, RRM) protein 3 5935 P98179 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBM39 RNA binding motif protein 39 9584 Q14498 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBM4 RNA binding motif protein 4 5936 Q9BWF3 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBM45 RNA binding motif protein 45 129831 Q8IUH3 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBM4B RNA binding motif protein 4B 83759 Q9BQ04 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBM7 RNA binding motif protein 7 10179 Q9Y580 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBMS2 RNA binding motif, single stranded interacting protein 2 5939 Q15434 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBMX RNA binding motif protein, X-linked 27316 P38159 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBMXL2 RNA binding motif protein, X-linked-like 2 27288 O75526 IP; MS; COMPASS
Bennett EJ , et al. 2010
RBPJ recombination signal binding protein for immunoglobulin kappa J region 3516 Q06330 IP; MS
Ohnuki H , et al. 2012
Rbx1 ring-box 1 56438 P62878 IP/WB
Kamura T , et al. 2001
RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 55213 B3KR20 IP; MS; COMPASS
Bennett EJ , et al. 2010
RCBTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 1102 O95199 GST
Plafker KS , et al. 2009
RCN1 reticulocalbin 1, EF-hand calcium binding domain 5954 Q15293 IP; MS; COMPASS
Bennett EJ , et al. 2010
RCN2 reticulocalbin 2, EF-hand calcium binding domain 5955 F8WCY5 IP; MS; COMPASS
Bennett EJ , et al. 2010
RFC2 replication factor C (activator 1) 2, 40kDa 5982 P35250 IP; MS; COMPASS
Bennett EJ , et al. 2010
RFC5 replication factor C (activator 1) 5, 36.5kDa 5985 F8W9B4 IP; MS; COMPASS
Bennett EJ , et al. 2010
RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 83695 Q9BSD3 IP; MS; COMPASS
Bennett EJ , et al. 2010
RHOA ras homolog gene family, member A 387 P61586 Y2H; IP/WB
Chen Y , et al. 2009
RHOBTB1 Rho-related BTB domain containing 1 9886 O94844 IP; MS; COMPASS
Bennett EJ , et al. 2010
RHOBTB2 Rho-related BTB domain containing 2 23221 A8K9Z8 IP; MS; COMPASS
Bennett EJ , et al. 2010
RHOBTB3 Rho-related BTB domain containing 3 22836 O94955 IP; MS; COMPASS
Bennett EJ , et al. 2010
RHOBTB3 Rho-related BTB domain containing 3 22836 O94955 IP; LC-MS/MS
Huttlin EL , et al. 2015
RNF219 ring finger protein 219 79596 Q5W0B1 IP; MS; COMPASS
Bennett EJ , et al. 2010
Rnf7 ring finger protein 7 19823 Q9WTZ1 IP/WB
Yasukawa T , et al. 2008
RNMT RNA (guanine-7-) methyltransferase 8731 O43148 IP; MS; COMPASS
Bennett EJ , et al. 2010
RNPS1 RNA binding protein S1, serine-rich domain 10921 D3DU92 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPA2 replication protein A2, 32kDa 6118 P15927 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPA3 replication protein A3, 14kDa 6119 A4D105 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPAP3 RNA polymerase II associated protein 3 79657 Q9H6T3 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL10 ribosomal protein L10 6134 P27635 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL10A ribosomal protein L10a 4736 P62906 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL10P16 ribosomal protein L10 pseudogene 16 284393 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL11 ribosomal protein L11 6135 P62913 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL12 ribosomal protein L12 6136 P30050 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL13 ribosomal protein L13 6137 A8K4C8 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL13A ribosomal protein L13a 23521 P40429 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL13P12 ribosomal protein L13 pseudogene 12 388344 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL14 ribosomal protein L14 9045 P50914 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL15 ribosomal protein L15 6138 P61313 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL17 ribosomal protein L17 6139 P18621 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL18 ribosomal protein L18 6141 Q07020 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL19 ribosomal protein L19 6143 P84098 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL21 ribosomal protein L21 6144 P46778 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL21P16 ribosomal protein L21 pseudogene 16 729402 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL21P19 ribosomal protein L21 pseudogene 19 641293 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL22 ribosomal protein L22 6146 P35268 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL23 ribosomal protein L23 9349 P62829 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL23A ribosomal protein L23a 6147 P62750 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL24 ribosomal protein L24 6152 P83731 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL26L1 ribosomal protein L26-like 1 51121 Q9UNX3 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL27 ribosomal protein L27 6155 P61353 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL3 ribosomal protein L3 6122 P39023 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL30 ribosomal protein L30 6156 P62888 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL31 ribosomal protein L31 6160 P62899 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL35 ribosomal protein L35 11224 P42766 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL35A ribosomal protein L35a 6165 P18077 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL36 ribosomal protein L36 25873 Q9Y3U8 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL36AP37 ribosomal protein L36a pseudogene 37 729362 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL37A ribosomal protein L37a 6168 P61513 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL38 ribosomal protein L38 6169 P63173 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL4 ribosomal protein L4 6124 P36578 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL5 ribosomal protein L5 6125 A2RUM7 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL6 ribosomal protein L6 6128 Q02878 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL7 ribosomal protein L7 6129 P18124 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL7A ribosomal protein L7a 6130 P62424 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL7AP27 ribosomal protein L7a pseudogene 27 152663 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL7L1 ribosomal protein L7-like 1 285855 Q6DKI1 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL8 ribosomal protein L8 6132 P62917 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPL9 ribosomal protein L9 6133 P32969 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPLP0 ribosomal protein, large, P0 6175 P05388 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPLP1 ribosomal protein, large, P1 6176 P05386 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPLP2 ribosomal protein, large, P2 6181 P05387 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPN1 ribophorin I 6184 P04843 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPN2 ribophorin II 6185 P04844 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPP25L ribonuclease P/MRP 25kDa subunit-like 138716 Q8N5L8 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPP30 ribonuclease P/MRP 30kDa subunit 10556 P78346 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS10 ribosomal protein S10 6204 P46783 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS11 ribosomal protein S11 6205 P62280 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS12 ribosomal protein S12 6206 P25398 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS13 ribosomal protein S13 6207 P62277 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS14 ribosomal protein S14 6208 P62263 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS15 ribosomal protein S15 6209 P62841 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS15A ribosomal protein S15a 6210 B2R4W8 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS16 ribosomal protein S16 6217 P62249 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS17 ribosomal protein S17 6218 P08708 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS18 ribosomal protein S18 6222 P62269 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS19 ribosomal protein S19 6223 B0ZBD0 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS2 ribosomal protein S2 6187 P15880 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS20 ribosomal protein S20 6224 P60866 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS21 ribosomal protein S21 6227 P63220 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS24 ribosomal protein S24 6229 P62847 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS25 ribosomal protein S25 6230 P62851 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS26P54 ribosomal protein S26 pseudogene 54 100131971 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS27 ribosomal protein S27 6232 P42677 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS27A ribosomal protein S27a 6233 P62979 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS28 ribosomal protein S28 6234 B2R4R9 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS3 ribosomal protein S3 6188 P23396 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS3A ribosomal protein S3A 6189 P61247 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS4X ribosomal protein S4, X-linked 6191 B2R491 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS5 ribosomal protein S5 6193 P46782 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS6 ribosomal protein S6 6194 A2A3R6 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS7 ribosomal protein S7 6201 P62081 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS7P4 ribosomal protein S7 pseudogene 4 149224 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS8 ribosomal protein S8 6202 P62241 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPS9 ribosomal protein S9 6203 P46781 IP; MS; COMPASS
Bennett EJ , et al. 2010
RPSAP12 ribosomal protein SA pseudogene 12 387867 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
RPSAP15 ribosomal protein SA pseudogene 15 220885 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
RPSAP55 ribosomal protein SA pseudogene 55 388122 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
RRBP1 ribosome binding protein 1 6238 Q9P2E9 IP; MS; COMPASS
Bennett EJ , et al. 2010
RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) 23223 B3KMR5 IP; MS; COMPASS
Bennett EJ , et al. 2010
RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae) 51018 Q9Y3B9 IP; MS; COMPASS
Bennett EJ , et al. 2010
RRP1B ribosomal RNA processing 1 homolog B (S. cerevisiae) 23076 Q14684 IP; MS; COMPASS
Bennett EJ , et al. 2010
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 23212 Q15050 IP; MS; COMPASS
Bennett EJ , et al. 2010
RSL1D1 ribosomal L1 domain containing 1 26156 O76021 IP; MS; COMPASS
Bennett EJ , et al. 2010
RTEL1 regulator of telomere elongation helicase 1 51750 Q9NZ71 IP; MS; COMPASS
Bennett EJ , et al. 2010
RUVBL1 RuvB-like 1 (E. coli) 8607 Q9Y265 IP; MS; COMPASS
Bennett EJ , et al. 2010
RUVBL2 RuvB-like 2 (E. coli) 10856 Q9Y230 IP; MS; COMPASS
Bennett EJ , et al. 2010
SAFB scaffold attachment factor B 6294 Q15424 IP; MS; COMPASS
Bennett EJ , et al. 2010
SAFB2 scaffold attachment factor B2 9667 Q14151 IP; MS; COMPASS
Bennett EJ , et al. 2010
SAMHD1 SAM domain and HD domain 1 25939 Q59H15 IP; MS; COMPASS
Bennett EJ , et al. 2010
SARS2 seryl-tRNA synthetase 2, mitochondrial 54938 Q9NP81 IP; MS; COMPASS
Bennett EJ , et al. 2010
SART1 squamous cell carcinoma antigen recognized by T cells 9092 O43290 IP; MS; COMPASS
Bennett EJ , et al. 2010
SART3 squamous cell carcinoma antigen recognized by T cells 3 9733 Q15020 IP; MS; COMPASS
Bennett EJ , et al. 2010
SAV1 salvador homolog 1 (Drosophila) 60485 Q9H4B6 IP; MS; COMPASS
Bennett EJ , et al. 2010
SCO2 SCO cytochrome oxidase deficient homolog 2 (yeast) 9997 O43819 IP; MS; COMPASS
Bennett EJ , et al. 2010
SDF2L1 stromal cell-derived factor 2-like 1 23753 Q9HCN8 IP; MS; COMPASS
Bennett EJ , et al. 2010
SDF4 stromal cell derived factor 4 51150 Q9BRK5 IP; MS; COMPASS
Bennett EJ , et al. 2010
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 6389 P31040 IP; MS; COMPASS
Bennett EJ , et al. 2010
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip) 6390 P21912 IP; MS; COMPASS
Bennett EJ , et al. 2010
SEC13 SEC13 homolog (S. cerevisiae) 6396 A8MV37 IP; MS; COMPASS
Bennett EJ , et al. 2010
SEC16A SEC16 homolog A (S. cerevisiae) 9919 O15027 IP; MS; COMPASS
Bennett EJ , et al. 2010
SEC23A Sec23 homolog A (S. cerevisiae) 10484 B3KXI2 IP; MS; COMPASS
Bennett EJ , et al. 2010
SEC23B Sec23 homolog B (S. cerevisiae) 10483 Q15437 IP; MS; COMPASS
Bennett EJ , et al. 2010
SEC24A SEC24 family, member A (S. cerevisiae) 10802 B4E205 IP; MS; COMPASS
Bennett EJ , et al. 2010
SEC24B SEC24 family, member B (S. cerevisiae) 10427 O95487 IP; MS; COMPASS
Bennett EJ , et al. 2010
SEC24C SEC24 family, member C (S. cerevisiae) 9632 P53992 IP; MS; COMPASS
Bennett EJ , et al. 2010
SEC31A SEC31 homolog A (S. cerevisiae) 22872 O94979 IP; MS; COMPASS
Bennett EJ , et al. 2010
SEPHS1 selenophosphate synthetase 1 22929 B4DWK0 IP; MS; COMPASS
Bennett EJ , et al. 2010
SERBP1 SERPINE1 mRNA binding protein 1 26135 Q8NC51 IP; MS; COMPASS
Bennett EJ , et al. 2010
SF1 splicing factor 1 7536 Q15637 IP; MS; COMPASS
Bennett EJ , et al. 2010
SF3A1 splicing factor 3a, subunit 1, 120kDa 10291 E9PAW1 IP; MS; COMPASS
Bennett EJ , et al. 2010
SF3A2 splicing factor 3a, subunit 2, 66kDa 8175 Q05DF2 IP; MS; COMPASS
Bennett EJ , et al. 2010
SF3B1 splicing factor 3b, subunit 1, 155kDa 23451 A0JLT9 IP; MS; COMPASS
Bennett EJ , et al. 2010
SF3B2 splicing factor 3b, subunit 2, 145kDa 10992 Q13435 IP; MS; COMPASS
Bennett EJ , et al. 2010
SF3B3 splicing factor 3b, subunit 3, 130kDa 23450 A8K6V3 IP; MS; COMPASS
Bennett EJ , et al. 2010
SF3B4 splicing factor 3b, subunit 4, 49kDa 10262 B3KUJ0 IP; MS; COMPASS
Bennett EJ , et al. 2010
SHKBP1 SH3KBP1 binding protein 1 92799 Q8TBC3 IP; MS; COMPASS
Bennett EJ , et al. 2010
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial) 6472 P34897 IP; MS; COMPASS
Bennett EJ , et al. 2010
SKIV2L2 superkiller viralicidic activity 2-like 2 (S. cerevisiae) 23517 P42285 IP; MS; COMPASS
Bennett EJ , et al. 2010
SKP1 S-phase kinase-associated protein 1 6500 P63208 IP; MS; COMPASS
Bennett EJ , et al. 2010
SLC16A1 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) 6566 P53985 IP; MS; COMPASS
Bennett EJ , et al. 2010
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 6507 P43003 IP; MS; COMPASS
Bennett EJ , et al. 2010
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 6510 B4DWS4 IP; MS; COMPASS
Bennett EJ , et al. 2010
SLC25A22 solute carrier family 25 (mitochondrial carrier: glutamate), member 22 79751 Q9H936 IP; MS; COMPASS
Bennett EJ , et al. 2010
SLC25A23 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 79085 Q9BV35 IP; MS; COMPASS
Bennett EJ , et al. 2010
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 5250 Q00325 IP; MS; COMPASS
Bennett EJ , et al. 2010
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 292 P05141 IP; MS; COMPASS
Bennett EJ , et al. 2010
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 293 P12236 IP; MS; COMPASS
Bennett EJ , et al. 2010
SLC3A2 solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 6520 J3KPF3 IP; MS; COMPASS
Bennett EJ , et al. 2010
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 6597 A7E2E1 IP; MS; COMPASS
Bennett EJ , et al. 2010
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 6598 Q12824 IP; MS; COMPASS
Bennett EJ , et al. 2010
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 6599 Q58EY4 IP; MS; COMPASS
Bennett EJ , et al. 2010
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 6601 Q8TAQ2 IP; MS; COMPASS
Bennett EJ , et al. 2010
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 6603 Q92925 IP; MS; COMPASS
Bennett EJ , et al. 2010
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 6605 Q969G3 IP; MS; COMPASS
Bennett EJ , et al. 2010
SMC1A structural maintenance of chromosomes 1A 8243 Q14683 IP; MS; COMPASS
Bennett EJ , et al. 2010
SMC3 structural maintenance of chromosomes 3 9126 Q9UQE7 IP; MS; COMPASS
Bennett EJ , et al. 2010
SMN1 survival of motor neuron 1, telomeric 6606 Q16637 IP; MS; COMPASS
Bennett EJ , et al. 2010
SMN2 survival of motor neuron 2, centromeric 6607 Q16637 IP; MS; COMPASS
Bennett EJ , et al. 2010
SMNDC1 survival motor neuron domain containing 1 10285 O75940 IP; MS; COMPASS
Bennett EJ , et al. 2010
SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) 55234 A0MNN4 IP; MS; COMPASS
Bennett EJ , et al. 2010
SND1 staphylococcal nuclease and tudor domain containing 1 27044 Q7KZF4 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 23020 O75643 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 6625 P08621 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRPA small nuclear ribonucleoprotein polypeptide A 6626 P09012 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRPA1 small nuclear ribonucleoprotein polypeptide A' 6627 P09661 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRPB small nuclear ribonucleoprotein polypeptides B and B1 6628 P14678 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRPB2 small nuclear ribonucleoprotein polypeptide B 6629 P08579 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRPC small nuclear ribonucleoprotein polypeptide C 6631 P09234 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa 6632 P62314 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRPD2 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa 6633 P62316 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa 6634 P62318 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRPE small nuclear ribonucleoprotein polypeptide E 6635 P62304 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRPF small nuclear ribonucleoprotein polypeptide F 6636 P62306 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNRPG small nuclear ribonucleoprotein polypeptide G 6637 P62308 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNW1 SNW domain containing 1 22938 Q13573 IP; MS; COMPASS
Bennett EJ , et al. 2010
SNX9 sorting nexin 9 51429 Q9Y5X1 IP; MS; COMPASS
Bennett EJ , et al. 2010
SPATA5L1 spermatogenesis associated 5-like 1 79029 Q9BVQ7 IP; MS; COMPASS
Bennett EJ , et al. 2010
SPOP speckle-type POZ protein 8405 O43791 GST
Plafker KS , et al. 2009
SPTAN1 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) 6709 Q13813 IP; MS; COMPASS
Bennett EJ , et al. 2010
SPTBN1 spectrin, beta, non-erythrocytic 1 6711 Q01082 IP; MS; COMPASS
Bennett EJ , et al. 2010
SQSTM1 sequestosome 1 8878 Q13501 IP/WB
Lau A , et al. 2010
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 6727 P37108 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRP68 signal recognition particle 68kDa 6730 B3KWY7 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRP72 signal recognition particle 72kDa 6731 O76094 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRPK1 SRSF protein kinase 1 6732 B4DS61 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRPK2 SRSF protein kinase 2 6733 P78362 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRPRB signal recognition particle receptor, B subunit 58477 Q549N5 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRPX sushi-repeat containing protein, X-linked 8406 B3KWP8 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRRM1 serine/arginine repetitive matrix 1 10250 Q8IYB3 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRRM2 serine/arginine repetitive matrix 2 23524 Q9UQ35 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRRT serrate RNA effector molecule homolog (Arabidopsis) 51593 Q9BXP5 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRSF1 serine/arginine-rich splicing factor 1 6426 Q07955 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRSF11 serine/arginine-rich splicing factor 11 9295 Q05519 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRSF2 serine/arginine-rich splicing factor 2 6427 Q01130 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRSF3 serine/arginine-rich splicing factor 3 6428 B2R6F3 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRSF4 serine/arginine-rich splicing factor 4 6429 Q08170 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRSF5 serine/arginine-rich splicing factor 5 6430 Q13243 IP; MS; COMPASS
Bennett EJ , et al. 2010
SRSF9 serine/arginine-rich splicing factor 9 8683 Q13242 IP; MS; COMPASS
Bennett EJ , et al. 2010
SS18 synovial sarcoma translocation, chromosome 18 6760 Q15532 IP; MS; COMPASS
Bennett EJ , et al. 2010
SS18L1 synovial sarcoma translocation gene on chromosome 18-like 1 26039 O75177 IP; MS; COMPASS
Bennett EJ , et al. 2010
SSB Sjogren syndrome antigen B (autoantigen La) 6741 P05455 IP; MS; COMPASS
Bennett EJ , et al. 2010
SSBP1 single-stranded DNA binding protein 1, mitochondrial 6742 A4D1U3 IP; MS; COMPASS
Bennett EJ , et al. 2010
SSR1 signal sequence receptor, alpha 6745 P43307 IP; MS; COMPASS
Bennett EJ , et al. 2010
SSR4 signal sequence receptor, delta 6748 P51571 IP; MS; COMPASS
Bennett EJ , et al. 2010
STAU1 staufen 6780 O95753 IP; MS; COMPASS
Bennett EJ , et al. 2010
STRBP spermatid perinuclear RNA binding protein 55342 Q96SI9 IP; MS; COMPASS
Bennett EJ , et al. 2010
SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit 8801 Q3ZCW5 IP; MS; COMPASS
Bennett EJ , et al. 2010
SUMO2 SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae) 6613 P61956 IP; MS
Li T , et al. 2006
SUMO3 SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae) 6612 P55854 IP; MS
Li T , et al. 2006
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae) 11198 Q9Y5B9 IP; MS; COMPASS
Bennett EJ , et al. 2010
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 6829 O00267 IP; MS; COMPASS
Bennett EJ , et al. 2010
SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae) 6832 Q8IYB8 IP; MS; COMPASS
Bennett EJ , et al. 2010
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 10492 B7Z645 IP; MS; COMPASS
Bennett EJ , et al. 2010
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 8148 Q92804 IP; MS; COMPASS
Bennett EJ , et al. 2010
TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa 6877 Q15542 IP; MS; COMPASS
Bennett EJ , et al. 2010
TAF9B TATA-box binding protein associated factor 9b 51616 Q9HBM6 IP; LC-MS/MS
Li J , et al. 2016
TARBP2 TAR (HIV-1) RNA binding protein 2 6895 Q15633 IP; MS; COMPASS
Bennett EJ , et al. 2010
TARDBP TAR DNA binding protein 23435 Q13148 IP; MS; COMPASS
Bennett EJ , et al. 2010
TARS threonyl-tRNA synthetase 6897 P26639 IP; MS; COMPASS
Bennett EJ , et al. 2010
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative) 80222 Q9BW92 IP; MS; COMPASS
Bennett EJ , et al. 2010
TBCD tubulin folding cofactor D 6904 Q9BTW9 PCP; SILAC
Kristensen AR , et al. 2012
TBL2 transducin (beta)-like 2 26608 Q9Y4P3 IP; MS; COMPASS
Bennett EJ , et al. 2010
TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) 6921 Q15369 IP; MS; COMPASS
Bennett EJ , et al. 2010
TCEB2 transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) 6923 Q15370 IP; MS; COMPASS
Bennett EJ , et al. 2010
TCP1 t-complex 1 6950 P17987 IP; MS; COMPASS
Bennett EJ , et al. 2010
TECR trans-2,3-enoyl-CoA reductase 9524 Q9NZ01 IP; MS; COMPASS
Bennett EJ , et al. 2010
TEFM transcription elongation factor, mitochondrial 79736 Q96QE5 IP; MS; COMPASS
Bennett EJ , et al. 2010
TFAM transcription factor A, mitochondrial 7019 A8MRB2 IP; MS; COMPASS
Bennett EJ , et al. 2010
TFB2M transcription factor B2, mitochondrial 64216 Q9H5Q4 IP; MS; COMPASS
Bennett EJ , et al. 2010
TFG TRK-fused gene 10342 Q92734 IP; MS; COMPASS
Bennett EJ , et al. 2010
THADA thyroid adenoma associated 63892 Q6YHU6 IP; MS; COMPASS
Bennett EJ , et al. 2010
TIA1 TIA1 cytotoxic granule-associated RNA binding protein 7072 P31483 IP; MS; COMPASS
Bennett EJ , et al. 2010
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 7073 Q01085 IP; MS; COMPASS
Bennett EJ , et al. 2010
TIAM1 T-cell lymphoma invasion and metastasis 1 7074 Q13009 in vitro ubiquitination assay; in vitro binding assay; Immunofluorescence; IP/WB
In vivo ubiquitination assay
Genau HM , et al. 2015
TIMM13 translocase of inner mitochondrial membrane 13 homolog (yeast) 26517 Q9Y5L4 IP; MS; COMPASS
Bennett EJ , et al. 2010
TIMM50 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) 92609 Q3ZCQ8 IP; MS; COMPASS
Bennett EJ , et al. 2010
TIPRL TIP41, TOR signaling pathway regulator-like (S. cerevisiae) 261726 O75663 IP; MS; COMPASS
Bennett EJ , et al. 2010
TKT transketolase 7086 P29401 IP; MS; COMPASS
Bennett EJ , et al. 2010
TMEM165 transmembrane protein 165 55858 Q9HC07 IP; MS; COMPASS
Bennett EJ , et al. 2010
TMTC2 transmembrane and tetratricopeptide repeat containing 2 160335 Q8N394 IP; MS; COMPASS
Bennett EJ , et al. 2010
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial) 7126 Q13829 IP; MS; COMPASS
Bennett EJ , et al. 2010
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial) 7126 Q13829 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial) 7126 Q13829 IP; LC-MS/MS
Huttlin EL , et al. 2015
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a 8797 O00220 IP/WB
Gonzalvez F , et al. 2012
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 8795 O14763 IP/WB
Gonzalvez F , et al. 2012
TNRC6A trinucleotide repeat containing 6A 27327 Q8NDV7 IP; MS; COMPASS
Bennett EJ , et al. 2010
TNRC6B trinucleotide repeat containing 6B 23112 Q9UPQ9 IP; MS; COMPASS
Bennett EJ , et al. 2010
TNRC6C trinucleotide repeat containing 6C 57690 G3XAB8 IP; MS; COMPASS
Bennett EJ , et al. 2010
TOE1 target of EGR1, member 1 (nuclear) 114034 Q96GM8 IP; MS; COMPASS
Bennett EJ , et al. 2010
TOP1 topoisomerase (DNA) I 7150 P11387 IP; MS; COMPASS
Bennett EJ , et al. 2010
TPM3 tropomyosin 3 7170 P06753 IP; MS; COMPASS
Bennett EJ , et al. 2010
TRA2A transformer 2 alpha homolog (Drosophila) 29896 Q13595 IP; MS; COMPASS
Bennett EJ , et al. 2010
TRA2B transformer 2 beta homolog (Drosophila) 6434 P62995 IP; MS; COMPASS
Bennett EJ , et al. 2010
TRAP1 TNF receptor-associated protein 1 10131 Q12931 IP; MS; COMPASS
Bennett EJ , et al. 2010
TRIM28 tripartite motif containing 28 10155 Q13263 IP; MS; COMPASS
Bennett EJ , et al. 2010
TRIM33 tripartite motif containing 33 51592 B3KN30 IP; MS; COMPASS
Bennett EJ , et al. 2010
TRIP13 thyroid hormone receptor interactor 13 9319 Q15645 IP; MS; COMPASS
Bennett EJ , et al. 2010
TRMT10C tRNA methyltransferase 10 homolog C (S. cerevisiae) 54931 Q7L0Y3 IP; MS; COMPASS
Bennett EJ , et al. 2010
TRMT6 tRNA methyltransferase 6 homolog (S. cerevisiae) 51605 Q9UJA5 IP; MS; COMPASS
Bennett EJ , et al. 2010
TROVE2 TROVE domain family, member 2 6738 P10155 IP; MS; COMPASS
Bennett EJ , et al. 2010
TTC37 tetratricopeptide repeat domain 37 9652 Q6PGP7 IP; MS; COMPASS
Bennett EJ , et al. 2010
TTC5 tetratricopeptide repeat domain 5 91875 Q86T04 IP; MS; COMPASS
Bennett EJ , et al. 2010
TTC7B tetratricopeptide repeat domain 7B 145567 Q6PIF1 IP; MS; COMPASS
Bennett EJ , et al. 2010
TTN titin 7273 Q8WZ42 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBA1A tubulin, alpha 1A 7846 Q71U36 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBA1C tubulin, alpha 1c 84790 Q9BQE3 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBA3C tubulin, alpha 3c 7278 Q13748 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBA3D tubulin, alpha 3d 113457 Q13748 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBA4A tubulin, alpha 4a 7277 P68366 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBA4B tubulin, alpha 4b (pseudogene) 80086 Q9H853 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBB tubulin, beta 203068 P07437 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBB1 tubulin, beta 1 class VI 81027 Q9H4B7 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBB2A tubulin, beta 2A class IIa 7280 Q13885 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBB2B tubulin, beta 2B class IIb 347733 Q9BVA1 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBB3 tubulin, beta 3 class III 10381 A8K854 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBB4A tubulin, beta 4A class IVa 10382 P04350 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBB4B tubulin, beta 4B class IVb 10383 P68371 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUBB6 tubulin, beta 6 class V 84617 Q9BUF5 IP; MS; COMPASS
Bennett EJ , et al. 2010
TUFM Tu translation elongation factor, mitochondrial 7284 P49411 IP; MS; COMPASS
Bennett EJ , et al. 2010
TXNDC5 thioredoxin domain containing 5 (endoplasmic reticulum) 81567 Q6EHZ3 IP; MS; COMPASS
Bennett EJ , et al. 2010
U2AF1 U2 small nuclear RNA auxiliary factor 1 7307 Q01081 IP; MS; COMPASS
Bennett EJ , et al. 2010
U2AF2 U2 small nuclear RNA auxiliary factor 2 11338 P26368 IP; MS; COMPASS
Bennett EJ , et al. 2010
U2SURP U2 snRNP-associated SURP domain containing 23350 O15042 IP; MS; COMPASS
Bennett EJ , et al. 2010
UBA1 ubiquitin-like modifier activating enzyme 1 7317 P22314 IP; MS; COMPASS
Bennett EJ , et al. 2010
UBAP2 ubiquitin associated protein 2 55833 Q5T6F2 IP; MS; COMPASS
Bennett EJ , et al. 2010
UBAP2L ubiquitin associated protein 2-like 9898 Q14157 IP; MS; COMPASS
Bennett EJ , et al. 2010
UBB ubiquitin B 7314 P0CG47 IP; MS; COMPASS
Bennett EJ , et al. 2010
UBC ubiquitin C 7316 P63279 IP; MS; COMPASS
Bennett EJ , et al. 2010
UBE2D3 ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 7323 P61077 GST
Plafker KS , et al. 2009
UBE2E1 ubiquitin-conjugating enzyme E2E 1 7324 P51965 GST
Plafker KS , et al. 2009
UBE2E2 ubiquitin-conjugating enzyme E2E 2 7325 Q96LR5 GST
Plafker KS , et al. 2009
UBE2E3 ubiquitin-conjugating enzyme E2E 3 10477 Q969T4 GST
Plafker KS , et al. 2009
UBE2M ubiquitin-conjugating enzyme E2M 9040 P61081 IP/WB
Huang G , et al. 2011
UBR5 ubiquitin protein ligase E3 component n-recognin 5 51366 O95071 IP; MS; COMPASS
Bennett EJ , et al. 2010
UBXN1 UBX domain protein 1 51035 Q04323 IP/WB
Alexandru G , et al. 2008
UBXN7 UBX domain protein 7 26043 O94888 IP/WB
Alexandru G , et al. 2008
UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 56886 Q9NYU2 IP; MS; COMPASS
Bennett EJ , et al. 2010
UMPS uridine monophosphate synthetase 7372 A8K5J1 IP; MS; COMPASS
Bennett EJ , et al. 2010
UPF1 UPF1 regulator of nonsense transcripts homolog (yeast) 5976 Q92900 IP; MS; COMPASS
Bennett EJ , et al. 2010
USP15 ubiquitin specific peptidase 15 9958 Q9Y4E8 IP; MS; COMPASS
Bennett EJ , et al. 2010
USP25 ubiquitin specific peptidase 25 29761 Q9UHP3 IP; MS; COMPASS
Bennett EJ , et al. 2010
USP32 ubiquitin specific peptidase 32 84669 Q8NFA0 IP; MS; COMPASS
Bennett EJ , et al. 2010
USP7 ubiquitin specific peptidase 7 (herpes virus-associated) 7874 Q93009 IP; MS; COMPASS
Bennett EJ , et al. 2010
USP9X ubiquitin specific peptidase 9, X-linked 8239 Q6P468 IP; MS; COMPASS
Bennett EJ , et al. 2010
UST uronyl-2-sulfotransferase 10090 Q9Y2C2 IP; MS; COMPASS
Bennett EJ , et al. 2010
VARS valyl-tRNA synthetase 7407 P26640 IP; MS; COMPASS
Bennett EJ , et al. 2010
VCP valosin containing protein 7415 P55072 IP; MS; COMPASS
Bennett EJ , et al. 2010
VDAC2 voltage-dependent anion channel 2 7417 P45880 IP; LC-MS/MS
Li J , et al. 2016
VIM vimentin 7431 P08670 IP; MS; COMPASS
Bennett EJ , et al. 2010
VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog 63894 Q6IA61 IP; MS; COMPASS
Bennett EJ , et al. 2010
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae) 9525 O75351 IP; MS; COMPASS
Bennett EJ , et al. 2010
WBSCR22 Williams Beuren syndrome chromosome region 22 114049 C9K060 IP; MS; COMPASS
Bennett EJ , et al. 2010
WDR18 WD repeat domain 18 57418 Q9BV38 IP; MS; COMPASS
Bennett EJ , et al. 2010
WDR5 WD repeat domain 5 609012 N/A IP; MS; COMPASS
Bennett EJ , et al. 2010
WDR6 WD repeat domain 6 11180 Q9NNW5 IP; MS; COMPASS
Bennett EJ , et al. 2010
WDR77 WD repeat domain 77 79084 Q9BQA1 IP; MS; COMPASS
Bennett EJ , et al. 2010
WDR81 WD repeat domain 81 124997 Q562E7 IP; MS; COMPASS
Bennett EJ , et al. 2010
WNK4 WNK lysine deficient protein kinase 4 65266 B0LPI0 IP/WB
Shibata S , et al. 2013
WNT7B wingless-type MMTV integration site family, member 7B 7477 P56706 Y2H
Wang J , et al. 2011
XAB2 XPA binding protein 2 56949 Q9HCS7 IP; MS; COMPASS
Bennett EJ , et al. 2010
XPNPEP3 X-prolyl aminopeptidase (aminopeptidase P) 3, putative 63929 Q9NQH7 IP; MS; COMPASS
Bennett EJ , et al. 2010
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 7520 P13010 IP; MS; COMPASS
Bennett EJ , et al. 2010
XRN2 5'-3' exoribonuclease 2 22803 Q9H0D6 IP; MS; COMPASS
Bennett EJ , et al. 2010
YAE1D1 Yae1 domain containing 1 57002 B2RC46 IP; MS; COMPASS
Bennett EJ , et al. 2010
YARS2 tyrosyl-tRNA synthetase 2, mitochondrial 51067 Q9Y2Z4 IP; MS; COMPASS
Bennett EJ , et al. 2010
YBX1 Y box binding protein 1 4904 P67809 IP; MS; COMPASS
Bennett EJ , et al. 2010
YBX3 cold shock domain protein A 8531 P16989 IP; MS; COMPASS
Bennett EJ , et al. 2010
YLPM1 YLP motif containing 1 56252 P49750 IP; MS; COMPASS
Bennett EJ , et al. 2010
YTHDC2 YTH domain containing 2 64848 Q9H6S0 IP; MS; COMPASS
Bennett EJ , et al. 2010
YTHDF1 YTH domain family, member 1 54915 Q9BYJ9 IP; MS; COMPASS
Bennett EJ , et al. 2010
YTHDF2 YTH domain family, member 2 51441 Q9Y5A9 IP; MS; COMPASS
Bennett EJ , et al. 2010
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 7529 P31946 IP; MS; COMPASS
Bennett EJ , et al. 2010
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 7531 P62258 IP; MS; COMPASS
Bennett EJ , et al. 2010
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 7532 P61981 IP; MS; COMPASS
Bennett EJ , et al. 2010
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide 7533 Q04917 IP; MS; COMPASS
Bennett EJ , et al. 2010
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 10971 P27348 IP; MS; COMPASS
Bennett EJ , et al. 2010
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 7534 P63104 IP; MS; COMPASS
Bennett EJ , et al. 2010
ZBTB10 zinc finger and BTB domain containing 10 65986 Q96DT7 IP; MS; COMPASS
Bennett EJ , et al. 2010
ZC3H18 zinc finger CCCH-type containing 18 124245 Q86VM9 IP; MS; COMPASS
Bennett EJ , et al. 2010
ZC3HAV1 zinc finger CCCH-type, antiviral 1 56829 Q7Z2W4 IP; MS; COMPASS
Bennett EJ , et al. 2010
ZCCHC3 zinc finger, CCHC domain containing 3 85364 Q9NUD5 IP; MS; COMPASS
Bennett EJ , et al. 2010
ZCCHC8 zinc finger, CCHC domain containing 8 55596 Q6NZY4 IP; MS; COMPASS
Bennett EJ , et al. 2010
ZFP36L2 ZFP36 ring finger protein-like 2 678 P47974 IP; MS; COMPASS
Bennett EJ , et al. 2010
ZFR zinc finger RNA binding protein 51663 Q05D65 IP; MS; COMPASS
Bennett EJ , et al. 2010
ZMAT4 zinc finger, matrin-type 4 79698 Q9H898 Y2H; bimolecular fluorescence complementation assay
Rolland T , et al. 2014
ZMYM4 zinc finger, MYM-type 4 9202 Q5VZL5 IP; MS; COMPASS
Bennett EJ , et al. 2010
ZNF326 zinc finger protein 326 284695 Q5BKZ1 IP; MS; COMPASS
Bennett EJ , et al. 2010
ZNF444 zinc finger protein 444 55311 Q8N0Y2 IP; LC-MS/MS
Huttlin EL , et al. 2015
ZRANB2 zinc finger, RAN-binding domain containing 2 9406 O95218 IP; MS; COMPASS
Bennett EJ , et al. 2010
ZSWIM8 zinc finger, SWIM-type containing 8 23053 A7E2V4 IP; MS; COMPASS
Bennett EJ , et al. 2010
Ank1 ankyrin 1, erythroid 11733 Q02357 IP/WB
Lange S , et al. 2012
Baz1b bromodomain adjacent to zinc finger domain, 1B 22385 Q9Z277 IP/WB
Mathew R , et al. 2012
Bcl11b B cell leukemia/lymphoma 11B 58208 Q99PV8 IP/WB
Mathew R , et al. 2012
Bcl2 B cell leukemia/lymphoma 2 12043 P10417 IP/WB
Niture SK and Jaiswal AK 2010
Brd8 bromodomain containing 8 78656 Q8R3B7 IP/WB
Mathew R , et al. 2012
Chd4 chromodomain helicase DNA binding protein 4 107932 Q6PDQ2 IP/WB
Mathew R , et al. 2012
Cul3 cullin 3 26554 Q9JLV5 IP/WB
Ibeawuchi SR , et al. 2015
Dmap1 DNA methyltransferase 1-associated protein 1 66233 B1AUK1 IP/WB
Mathew R , et al. 2012
Dnmt1 DNA methyltransferase (cytosine-5) 1 13433 P13864 IP/WB
Mathew R , et al. 2012
Dock2 dedicator of cyto-kinesis 2 94176 Q6A0A3 IP/WB
Mathew R , et al. 2012
Ep400 E1A binding protein p400 75560 Q8CHI8 IP/WB
Mathew R , et al. 2012
Epc1 enhancer of polycomb homolog 1 (Drosophila) 13831 Q8C9X6 IP/WB
Mathew R , et al. 2012
Ezh2 enhancer of zeste homolog 2 (Drosophila) 14056 Q61188 IP/WB
Mathew R , et al. 2012
Hist1h1d histone cluster 1, H1d 14957 P43277 IP/WB
Mathew R , et al. 2012
Hist1h1e histone cluster 1, H1e 50709 P43274 IP/WB
Mathew R , et al. 2012
Hist1h2ae histone cluster 1, H2ae 319166 B2RVF0 IP/WB
Mathew R , et al. 2012
Hmgb2 high mobility group box 2 97165 P30681 IP/WB
Mathew R , et al. 2012
Hrh4 histamine receptor H4 225192 Q91ZY2 IP/WB
Mathew R , et al. 2012
Kctd13 potassium channel tetramerisation domain containing 13 233877 Q8BGV7 IP/WB
Ibeawuchi SR , et al. 2015
Klhl3 kelch-like 3 100503085 E0CZ16 IP/WB
Ibeawuchi SR , et al. 2015
Lbr lamin B receptor 98386 Q3U9G9 IP/WB
Mathew R , et al. 2012
Lgals9 lectin, galactose binding, soluble 9 16859 O08573 IP/WB
Mathew R , et al. 2012
Lmnb1 lamin B1 16906 P14733 IP/WB
Mathew R , et al. 2012
Nacc1 nucleus accumbens associated 1, BEN and BTB (POZ) domain containing 66830 Q7TSZ8 Y2H; GST
Shen H , et al. 2007
Nf1 neurofibromatosis 1 18015 Q04690 IP/WB
Hollstein PE and Cichowski K 2013
Pcm1 pericentriolar material 1 18536 Q9R0L6 IP/WB
Mathew R , et al. 2012
Rbx1 ring-box 1 56438 P62878 IP/WB
Ibeawuchi SR , et al. 2015
Rcc2 regulator of chromosome condensation 2 108911 Q8BK67 IP/WB
Mathew R , et al. 2012
Rhobtb1 Rho-related BTB domain containing 1 69288 Q9DAK3 IP/WB
Ibeawuchi SR , et al. 2015
Rorc RAR-related orphan receptor gamma 19885 P51450 IP/WB
Mathew R , et al. 2012
Satb1 special AT-rich sequence binding protein 1 20230 Q60611 IP/WB
Mathew R , et al. 2012
Stat1 signal transducer and activator of transcription 1 20846 P42225 IP/WB
Mathew R , et al. 2012
Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein 56403 Q3TRV3 IP/WB
Mathew R , et al. 2012
Top2a topoisomerase (DNA) II alpha 21973 Q01320 IP/WB
Mathew R , et al. 2012
Zbtb16 zinc finger and BTB domain containing 16 235320 Q3UQ17 IP/WB
Mathew R , et al. 2012
diablo diablo 53556 Q9VUU5 IP/WB
Strutt H , et al. 2013
inc 31110 Q9W579 IP/WB
Stavropoulos N and Young MW 2011
tim timeless 33571 P49021 IP/WB
Grima B , et al. 2012
ELC1 Elongin-C 856061 Q03071 IP; MS
Harreman M , et al. 2009
btbd6a BTB (POZ) domain containing 6a 100141360 A9JRD8 IP/WB
Sobieszczuk DF , et al. 2010

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