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Relevance to Autism

Genome sequencing of 50 ASD probands and their unaffected parents from a Qatari cohort in Ben-Mahmoud et al., 2024 identified a de novo missense variant in the CUL2 gene that was not in gnomAD or the Qatar Genome Project and was predicted to be damaging with a CADD score of 29.9 in a male ASD proband. Additional de novo variants in the CUL2 gene, including a de novo loss-of-function variant and two de novo missense variants (one of which had a CADD score > 25), were previously reported in ASD probands from the MSSNG cohort, the SPARK cohort, and a Chinese ASD cohort (Yuen et al., 2015; Zhou et al., 2022; Trost et al., 2022; Wang et al., 2023).

Molecular Function

Enables ubiquitin ligase complex scaffold activity and ubiquitin protein ligase binding activity. Involved in ubiquitin-dependent protein catabolic process via the C-end degron rule pathway. Located in nucleoplasm. Part of Cul2-RING ubiquitin ligase complex.

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References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Genome Sequencing Identifies 13 Novel Candidate Risk Genes for Autism Spectrum Disorder in a Qatari Cohort
ASD
DD, epilepsy/seizures
Support
Genomic architecture of autism from comprehensive whole-genome sequence annotation
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Whole-genome sequencing of quartet families with autism spectrum disorder.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1481R001 
 missense_variant 
 c.2057G>T 
 p.Arg686Leu 
 De novo 
  
 Simplex 
 GEN1481R002 
 missense_variant 
 c.2230G>A 
 p.Val744Ile 
 De novo 
  
 Multiplex 
 GEN1481R003 
 splice_region_variant 
 c.603+8G>A 
 p.? 
 De novo 
  
 Simplex 
 GEN1481R004 
 missense_variant 
 c.1984C>T 
 p.Pro662Ser 
 De novo 
  
  
 GEN1481R005 
 stop_gained 
 c.2228_2229insG 
 p.Tyr743_Val744delinsTer 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
10
Deletion-Duplication
 16
 
10
Duplication
 1
 
10
Deletion-Duplication
 1
 
10
Duplication
 2
 

No Animal Model Data Available

 

No Interactions Available
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