HELP     Sign In
Search

Relevance to Autism

A de novo nonsense variant in the CCSER1 gene was identified in an ASD proband from the Autism Sequencing Consortium (De Rubeis et al., 2014), while a paternally-transmitted nonsense variant in this gene was observed in all four affected siblings from an ASD multiplex family from the iHART cohort (Ruzzo et al., 2019). TADA analysis of de novo and transmitted variants from iHART, the Simons Simplex Collection, the Autism Sequencing Consortium, and the Autism Genome Project in Ruzzo et al., 2019 identified CCSER1 as an ASD candidate gene with a false discovery rate (FDR) < 0.1.

Molecular Function

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Mutational Landscape of Autism Spectrum Disorder Brain Tissue
ASD
Recent Recommendation
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1097R001 
 stop_gained 
 c.1786C>T 
 p.Arg596Ter 
 De novo 
  
  
 GEN1097R002 
 stop_gained 
 c.13G>T 
 p.Gly5Ter 
 Familial 
 Paternal 
 Multiplex 
 GEN1097R003 
 missense_variant 
 c.1566T>G 
 p.Asp522Glu 
 Unknown 
  
  
 GEN1097R004 
 synonymous_variant 
 c.1482T>A 
 p.Gly494%3D 
 De novo 
  
  
 GEN1097R005 
 missense_variant 
 c.2362C>G 
 p.Leu788Val 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
4
Duplication
 1
 
4
Deletion
 1
 
4
Deletion
 1
 
4
Deletion
 1
 
4
Deletion-Duplication
 25
 
4
Duplication
 4
 

No Animal Model Data Available

No PIN Data Available
HELP
Copyright © 2017 MindSpec, Inc.