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Relevance to Autism

A de novo frameshift variant in the CBX1 gene was identified in a male ASD proband from the SPARK cohort in Feliciano et al., 2019. Kuroda et al., 2023 described three unrelated individuals with de novo missense variants in CBX1 who presented with a novel neurodevelopmental syndrome characterized by global developmental delay, autism spectrum disorder, hypotonia, and variable dysmorphic features; cytological and chromatin immunoprecipitation experiments demonstrated reduced binding of mutant HP1beta protein to heterochromatin, while Cbx1 mutant mice displayed increased latency-to-peak responses in an acoustic startle with prepulse inhibition assay.

Molecular Function

This gene encodes a highly conserved nonhistone protein, which is a member of the heterochromatin protein family . The protein is enriched in the heterochromatin and associated with centromeres. The protein has a single N-terminal chromodomain which can bind to histone proteins via methylated lysine residues, and a C-terminal chromo shadow-domain (CSD) which is responsible for the homodimerization and interaction with a number of chromatin-associated nonhistone proteins. The protein may play an important role in the epigenetic control of chromatin structure and gene expression.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
ASD, DD, ID
Support
Exome sequencing of 457 autism families recruited online provides evidence for autism risk genes
ASD
Support
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1396R001 
 frameshift_variant 
 c.335del 
 p.Gly112AlafsTer24 
 De novo 
  
  
 GEN1396R002 
 intron_variant 
 c.413+276C>A 
  
 De novo 
  
 Simplex 
 GEN1396R003 
 intron_variant 
 c.-20568C>T 
  
 De novo 
  
 Simplex 
 GEN1396R004 
 missense_variant 
 c.169A>G 
 p.Asn57Asp 
 De novo 
  
 Simplex 
 GEN1396R005 
 missense_variant 
 c.155G>T 
 p.Trp52Leu 
 De novo 
  
 Simplex 
 GEN1396R006 
 missense_variant 
 c.151A>C 
 p.Thr51Pro 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
17
Duplication
 1
 
17
Duplication
 1
 

No Animal Model Data Available

 

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