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Relevance to Autism

A rare duplication in the BTAF1 gene has been identified with ASD (Salyakina et al., 2011).

Molecular Function

This gene encodes a TAF (TATA box-binding protein-associated factor), which associates with TBP (TATA box-binding protein) to form the B-TFIID complex that is required for transcription initiation of genes by RNA polymerase II. This TAF has DNA-dependent ATPase activity, which drives the dissociation of TBP from DNA, freeing the TBP to associate with other TATA boxes or TATA-less promoters.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Copy number variants in extended autism spectrum disorder families reveal candidates potentially involved in autism risk.
ASD
AS
Support
Whole exome sequencing in females with autism implicates novel and candidate genes.
ASD
Support
The contribution of de novo coding mutations to autism spectrum disorder
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Exome sequencing of 457 autism families recruited online provides evidence for autism risk genes
ASD
Support
Recessive gene disruptions in autism spectrum disorder.
ASD
Support
A Statistical Framework for Mapping Risk Genes from De Novo Mutations in Whole-Genome-Sequencing Studies.
ASD
Recent Recommendation
Low load for disruptive mutations in autism genes and their biased transmission.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN298R001 
 copy_number_gain 
  
  
 Familial 
 Maternal 
 Extended multiplex 
 GEN298R002 
 missense_variant 
 c.1241A>T 
 p.Lys414Ile 
 Unknown 
  
 Multiplex 
 GEN298R003a 
 frameshift_variant 
 c.1469del 
 p.Thr490LysfsTer5 
 De novo 
  
 Simplex 
 GEN298R003b 
 splice_site_variant 
 c.1405-11_1424del 
  
 De novo 
  
 Simplex 
 GEN298R004 
 intron_variant 
 c.4710+20T>C 
  
 De novo 
  
 Simplex 
 GEN298R005 
 loss_of_function_variant 
  
  
 De novo 
  
  
 GEN298R006 
 splicing_variant 
  
  
 De novo 
  
  
 GEN298R007a 
 splice_site_variant 
 c.1651-2A>T 
  
 Unknown 
  
 Unknown 
 GEN298R007b 
 splice_site_variant 
 c.1651-2A>T 
  
 Unknown 
  
 Unknown 
 GEN298R008 
 missense_variant 
 c.2396A>G 
 p.Asn799Ser 
 De novo 
  
  
 GEN298R009 
 missense_variant 
 c.740G>A 
 p.Arg247Gln 
 De novo 
  
 Multiplex 
 GEN298R010 
 missense_variant 
 c.2612C>T 
 p.Pro871Leu 
 De novo 
  
  
 GEN298R011 
 missense_variant 
 c.5122G>A 
 p.Val1708Ile 
 De novo 
  
  
 GEN298R012 
 splice_region_variant 
 c.3199+4T>C 
  
 De novo 
  
  
 GEN298R013 
 synonymous_variant 
 c.3705A>G 
 p.Gln1235%3D 
 De novo 
  
  
 GEN298R014 
 missense_variant 
 c.4612T>C 
 p.Ser1538Pro 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
10
Duplication
 1
 
10
Duplication
 1
 
10
Duplication
 1
 
10
Deletion
 3
 

No Animal Model Data Available

 

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