Summary Statistics:
ASD Reports: 7
Recent Reports: 0
Annotated variants: 42
Associated CNVs: 12
Evidence score: 3
Gene Score:
Relevance to Autism
Rare variants in the BCL11B gene are responsible for intellectual developmental disorder with dysmorphic facies, speech delay, and T-cell abnormalities (OMIM 618092), a neurodevelopmental disorder characterized by developmental delay, intellectual disability, behavioral abnormalities including autism spectrum disorder or autistic features, dysmorphic features, and immunological abnormalities (Lessel et al., 2018; Sabbagh et al., 2023). Additional rare de novo variants in the BCL11B gene, including a de novo loss-of-function variant and three de novo missense variants, have been reported in ASD probands (Satterstrom et al., 2020; Zhou et al., 2022).
Molecular Function
This gene encodes a C2H2-type zinc finger protein and is closely related to BCL11A, a gene whose translocation may be associated with B-cell malignancies. Although the specific function of this gene has not been determined, the encoded protein is known to be a transcriptional repressor, and is regulated by the NURD nucleosome remodeling and histone deacetylase complex.
References
Support
Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
ASD
Support
Intellectual developmental disorder with dysmorphi
Autistic features
Support
ASD
Learning disability
Support
Integrating de novo and inherited variants in 42
ASD
GEN1423R001
frameshift_variant
c.1952_1964del
p.Val651GlyfsTer68
De novo
GEN1423R002
frameshift_variant
c.1887_1893del
p.Gly630ThrfsTer91
De novo
GEN1423R003
frameshift_variant
c.1967del
p.Gly656AlafsTer67
De novo
GEN1423R004
frameshift_variant
c.1887_1893del
p.Gly630ThrfsTer91
De novo
GEN1423R005
frameshift_variant
c.2616_2617del
p.Met873GlufsTer11
De novo
GEN1423R006
frameshift_variant
c.1944_1965del
p.Gly649AlafsTer67
De novo
GEN1423R007
missense_variant
c.2476T>C
p.Cys826Arg
De novo
GEN1423R008
missense_variant
c.2258C>G
p.Ser753Cys
De novo
GEN1423R009
frameshift_variant
c.657del
p.Ser220AlafsTer61
De novo
GEN1423R010
copy_number_loss
De novo
GEN1423R011
frameshift_variant
c.1500dup
p.Gly501ArgfsTer16
De novo
GEN1423R012
frameshift_variant
c.784_820del
p.Arg262TrpfsTer7
De novo
GEN1423R013
frameshift_variant
c.1216_1217insACGC
p.Thr406AsnfsTer112
De novo
GEN1423R014
stop_gained
c.682C>T
p.Gln228Ter
De novo
GEN1423R015
copy_number_loss
De novo
GEN1423R016
copy_number_loss
De novo
GEN1423R017
frameshift_variant
c.2646_2649del
p.Asn884ThrfsTer112
De novo
GEN1423R018
copy_number_loss
De novo
GEN1423R019
frameshift_variant
c.1944_1965del
p.Gly649AlafsTer67
De novo
GEN1423R020
stop_gained
c.2473A>T
p.Lys825Ter
Familial
Maternal
GEN1423R021
frameshift_variant
c.600_606dup
p.Glu203SerfsTer15
Familial
Maternal
Multiplex
GEN1423R022
frameshift_variant
c.600_606dup
p.Glu203SerfsTer15
Unknown
GEN1423R023
initiator_codon_variant
c.2T>C
p.Met1?
De novo
GEN1423R024
missense_variant
c.2174C>A
p.Pro725His
De novo
GEN1423R025
frameshift_variant
c.2446_2453dup
p.Gly819AlafsTer27
De novo
Simplex
GEN1423R026
frameshift_variant
c.1944_1965del
p.Gly649AlafsTer67
De novo
Simplex
GEN1423R027
frameshift_variant
c.2668del
p.Ala890ProfsTer106
De novo
Simplex
GEN1423R028
frameshift_variant
c.1499dup
p.Thr501HisfsTer15
De novo
Simplex
GEN1423R029
missense_variant
c.2421C>G
p.Asn807Lys
De novo
GEN1423R030
frameshift_variant
c.239del
p.Cys80LeufsTer76
De novo
GEN1423R031
frameshift_variant
c.1597del
p.Asp533ThrfsTer29
Familial
Maternal
GEN1423R032
translocation
De novo
GEN1423R033
translocation
De novo
Simplex
GEN1423R034
stop_gained
c.1495G>T
p.Glu499Ter
De novo
GEN1423R035
stop_gained
c.1362_1364del
p.Tyr454_Lys455delinsTer
De novo
Simplex
GEN1423R036
frameshift_variant
c.1549del
p.Arg517AlafsTer45
De novo
Simplex
GEN1423R037
missense_variant
c.56C>G
p.Thr19Ser
De novo
GEN1423R038
missense_variant
c.2631C>G
p.His877Gln
De novo
Simplex
GEN1423R039
frameshift_variant
c.2494dup
p.Ala832GlyfsTer53
De novo
GEN1423R040
missense_variant
c.13A>C
p.Lys5Gln
De novo
Simplex
GEN1423R041
missense_variant
c.2036C>T
p.Pro679Leu
Familial
Paternal
Multiplex
GEN1423R042
frameshift_variant
c.2037del
p.Leu681SerfsTer42
De novo
No Common Variants Available
14
Deletion-Duplication
22
No Animal Model Data Available
No PIN Data Available