HELP     Sign In
Search

Relevance to Autism

An X-chromosome-wide association (XWAS) study of 6,873 individuals with autism from MSSNG, SSC, and SPARK (5,639 males and 1,234 females) and 8,981 controls (3,911 males and 5,070 females) in Mendes et al., 2024 identified two SNPs in the ASB9 gene that reached the significance threshold for association (P < 7.9E-06) in a sex-stratified male-XWAS analysis. Furthermore, rare predicted damaging SNVs (<0.1% frequency in gnomAD) in the ASB9 gene were found to have a higher frequency in male ASD cases from MSSNG, SSC, and SPARK compared to other family members.

Molecular Function

This gene encodes a member of the ankyrin repeat and suppressor of cytokine signaling (SOCS) box protein family. Members of this family can interact with the elongin B-C adapter complex via their SOCS box domain and further complex with the cullin and ring box proteins to form E3 ubiquitin ligase complexes. They may function to mediate the substrate-recognition of the E3 ubiquitin ligases.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Chromosome X-wide common variant association study in autism spectrum disorder
ASD

Rare

No Rare Variants Available

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN1490C001 
 intron_variant 
 rs12687599 
 c.94+4000G>T/c.94+4000G>A 
  
 6,873 individuals with autism from MSSNG, SSC, and SPARK (5,639 males and 1,234 females) and 8,981 controls (3,911 males and 5,070 females) 
 Discovery 
 GEN1490C002 
 2_KB_upstream_variant 
 rs5935919 
 T>A/T>G 
  
 6,873 individuals with autism from MSSNG, SSC, and SPARK (5,639 males and 1,234 females) and 8,981 controls (3,911 males and 5,070 females) 
 Discovery 
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
X
Deletion-Duplication
 2
 
X
Deletion
 3
 
X
Deletion
 4
 
X
Deletion-Duplication
 1
 
X
Deletion
 1
 
X
Duplication
 1
 
X
Duplication
 2
 
X
Deletion
 4
 
X
Deletion
 1
 
X
Duplication
 6
 
X
Deletion
 1
 
X
Deletion-Duplication
 22
 

No Animal Model Data Available

No PIN Data Available
HELP
Copyright © 2017 MindSpec, Inc.