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Relevance to Autism

Arhgef10 knockout mice were found to exhibit reduced social interaction, hyperactivity, decreased depression-like and anxiety-like behavior, increased levels of neurotransmitters including serotonin, norepinephrine, and dopamine in different brain regions, and decreased levels of monoamine oxidase A (MAO-A) in several brain regions (Lu et al., 2018). De novo and inherited missense variants in ARHGEF10 have also been identified in ASD probands (De Rubeis et al., 2014; Li et al., 2017).

Molecular Function

This gene encodes a Rho guanine nucleotide exchange factor (GEF). Rho GEFs regulate the activity of small Rho GTPases by stimulating the exchange of guanine diphosphate (GDP) for guanine triphosphate (GTP) and may play a role in neural morphogenesis. Mutations in this gene are associated with slowed nerve conduction velocity (SNCV).

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Impairment of social behaviors in Arhgef10 knockout mice.
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
Targeted sequencing and functional analysis reveal brain-size-related genes and their networks in autism spectrum disorders.
ASD
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
8p23.2-pter Microdeletions: Seven New Cases Narrowing the Candidate Region and Review of the Literature
DD, epilepsy/seizures

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN1007R001 
 missense_variant 
 c.53A>G 
 p.Tyr18Cys 
 De novo 
  
  
 GEN1007R002 
 missense_variant 
 c.3034G>A 
 p.Ala1012Thr 
 De novo 
  
  
 GEN1007R003 
 missense_variant 
 c.643G>C 
 p.Asp215His 
 Familial 
  
  
 GEN1007R004 
 missense_variant 
 c.3335C>T 
 p.Ser1112Phe 
 Familial 
  
  
 GEN1007R005 
 missense_variant 
 c.607A>G 
 p.Thr203Ala 
 Familial 
  
  
 GEN1007R006 
 splice_site_variant 
 c.193+2T>C 
  
 Familial 
 Maternal 
 Multiplex 
 GEN1007R007 
 copy_number_loss 
  
  
 Unknown 
  
  
 GEN1007R008 
 missense_variant 
 c.898C>T 
 p.Arg300Cys 
 De novo 
  
 Simplex 
 GEN1007R009 
 splice_region_variant 
 c.266-4C>G 
  
 De novo 
  
  
 GEN1007R010 
 synonymous_variant 
 c.2475G>A 
 p.Thr825%3D 
 De novo 
  
  
 GEN1007R011 
 synonymous_variant 
 c.3423C>T 
 p.His1141%3D 
 De novo 
  
  
 GEN1007R012 
 synonymous_variant 
 c.531C>T 
 p.Cys177%3D 
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
8
Deletion
 1
 
8
Deletion-Duplication
 37
 
8
Duplication
 1
 
8
Duplication
 1
 
8
Deletion
 3
 
8
Duplication
 6
 
8
Deletion
 27
 
8
Duplication
 12
 
8
Duplication
 1
 

Model Summary

Arhgef10 knockout mice showed social interaction impairment, hyperactivity, and decreased depression-like and anxiety-like behavior and no change in spatial learning in the Morris water maze. Neurotransmitters serotonin, norepinephrine, and dopamine were increased in different brain regions of the Arhgef10 knockout mice. Monoamine oxidase A (MAO-A) levels were decreased in several brain regions of the Arhgef10 knockout mice (Lu D-H, Mol. Aut., 2018).

References

Type
Title
Author, Year
Primary
Impairment of social behaviors in Arhgef10 knockout mice.

M_ARHGEF10_1_KO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: Arhgef10 knockout mice were generated by the deletion of exon 4 and exon 5 using the Cre-loxP site-specific knockout. .
Allele Type: Knockout
Strain of Origin: 129S1/Sv
Genetic Background: C57BL/6J
ES Cell Line: 129S1/Sv
Mutant ES Cell Line: 129S1/Sv
Model Source: 29456827

M_ARHGEF10_1_KO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
General locomotor activity: ambulatory activity1
Increased
Description: Mutant mice show a higher level of locomotor activity in open field, measured by beam breaks, compared to controls.
Exp Paradigm: NA
 Open field test
 2-3 months
Neurotransmitter metabolism1
Decreased
Description: Mutants show decrease in mao-a levels in the frontal cortex and amygdala in comparison with controls.
Exp Paradigm: Mao-a and mao-b are the key enzymes that degrade ne and 5-ht.
 Western blot
 2-3 months
Neurotransmitter release: serotonin1
Increased
Description: Mutants show increased serotonin content in the frontal cortex and amygdala in comparison with wildtype controls.
Exp Paradigm: The frontal cortex, striatum, hippocampus, and amygdala were analyzed by hplc with electrochemical detection (ecd) to determine the content of dopamine, 5-ht, ne, and their metabolites.
 High-performance liquid chromatography (hplc)
 2.5 - 3 months
Neurotransmitter release: catecholamines1
Increased
Description: Mutants show increased norepinephrine in the frontal cortex and amygdala in comparison with wildtype controls.
Exp Paradigm: The frontal cortex, striatum, hippocampus, and amygdala were analyzed by hplc with electrochemical detection (ecd) to determine the content of dopamine, 5-ht, ne, and their metabolites.
 High-performance liquid chromatography (hplc)
 2.5 - 3 months
Neurotransmitter release: catecholamines1
Increased
Description: Mutants show increased dopamine content in the striatum and amygdala in comparison with wildtype controls.
Exp Paradigm: The frontal cortex, striatum, hippocampus, and amygdala were analyzed by hplc with electrochemical detection (ecd) to determine the content of dopamine, 5-ht, ne, and their metabolites.
 High-performance liquid chromatography (hplc)
 2.5 - 3 months
Social approach1
Decreased
Description: Mutants spend less time with an unfamiliar stimulus mouse compared to controls.
Exp Paradigm: NA
 Three-chamber social approach test
 2-3 months
Social memory1
Decreased
Description: Mutants spend less time in the chamber containing the second unfamiliar mouse compared to controls. mutants show no change in time spent interacting with the first or second unfamiliar mouse compared to controls.
Exp Paradigm: C57bl/6j mice were used as the stranger mice.
 Three-chamber social approach test
 2-3 months
Depression1
Decreased
Description: Mutant mice show reduction of immobility in the tail suspension test compared to controls.
Exp Paradigm: NA
 Tail suspension test
 2-3 months
Depression1
Decreased
Description: Mutant mice show reduction of immobility in the forced swim test compared to controls.
Exp Paradigm: NA
 Forced swim test
 2-3 months
Anxiety1
Decreased
Description: Mutants spend more time in the open arms of the elevated plus maze compared to controls. mutants showed increased number of entries into the open arms of the elevated plus maze compared to controls.
Exp Paradigm: NA
 Elevated plus maze test
 2-3 months
Targeted expression1
Decreased
Description: Mutants show decreased expression of arhgef10 in the whole brain compared to controls. mutants show no expression of arhgef10 in the brain whereas wildtype controls show arhgef10 protein expressed in the frontal cortex, striatum, hippocampus, and amygdala.
Exp Paradigm: NA
 Western blot
 2-3 months
Anxiety1
 No change
 Open field test
 2-3 months
Spatial reference memory1
 No change
 Morris water maze test
 2-3 months
Spatial working memory1
 No change
 Morris water maze test
 2-3 months
Metabolite levels: neurometabolites1
 No change
 High-performance liquid chromatography (hplc)
 2.5 - 3 months
Protein expression level evidence1
 No change
 Western blot
 2-3 months
General locomotor activity1
 No change
 Three-chamber social approach test
 2-3 months
Brain cytoarchitecture1
 No change
 Immunohistochemistry
 NA
Neurotransmitter metabolism1
 No change
 Western blot
 2-3 months
Neurotransmitter release: catecholamines1
 No change
 High-performance liquid chromatography (hplc)
 2.5 - 3 months
Neurotransmitter release: serotonin1
 No change
 High-performance liquid chromatography (hplc)
 2.5 - 3 months
Sensorimotor gating1
 No change
 Prepulse inhibition
 2-3 months
Startle response: acoustic stimulus1
 No change
 Acoustic startle reflex test
 2-3 months
Rearing behavior1
 No change
 Open field test
 2-3 months
 Not Reported: Circadian sleep/wake cycle, Communications, Developmental profile, Immune response, Maternal behavior, Physiological parameters, Repetitive behavior, Seizure

 

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