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Relevance to Autism

A rare CNV in the AGMO (TMEM195) gene has been identified with autism in AGRE, NIMH and additional cohorts (Sebat et al., 2007).

Molecular Function

The protein encoded by this gene is a tetrahydrobiopterin- and iron-dependent enzyme that cleaves the ether bond of alkylglycerols. Sequence comparisons distinguish this protein as forming a third, distinct class of tetrahydrobiopterin-dependent enzymes.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Strong association of de novo copy number mutations with autism.
ASD
Support
Segregating patterns of copy number variations in extended autism spectrum disorder (ASD) pedigrees
ASD
Support
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
ASD
Support
Mutations in Human Accelerated Regions Disrupt Cognition and Social Behavior.
ASD
Support
Synaptic, transcriptional and chromatin genes disrupted in autism.
ASD
Support
A discovery resource of rare copy number variations in individuals with autism spectrum disorder.
ASD
Support
Direct measure of the de novo mutation rate in autism and schizophrenia cohorts.
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN253R001 
 copy_number_loss 
  
  
 De novo 
  
 Simplex 
 GEN253R002 
 missense_variant 
 c.835T>C 
 p.Phe279Leu 
 De novo 
  
  
 GEN253R003 
 copy_number_loss 
  
  
 Unknown 
  
 Unknown 
 GEN253R004 
 missense_variant 
 c.473C>T 
 p.Thr158Ile 
 De novo 
  
 Simplex 
 GEN253R005 
 intron_variant 
 c.1263+13066del 
  
  
  
 Unknown 
 GEN253R006 
 stop_gained 
 c.1213C>T 
 p.Arg405Ter 
 Familial 
 Paternal 
 Multiplex 
 GEN253R007 
 frameshift_variant 
 c.842dup 
 p.Trp282MetfsTer13 
 Familial 
 Paternal 
 Multiplex 
 GEN253R008 
 splice_site_variant 
 c.822+2T>C 
  
 Familial 
 Maternal 
 Multiplex 
 GEN253R009 
 copy_number_loss 
  
  
 Familial 
 Paternal 
 Simplex 
 GEN253R010 
 frameshift_variant 
 c.1314_1315insA 
 p.Leu439ThrfsTer10 
 Familial 
 Maternal 
 Multiplex 
 GEN253R011 
 stop_gained 
 c.1213C>T 
 p.Arg405Ter 
 Familial 
 Paternal 
 Multiplex 
 GEN253R012 
 frameshift_variant 
 c.1016_1017del 
 p.Thr339SerfsTer12 
 Familial 
 Maternal 
 Multiplex 
 GEN253R013 
 frameshift_variant 
 c.920_921insG 
 p.Lys308Ter 
 Familial 
 Maternal 
 Multiplex 
 GEN253R014 
 splice_site_variant 
 c.677-1G>C 
  
 Familial 
 Maternal 
 Multiplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
7
Deletion-Duplication
 28
 
7
Deletion-Duplication
 12
 
7
Deletion
 1
 
7
Deletion
 1
 
7
Deletion
 1
 
7
Deletion
 1
 
7
Duplication
 1
 
7
Duplication
 1
 
7
Duplication
 1
 
7
Deletion
 2
 

No Animal Model Data Available

 

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