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Relevance to Autism

A recurrent homozygous nonsense variant in the ABCA10 gene (p.Arg1322Ter) was found to segregate with ASD in two out of four multiplex families (Lim et al., 2013).

Molecular Function

The membrane-associated protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intracellular membranes. The probable transporter encoded by this gene may play a role in macrophage lipid homeostasis.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Rare complete knockouts in humans: population distribution and significant role in autism spectrum disorders.
ASD
Support
Integrating de novo and inherited variants in 42
ASD
Support
Whole-genome sequencing identifies novel genes for autism in Chinese trios
ASD

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN749R001a 
 stop_gained 
 c.3964C>T 
 p.Arg1322Ter 
 Familial 
 Both parents 
 Multiplex 
 GEN749R002a 
 stop_gained 
 c.3964C>T 
 p.Arg1322Ter 
 Familial 
 Both parents 
 Multiplex 
 GEN749R003a 
 stop_gained 
 c.3964C>T 
 p.Arg1322Ter 
 Familial 
 Both parents 
 Multiplex 
 GEN749R004a 
 stop_gained 
 c.3964C>T 
 p.Arg1322Ter 
 Familial 
 Both parents 
 Multiplex 
 GEN749R005 
 missense_variant 
 c.3145T>A 
 p.Ser1049Thr 
 De novo 
  
  
 GEN749R006 
 synonymous_variant 
 c.393T>C 
 p.Ile131= 
 De novo 
  
 Simplex 
 GEN749R007 
 frameshift_variant 
 c.3795_3813del 
 p.Gln1266Ter 
 Familial 
 Paternal 
 Multiplex 
 GEN749R008 
 frameshift_variant 
 c.2836del 
 p.Val946PhefsTer7 
 Familial 
 Maternal 
 Multiplex 
 GEN749R009 
 splice_region_variant 
 c.3283-4dup 
  
 De novo 
  
 Simplex 

Common

No Common Variants Available
Chromosome
CNV Locus
CNV Type
# of studies
Animal Model
17
Duplication
 1
 
17
Duplication
 1
 
17
Duplication
 1
 
17
Duplication
 1
 
17
Deletion
 1
 
17
Deletion
 2
 
17
Duplication
 1
 

No Animal Model Data Available

No PIN Data Available
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