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Xq13.2-q21.1CNV Type: Duplication


Largest CNV size: 7000000 bp

Statistics Box:
Number of Reports: 1



Summary Information

Summary statement in development

Additional Locus Information

Genome browsers

USCS Symbol             NCBI Symbol

Decipher

            Decipher Symbol

References

Major Reports

Title
Author, Year
Report Class
CNV Type

No Major Reports

Minor Reports

Title
Author, Year
Report Class
CNV Type
Interpretation of clinical relevance of X-chromosome copy number variations identified in a large cohort of individuals with cognitive disorders an...
Duplication

Cases

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 willemsen_12_DD/ID_discovery_cases
 Individuals referred between Jan. 2003 and August 2010 to diagnostic center at Dept. of Human Genetics, Radboud Univ. Mijmegen Medical Centre, Nijmegen, The Netherlands for genome-wide array analysis (emphasis on X chromosome CNVs)
 4407
 Majority of cases: indication of developmental delay/intellectual disability [with or without other neuropsychiatric disorders (ASD, ADHD, etc.) and/or congenital anomalies]. Minority of cases: congenital anomalies or behavioral problems without DD/ID.
 2/3 of cases: age range of 1-18 yrs.
 54.5% Male
 7000000
 0
 1
 1

Controls

No Control Data Available

Cases

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
 willemsen_12_DD/ID_discovery_cases
  Netherlands
 aCGH, array SNP
  Agilent 32K BAC array, Affymetrix 250K
 
 CNAG V2.0 (SNP array)
 None

Controls

No Control Data Available

Cases

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  willemsen_12_DD/ID_discovery_cases-case11
 
 M
 Intellectual disability
 Minor facial and genital anomalies, short stature, broad thorax
 Severe ID
 73253439
 80207845
  6954407
 GRCh38
 Duplication
 No

Controls

No Control Data Available

Cases

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
 willemsen_12_DD/ID_discovery_cases-case11
 
 
 De novo
 
 
 YWHAZP8,RNU6-1044P,MORF4L1P6,RPL7P53,SEPHS1P4,RPSAP14,UHRF2P1,DDX3P2,MKRN5P,ATP5MDP1,MIR421,MIR374B,MIR374C,RN7SL648P,MIR545,MIR374A,ZCCHC13,RN7SL790P,THAP12P1,RPS7P14,HNRNPA1P25,PABPC1P3,RNU6-330P,BUD31P2,RNU6-562P,RPL21P134,PCNPP4,BRAFP1,MAGEE2,SAR1AP4,PBDC1,RNU6-867P,LDHBP2,MAGEE1,RNA5SP508,TRAPPC13P1,MIR384,MIR325,RNA5SP509,SPRYD7P1,FGF16,FABP5P15,RNU6-854P,RN7SL460P,PGAM4,HMGN1P34,UBE2V1P7,RTL3,PPATP2,LPAR4,RPL7P54,MIR4328,CTHRC1P1,KIF4CP,CDX4,XIST,FXYD6P3,DDX3P1,RAB11FIP1P1,RLIM,UPRT,TTC3P1,COX7B,TAF9B,FNDC3CP,CYSLTR1,P2RY10,P2RY10BP,ITM2A,TBX22,MAP2K4P1,CHIC1,TSIX,JPX,FTX,BMP2KL,NEXMIF,ABCB7,MIR325HG,MAGT1,ATP7A,PGK1,GPR174,SLC16A2,ATRX,ZDHHC15
 

Controls

No Control Data Available
No Animal Model Data Available
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