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9p21.1-p11.2CNV Type: Duplication


Largest CNV size: 1650000 bp

Statistics Box:
Number of Reports: 1



Summary Information

A duplication within this loci was identified in a Greek ASD proband who also presented with hyperactivity (Oikonomakis et al., 2016).

Additional Locus Information

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USCS Symbol             NCBI Symbol

Decipher

            Decipher Symbol

References

Major Reports

Title
Author, Year
Report Class
CNV Type

No Major Reports

Minor Reports

Title
Author, Year
Report Class
CNV Type
Recurrent copy number variations as risk factors for Autism Spectrum Disorders: analysis of the clinical implications.
Duplication

Cases

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 oikonomakis_16_ASD_discovery_cases
 ASD cases evaluated with chromosomal microarray (CMA) from 2008-2015
 195
 Cases assessed for ASD according to DSM-IV behavioral criteria
 Range, 1-38 yrs.
 64.61% Male
 165000
 0
 1
 1

Controls

No Control Data Available

Cases

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
 oikonomakis_16_ASD_discovery_cases
  Greece
 aCGH
  Agilent 244K, 4x180K, or 4x180K (SurePrint G3 arrays)
 
 
 None

Controls

No Control Data Available

Cases

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  oikonomakis_16_ASD_discovery_cases-case615
 1 yr.
 F
 ASD
 Case was assessed for ASD according to DSM-IV behavioral criteria. Clinical characteristics other than ASD: hyperactivity
 
 40529065
 67217006
  26687942
 GRCh38
 Duplication
 No

Controls

No Control Data Available

Cases

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
 oikonomakis_16_ASD_discovery_cases-case615
 
 
 Unknown
 
 
 IGKV1OR9-2,RNU6-156P,MIR1299,FOXD4L6,MIR4477A,RNA5SP530,CDK2AP2P1,MYO5BP1,RN7SL565P,RBM17P3,RN7SL343P,FAM74A7,SDR42E1P2,ATP5F1AP1,RAB28P3,RBPJP6,FGF7P5,FGF7P4,ADGRF5P2,MEP1AP4,RNU6-599P,SNX18P5,CYP4F60P,CNN2P4,RN7SL462P,RN7SL722P,FAM27C,FAM242E,RN7SL544P,FGF7P7,CNTNAP3P5,RBPJP7,RAB28P2,ATP5F1AP7,SDR42E1P3,FKBP4P7,LINC01410,RNA5SP283,PTGER4P2,CDK2AP2P2,MYO5BP2,ADGRF5P1,FGF7P8,BMS1P9,MYO5BP3,CDK2AP2P3,PTGER4P3,RNA5SP284,DUX4L50,MIR4477B,RNU6-1193P,SNX18P9,CYP4F25P,CNN2P3,GXYLT1P6,BMS1P11,IGKV1OR-2,BNIP3P4,RNU6-1293P,IGKV1OR9-1,FOXD4L5,FOXD4L4,IGKV1OR-3,SNX18P4,RNU6-538P,RBPJP2,RAB28P4,ATP5F1AP10,SDR42E1P4,FKBP4P8,FAM74A3,SPATA31A3,RN7SL422P,RBM17P2,BMS1P14,SPATA31A6,FKBP4P6,GXYLT1P5,SPATA31A5,FAM74A6,SPATA31A7,FAM242D,CNTNAP3P1,AQP7P4,AQP7P1,FRG1JP,ANKRD20A4,AQP7P2,BMS1P12,CBWD4P,FRG1KP,CBWD5,BMS1P13,AQP7P3,GXYLT1P4,ANKRD20A3,ZNF658,FRG1HP,PGM5P2,CBWD6,FAM242F,ANKRD20A7P,FAM74A4,CNTNAP3C,FGF7P6,LINC01189,BMS1P10,CNTNAP3B,CNTNAP3P2
 

Controls

No Control Data Available
No Animal Model Data Available
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