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7q31.31-q31.33CNV Type: Deletion


Largest CNV size: 5400000 bp

Statistics Box:
Number of Reports: 1



Summary Information

Summary statement in development

Additional Locus Information

Genome browsers

USCS Symbol             NCBI Symbol

Decipher

            Decipher Symbol

References

Major Reports

Title
Author, Year
Report Class
CNV Type
Submicroscopic deletion in 7q31 encompassing CADPS2 and TSPAN12 in a child with autism spectrum disorder and PHPV.
Deletion

Minor Reports

Title
Author, Year
Report Class
CNV Type

No Minor Reports

Cases

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 okamoto_11_ASD_discovery_cases
 3 yr old autistic male with persistent hyperplastic primary vitreous (PHPV), born to non-consanguineous healthy parents.
 1
 ASD (DSM-VI criteria)
 3 yr. 8 mo.
 Male
 5400000
 1
 0
 1

Controls

No Control Data Available

Cases

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
 okamoto_11_ASD_discovery_cases
  Japanese
 aCGH
  Agilent 44K
 
 
 FISH

Controls

No Control Data Available

Cases

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  okamoto_11_ASD_discovery_cases-case1
 3 yr. 8 mo.
 M
 ASD
 Diagnosed with ASD (based on DSM-VI criteria). Normal gross motor development, delayed verbal development. Impaired social interactions, poor social skills, strict adherence to routine behaviors, stereotypic movements, hyperactivity. No ataxic movement. EEG showed occipital epileptic discharges, but no seizures. No specific brain MRI findings in CNS. Vision: bilateral PHPV, bilateral firbous intraocular tissue on brain MRI, bilateral posterior echogenic bands on ultrasound, congenital nystagmus, low visual acuity. Dysmorphic features (round face, low-set ears, broad eyebrows, apparent hypertelorism, blepharophimosis, hypoplastic alae nasi, long philtrum, small mouth). Growth parameters: height 88.6 cm (-2.4 SD), weight 11.7 kg (-1.8 SD), head circumference 46.8 cm (-2.4 SD). Karyotype: 46, XY, inv(4)(p14;q21).
 Mild intellectual disability. DQ=76 (standard Japanese method).
 
 
  5400000
 NCBI36
 Deletion
 Yes

Controls

No Control Data Available

Cases

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
 okamoto_11_ASD_discovery_cases-case1
 FISH
 
 De novo
 Simplex
 NA
 KCND2, TSPAN12, ING3, C7orf58, WNT16, FAM3C, LOC392979, PTPRZ1, AASS, FEZ1, CADPS2, RNF133, RNF146, AK058116, TAS2R16, SLC13A1, IQUB, NDUFA5, ASB15, LMOD2, WASL, HYAL4, SPAM1, LC136157, GPR37, POT1
 

Controls

No Control Data Available
No Animal Model Data Available
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