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6q22.1-q22.31CNV Type: Deletion


Largest CNV size: 5400000 bp

Statistics Box:
Number of Reports: 1



Summary Information

A de novo 5.4-Mb deletion affecting the 6q22.1-q22.31 region was identified in a female ASD proband in Munnich et al., 2019.

Additional Locus Information

Genome browsers

USCS Symbol             NCBI Symbol

Decipher

            Decipher Symbol

References

Major Reports

Title
Author, Year
Report Class
CNV Type
Impact of on-site clinical genetics consultations on diagnostic rate in children and young adults with autism spectrum disorder.
Deletion

Minor Reports

Title
Author, Year
Report Class
CNV Type

No Minor Reports

Cases

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 munnich_19_ASD_discovery_cases
 Children and young adults with ASD recruited from 26 day-care hospitals and specialized institutions within the Greater Paris region
 502
 Diagnosis of ASD based on DSM criteria, with standardized clinical assessment performed using CARS, ADOS, and/or ADI-R
 < 10 years, 34 cases; 11-20 years, 194 cases; 21-30 years, 211 cases; > 30 years, 63 cases
 69.92% Male
 5400000
 1
 0
 1

Controls

No Control Data Available

Cases

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
 munnich_19_ASD_discovery_cases
  France
 aCGH, karyotyping
  Agilent 60K
 
 
 FISH

Controls

No Control Data Available

Cases

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  munnich_19_ASD_discovery_cases-case7
 N/A
 F
 ASD
 Case diagnosed with ASD based on DSM criteria. CNV detected by aCGH (Agilent 60K)
 
 117677375
 123059574
  5382200
 GRCh38
 Deletion
 Yes

Controls

No Control Data Available

Cases

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
 munnich_19_ASD_discovery_cases-case7
 FISH
 
 De novo
 
 
 SSXP10,MIR548B,RNU6-194P,MIR3144,RNU6-214P,RNA5SP215,COX6A1P3,RNU6-1286P,RNU4-35P,RNU4-76P,RNU2-8P,SLC25A5P7,RPL23AP48,HMGB3P18,RNU1-18P,RN7SL564P,ATP5MGP2,PLN,SELENOKP3,ASF1A,GJA1,SERINC1,FABP7,SMPDL3A,CLVS2,NUS1,SLC35F1,MCM9,FAM184A,MAN1A1,TBC1D32,HSF2,CEP85L,PKIB
 

Controls

No Control Data Available
No Animal Model Data Available
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