20q11.21-q11.23CNV Type: Duplication
Largest CNV size: 5872059 bp
Statistics Box:
Number of Reports: 1
Number of Reports: 1
Summary Information
A de novo duplication within this locus was identified in an ASD proband from the Simons Simplex Collection (Krumm et al., 2015).
Additional Locus Information
References
Major Reports
Title
Author, Year
Report Class
CNV Type
Minor Reports
Title
Author, Year
Report Class
CNV Type
No Minor Reports
Cases
Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
krumm_15_ASD_discovery_cases
Probands from the Simons Simplex Collection
2377
Diagnosis of ASD
N/A
N/A
5872059
0
1
1
Controls
Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
krumm_15_ASD_discovery_controls
Unaffected siblings from quad families from the Simons Simplex Collection
1786
Control
N/A
N/A
0
0
0
0
Cases
Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
krumm_15_ASD_discovery_cases
N/A
WES
CoNIFER, XHMM
Solid phase hybridization (Illumina 1M, 1 M Duo, or Omni 2.5)
Controls
Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
krumm_15_ASD_discovery_controls
N/A
WES
CoNIFER, XHMM
None
Cases
Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
krumm_15_ASD_discovery_cases-case13036.p1
N/A
Male
ASD
Proband from the Simons Simplex Collection (SSC). Family type: Quad
31257663
37089122
5831460
GRCh38
Duplication
Yes
Controls
No Control Data Available
Cases
Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
krumm_15_ASD_discovery_cases-case13036.p1
Illumina 1MDuo
De novo
Simplex
Segregated
DEFB115,DKKL1P1,DEFB116,RPL31P3,RNA5SP480,DEFB117,DEFB118,DEFB119,REM1,LINC00028,MCTS2P,HM13-IT1,RNU6-384P,ID1,MIR3193,COX4I2,ABALON,FOXS1,RNU1-94P,RNA5SP481,RNA5SP482,RSL24D1P6,TSPY26P,MIR1825,BAK1P1,BPIFB6,PUDPP3,SOCS2P1,RPL12P3,BPIFB9P,C20orf144,ACTL10,RPL31P2,TPM3P2,PIGPP3,RALY-AS1,MIR4755,RPS2P1,XPOTP1,CDC42P1,ITCH-AS1,ITCH-IT1,MIR644A,FDX1P1,TP53INP2,HMGB3P1,MIR499A,MIR499B,RNU6-407P,RNA5SP483,MT1P3,EIF6,FAM83C-AS1,GDF5OS,MIR1289-1,C20orf173,RPL36P4,RPL37P1,RN7SKP271,RNU6-759P,RPF2P1,COX7BP2,HIGD1AP16,RNU4-40P,RNU6-937P,SCAND1,NORAD,HMGB3P2,MYL9,RAB5IF,HNRNPA3P2,RN7SL156P,RPS3AP3,RPS27AP3,HAUS6P2,DEFB121,DEFB122,DEFB123,DEFB124,HM13,HM13-AS1,TPX2,MYLK2,TTLL9,PDRG1,CCM2L,HCK,PLAGL2,POFUT1,KIF3B,NOL4L-DT,COMMD7,MAPRE1,SUN5,BPIFB2,BPIFB3,BPIFB4,BPIFA2,BPIFA4P,BPIFA3,BPIFA1,BPIFB5P,CDK5RAP1,NECAB3,PXMP4,ZNF341,ZNF341-AS1,EIF2S2,AHCY,DYNLRB1,MAP1LC3A,ACSS2,GSS,TRPC4AP,PROCR,FAM83C,GDF5,CEP250,ERGIC3,FER1L4,SPAG4,NFS1,ROMO1,RBM39,CNBD2,AAR2,TGIF2,TGIF2-RAB5IF,SLA2,DSN1,TLDC2,SAMHD1,BCL2L1,DUSP15,XKR7,TM9SF4,ASXL1,C20orf203,DNMT3B,EFCAB8,BPIFB1,SNTA1,E2F1,CHMP4B,RALY,ASIP,ITCH,NCOA6,GGT7,MYH7B,EDEM2,MMP24OS,MMP24,UQCC1,PHF20,EPB41L1,DLGAP4,DLGAP4-AS1,SOGA1,RBL1,NOL4L,PIGU,CPNE1,RBM12,NDRG3,CBFA2T2
Controls
No Control Data Available
No Animal Model Data Available