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20p12.1CNV Type: Deletion-Duplication


Largest CNV size: 602557 bp

Statistics Box:
Number of Reports: 43



Summary Information

Summary statement in development

Additional Locus Information

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References

Major Reports

Title
Author, Year
Report Class
CNV Type
Structural variation of chromosomes in autism spectrum disorder.
Deletion
Functional impact of global rare copy number variation in autism spectrum disorders.
Deletion-Duplication
A genotype resource for postmortem brain samples from the Autism Tissue Program.
Deletion
Multiple recurrent de novo CNVs, including duplications of the 7q11.23 Williams syndrome region, are strongly associated with autism.
Deletion-Duplication
An evidence-based approach to establish the functional and clinical significance of copy number variants in intellectual and developmental disabili...
Deletion-Duplication
Epileptic encephalopathies of the Landau-Kleffner and continuous spike and waves during slow-wave sleep types: genomic dissection makes the link wi...
Deletion-Duplication
Performance of case-control rare copy number variation annotation in classification of autism.
Deletion-Duplication
Excess of rare, inherited truncating mutations in autism.
Deletion-Duplication
Copy number variation in 19 Italian multiplex families with autism spectrum disorder: Importance of synaptic and neurite elongation genes.
Deletion
Paternally inherited cis-regulatory structural variants are associated with autism.
Deletion
Targeted resequencing of 358 candidate genes for autism spectrum disorder in a Chinese cohort reveals diagnostic potential and genotype-phenotype c...
Duplication
NA
Deletion-Duplication
Rare genetic susceptibility variants assessment in autism spectrum disorder: detection rate and practical use.
Deletion-Duplication
NA
Deletion
Cross-Disorder Analysis of Genic and Regulatory Copy Number Variations in Bipolar Disorder
Deletion

Minor Reports

Title
Author, Year
Report Class
CNV Type
Identifying autism loci and genes by tracing recent shared ancestry.
Deletion
Characterization of 11p14-p12 deletion in WAGR syndrome by array CGH for identifying genes contributing to mental retardation and autism.
Deletion
Rare structural variation of synapse and neurotransmission genes in autism.
Deletion-Duplication
Novel copy number variants in children with autism and additional developmental anomalies.
Deletion
Rare de novo and transmitted copy-number variation in autistic spectrum disorders.
Deletion
Relative burden of large CNVs on a range of neurodevelopmental phenotypes.
Deletion
A discovery resource of rare copy number variations in individuals with autism spectrum disorder.
Deletion-Duplication
Refinement and discovery of new hotspots of copy-number variation associated with autism spectrum disorder.
Deletion
Transmission disequilibrium of small CNVs in simplex autism.
Duplication
Both rare and de novo copy number variants are prevalent in agenesis of the corpus callosum but not in cerebellar hypoplasia or polymicrogyria.
Deletion
Identification of risk genes for autism spectrum disorder through copy number variation analysis in Austrian families.
Deletion
Large-scale discovery of novel genetic causes of developmental disorders.
Deletion
The landscape of copy number variations in Finnish families with autism spectrum disorders.
Deletion
RYR2, PTDSS1 and AREG genes are implicated in a Lebanese population-based study of copy number variation in autism.
Deletion
Recurrent copy number variations as risk factors for Autism Spectrum Disorders: analysis of the clinical implications.
Deletion-Duplication
Copy-number variations are enriched for neurodevelopmental genes in children with developmental coordination disorder.
Deletion
Recurrent 15q11.2 BP1-BP2 microdeletions and microduplications in the etiology of neurodevelopmental disorders.
Deletion
Rare Inherited and De Novo CNVs Reveal Complex Contributions to ASD Risk in Multiplex Families.
Duplication
Chromosomal microarray analysis in a cohort of underrepresented population identifies SERINC2 as a novel candidate gene for autism spectrum disorder.
Deletion
NA
Deletion
Comparative Analyses of Copy-Number Variation in Autism Spectrum Disorder and Schizophrenia Reveal Etiological Overlap and Biological Insights.
Deletion
NA
Deletion
De Novo Sequence and Copy Number Variants Are Strongly Associated with Tourette Disorder and Implicate Cell Polarity in Pathogenesis.
Deletion
NA
Deletion
NA
Deletion
NA
Deletion
NA
Duplication
NA
Deletion

Cases

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 annunziata_21_ASD_discovery_cases
  NA NA
 Cases referred between 2008 and 2015 to the Developmental Neurology Unit of the Fondazione IRCCS Istituto Neurologico Carlo Besta (Milan, Italy)
 209
 Cases given a clinical diagnosis of ASD according to DSM-5 criteria and confirmed by ADOS-Generic or ADOS-2 and/or ADI-R
 Range, 2-17 yrs. (Mean, 5 yrs. 8 mos. 3 yrs. 5 mos.)
 80.86% Male
 333892
 1
 0
 1
 bacchelli_20_ASD_discovery_cases
  NA NA
 Individuals with an ASD diagnosis recruited at the IRCCS Stella Maris Foundation (Pisa, Italy)
 128
 Diagnosis of ASD (based on ADI-R, ADOS, other assessments, and/or DSM criteria)
 N/A
 82.81% Male
 235940
 2
 0
 2
 brandler_18_ASD_discovery_cases
 Affected individuals from the Relating Genes with Adolescent and Child Health (REACH) cohort (362 cases from 311 families; 54 multiplex, 243 simplex) and the Simons Simplex 1 (SSC1) cohort (518 cases from simplex quad families)
 880
 REACH cohort: 285 cases diagnosed with ASD, 43 cases diagnosed with PDD-NOS, 10 cases diagnosed with ADHD, and 24 cases presenting with speech delay, epilepsy, anxiety, or other related developmental disorders that were classified as cases for bioinformatics analyses; Simons Simplex Collection 1 (SSC1) cohort: all 518 cases were diagnosed with ASD
 N/A
 N/A
 23296
 1
 0
 1
 chehbani_22_ASD_discovery_cases
  NA NA
 Patients recruited between January and April 2017 at the Child and Adolescent Psychiatry Clinic of the Department of Psychiatry, Fattouma Bourguiba University Hospital (Monastir, Tunisia); 91 patients were from simplex families, and 7 from multiplex families.
 98
 Clinical diagnosis of ASD based on DSM-IV and confirmed by ADI-R and ADOS.
 Range, 3-18 yrs.
 84.69% Male
 147884
 1
 0
 1
 cucinotta_23_ASD_discovery_cases
  NA NA
 Idiopathic ASD patients from 310 families (263 simplex and 47 multiplex) recruited at the Service for Neurodevelopmental Disorders at Campus Bio-Medico University Hospital in Rome (Italy) and at the Interdepartmental Program Autism 090 of the G. Martino University Hospital (Messina, Italy) between the years 2012 and 2019.
 329
 Clinical diagnosis of ASD based on fulfilling DSM-5 criteria and confirmed using ADOS-2 and ADI-R.
 NA
 84.19% Male
 34075
 3
 0
 3
 davis_09_ASD_discovery_cases
 Autistic cases from Autism Genetic Research Exchange (AGRE)
 36
 ASD: diagnosis confirmed through ADI and in some cases ADOS-G. 17 cases with syndromic autism (autism and less than common craniofacial dysmorphology, limb or digit abnormality, or ocular abnormality), 19 cases selected at random with autism and no associated syndromic features
 NA
 NA
 163673
 1
 0
 1
 egger_14_ASD_discovery_cases
 ASD probands from Austria (71 simplex, 2 multiplex) recruited from the catchment area of Styria using three recruitment sites (Institute of Human Genetics, Medical University of Graz, Club Libelle, Center for Autism, Styria, and Children's Hospital, University Hospital Graz).
 73
 Diagnosis of ASD made using ADOS and ADI-R according to DSM-IV or DSM-V categories
 N/A
 80.82% Male
 42000
 1
 0
 1
 engchuan_15_ASD_discovery_cases
 Samples from the Autism Genome Project (AGP)
 1892
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 N/A
 85.78% Male
 594076
 32
 4
 36
 fitzgerald_14_ASD/DD/ID_discovery_cases
 Children recruited through all 24 regional genetics services of the UK National Health Service and Republic of Ireland as part of the Deciphering Developmental Disorders Study
 1133
 Cases affected by severe, undiagnosed developmental disorders; most common phenotypes include developmental delay, intellectual disability, specific learning disability, autism, seizures, microcephaly, and dysmorphic features.
 Median age, 5.5 years
 N/A
 217085
 1
 0
 1
 gai_11_ASD_discovery_cases
 Discovery case samples derived from AGRE set 4 (most recent patient recruitment)
 631
 Idiopathic autism; cases designated as 'spectrum' and 'not quite autism' excluded, as were cases with known genetic syndromes or other non-idiopathic causes
 
 
 610920
 3
 2
 5
 gai_11_ASD_replication_cases
 Replication case samples derived from AGRE sets 1-3
 593
 Idiopathic autism; cases designated as 'spectrum' and 'not quite autism' excluded, as were cases with known genetic syndromes or other non-idiopathic causes
 
 
 111208
 5
 0
 5
 girirajan_11_ASD_discovery_cases
 ASD cases with sporadic autism from the Simons Simplex Collection (SSC)
 336
 Diagnosis of ASD based on meeting criteria on ADOS, ADI-R, and expert clinical judgment. 246 cases with no intellectual disability, 90 cases with intellectual disability. Exclusion criteria: significant hearing, vision, or motor problems; significant birth complications; a diagnosis of ASD-related disorders, such as Fragile X; or having a relative (up to 3rd degree) with ASD or sibling showing ASD-related symptoms.
 
 
 653400
 2
 0
 2
 girirajan_13a_ASD_discovery_cases
 1979 simplex cases from the Simons Simplex Collection (SSC), 579 multiplex cases from AGRE.
 2588
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 NA
 NA
 589000
 2
 0
 2
 gorker_18_ASD_discovery_cases
  NA NA
 Individuals living in the Trakya region of Turkey with a pre-diagnosis of ASD who were referred to the Trakya University Child and Adolescent Psychiatry Department between January 2015-December 2015
 53
 All cases were diagnosed with ASD according to DSM-V and were further assessed using the Childhood Autism Rating Scales (CARS); 14 cases were comorbid with intellectual disability, 16 cases were comorbid with ADHD (assessed by the Conners Parent Rating Scale-Revised Short/CPRS-RS)
 Mean age, 9.2 years
 74.0% Male
 175730
 1
 0
 1
 han_22_ASD/DD/ID_discovery_cases
  NA NA
 Probands with ASD or unexplained developmental delay/intellectual disability with or without other congenital anomalies from Shandong province in Northern China who were referred for genetic services from January 2014 to December 2018.
 410
 151 cases diagnosed with ASD (DSM-5 criteria, ADOS-2, confirmed by CARS score > 30) and 259 patients diagnosed with developmental delay/intellectual disability (DSM-5 criteria, confirmed by Gesell developmental scale DQ score < 75 and Wechsler Intelligence Scale for Children-Revised with IQ<70).
 Mean age, 2 yrs. 11 mos.
 68.78% Male
 173047
 1
 0
 1
 hnoonual_17_ASD_discovery_cases
 Cohort of 114 Thai ASD probands (68 retrospective ASD cases with the use of chromosomal microarray/CMA as a second line test; 46 prospective ASD and developmental delay cases with the use of CMA as the first-tier test)
 114
 68 cases with non-syndromic ASD (61 of which also presented with intellectual disability) were diagnosed with ASD based on meeting DSM-IV criteria for ASD, whereas an additional 46 prospective ASD and DD cases were given a clinical diagnosis of ASD based on DSM-5 criteria.
 Range, 1-18 years (at time of recruitment)
 79.82% Male
 152000
 1
 0
 1
 husson_20_ASD_discovery_cases
 A subset of 679 unrelated subjects diagnosed with ASD or Asperger syndrome recruited from 2009-2017 by clinicians of a local expert center
 253
 Cases diagnosed with ASD or Asperger syndrome according to DSM-IV-TR criteria (evaluations based on ADOS-2, ADI-R, and/or CARS).
 N/A
 81.4% Male
 557914
 1
 2
 3
 kaminsky_11_DD/ID/ASD_discovery_cases
 Cases from the International Standards for Cytogenomic Arrays (ISCA) consortium
 15749
 Unexplained developmental delay, intellectual disability, dysmorphic features, multiple congenital anomalies, autism spectrum disorders, or clinical features suggestive of a chromosomal syndrome
 NA
 NA
 801941
 3
 2
 5
 kanduri_15_ASD_discovery_cases
 Autistic cases from an initial sample of 83 Finnish families comprising 257 family members following quality control
 80
 Diagnosis of ASD based on DSM-IV, 4th edition, or ICD-10 criteria; patients screened based on Childhood Autism Rating Scale (CARS), Asperger Syndrome Screening Questionnaire, and Asperger's Syndrome Diagnostic Interview.
 N/A
 N/A
 111513
 1
 0
 1
 krumm_13_ASD_discovery_cases
 Probands from quad families ascertained as part of the Simons Simplex Collection (SSC); CNVs detected using data from four previously published exome sequencing studies (O'Roak et al., 2011; Iossifov et al., 2012; O'Roak et al., 2012; Sanders et al., 2012)
 411
 Diagnosis of ASD. Social Responsiveness Scale (SRS) used as a quantitative measure of social deficits
 N/A
 81.265% Male
 12475
 0
 1
 1
 krumm_15_ASD_discovery_cases
 Probands from the Simons Simplex Collection
 2377
 Diagnosis of ASD
 N/A
 N/A
 290191
 1
 1
 2
 kushima_18_ASD_discovery_cases
 Individuals predominantly recruited from the middle of Honshu Island (Japan)
 1108
 Cases were diagnosed with ASD according to DSM-5 criteria, with diagnostic and screening instruments (ADI-R, ADOS, ASQ, and SRS) used to evaluate ASD-related behaviors and symptoms in the majority of cases.
 Median age, 19 years
 78.0% Male
 146107
 2
 0
 2
 kushima_18_SCZ_discovery_cases
 Individuals predominantly recruited from the middle of Honshu Island (Japan)
 2458
 Cases were diagnosed with schizophrenia (SCZ) according to DSM-5 criteria.
 Median age, 44 years
 55.0% Male
 219975
 2
 0
 2
 kushima_22_ASD_discovery_cases
 Japanese ASD probands evaluated for copy number variation from an initial cohort of 1,236 probands before quality control.
 1205
 Cases diagnosed with autism spectrum disorder (ASD) according to DSM-5 criteria.
 Median age, 19 yrs.
 77.6% Male
 146108
 2
 0
 2
 kushima_22_BPD_discovery_cases
 Japanese bipolar disorder probands evaluated for copy number variation from an initial cohort of 1,843 probands before quality control.
 1818
 Cases diagnosed with bipolar disorder (BPD) according to DSM-5 criteria.
 Median age, 48 yrs.
 46.7% Male
 341134
 4
 0
 4
 kushima_22_SCZ_discovery_cases
 Japanese schizophrenia probands evaluated for copy number variation from an initial cohort of 3,111 probands before quality control.
 3014
 Cases diagnosed with schizophrenia (SCZ) according to DSM-5 criteria.
 Median age, 45 yrs.
 53.5% Male
 219976
 4
 0
 4
 leppa_16_ASD_discovery_cases
 Children affected with ASD from 1,464 families from the Autism Genetic Resource Exchange (AGRE)
 1764
 Diagnosis according to ADOS and ADI-R
 N/A
 N/A
 600000
 0
 2
 2
 lesca_12_EP_discovery_cases
 Epilepsy patients collected at four French hospitals from 2009: Strasbourg Univ. Hospital (n=40), Lyons Univ. Hospital (n=18), Henri Gastaut Hospital (St. Paul Centre) in Marseille (n=2), and Reims American Memorial Hospital (n=1).
 61
 Epilepsy/epileptic encephalopathy. 41 patients with continuous spike and wave during slow-wave sleep syndrome (CSWSS), 20 patients with Landau-Kleffner syndrome (LKS). 12 (out of 57) patients displayed autistic features; ADHD features (hyperactivity, attention deficit and/or aggressiveness) reported in 41/58 patients,
 Mean age of diagnosis: 5.6 yrs. (range, 1-14 yrs.)
 61% Male
 100000
 1
 1
 2
 levy_11_ASD_discovery_cases
 Autistic probands from 887 families from the Simons Simplex Collection (SSC)
 858
 ASD
 
 87.06% Male
 597386
 1
 0
 1
 lintas_17_ASD_discovery_cases
 ASD cases from 19 Italian ASD multiplex families with either two (N=16) or three (N=3) autistic children
 41
 Cases were assessed with ADOS and ADI-R, Vineland Adaptive Behavior Scales, and either the Wechsler Intelligence Scales for Children (WISC), Griffith Mental Developmental Scales, Colored Raven Matrices, or Leiter International Performance Scale.
 N/A
 87.80% Male
 60416
 2
 0
 2
 maini_18_ASD/DD/ID_discovery_cases
  NA NA
 Patients evaluated at the Clinical Genetics Unit of Arcispedale Santa Maria Nuova, AUSL-IRCCS of Reggio Emilia that were investigated through aCGH between 2005 and 2016
 293
 Cases presented with one or more neurodevelopmental disorders (NDD), multiple congenital anomalies (MCA), and/or dysmorphic features. Most frequent neurodevelopmental diagnoses include language delay (78.5%), intellectual disability (66.4%), motor delay (50.7%), and ASD (13.9%); dysmorphic features were also frequently observed (52.7%)
 Mean age, 7 yrs. (range, 1 mo.-29 yrs.)
 57.5% Male
 640000
 2
 0
 2
 marshall_08_ASD_discovery_cases
 Cohort of ASD families (237 simplex, 189 mulitplex) recruited from the Hospital for Sick Children, McMaster Univ., Memorial Univ., and other sites
 427
 ASD
 
 
 55485
 1
 0
 1
 morrow_08_ASD_discovery_cases
 Affected individuals from 70 families (52 simplex, 18 multiplex) recruited by Homozygosity Mapping Collaborative for Autism (HMCA) used in CNV analysis. This cohort was selected from an original population of affected individuals from 104 families (79 simplex, 25 multiplex; 82.7% male); 88 of these pedigrees have cousin marriages.
 94
 ASD (based on DSM-IV-TR diagnoses when research scales not available in native language)
 
 
 185600
 2
 0
 2
 mosca_16_DCD_discovery_cases
 Participants recruited as part of a multidisciplinary study at the Alberta Children's Hospital (Calgary, Alberta, Canada)
 82
 All cases met diagnostic criteria for developmental coordination disorder (DCD) with or without co-occurring ADHD and/or reading disorder.
 Range, 8-17 years (Mean, 10.06 2.92 yrs.)
 N/A
 22790
 1
 0
 1
 oikonomakis_16_ASD_discovery_cases
 ASD cases evaluated with chromosomal microarray (CMA) from 2008-2015
 195
 Cases assessed for ASD according to DSM-IV behavioral criteria
 Range, 1-38 yrs.
 64.61% Male
 579000
 2
 1
 3
 picinelli_16_ASD/ADHD/DD/ID_discovery_cases
 Patients with 15q11.2 CNVs assessed in the Child and Adolescent Neuropsychiatry Unit of Campus Bio-Medico University Hospital in Rome, Italy, from an original cohort of 243 subjects affected by neurodevelopmental disorders and their first-degree relatives
 6
 Neuropsychiatric diagnosis made according to DSM-IV criteria. Instruments used for data collection were Leiter International Performance Scale-Revised (Leiter-R), Wechsler Intelligence Scale for Children-3rd Revision (WISC III), Wechsler Adult Intelligence Scale-3rd edition (WAIS-III), Autism Diagnostic Observation Schedule (ADOS), Autism and Asperger Diagnostic Scale-Revised (RAADS-R), Autism Diagnostic Interview-Revised (ADI-R), Vineland Adaptive Behavior Scales (VABS), and the Child Behavior Checklist (CBCL/6-18)
 Range, 8-19 yrs.
 83.33% Male
 285145
 1
 0
 1
 pinto_10_ASD_discovery_cases
 Autism Genome Project (AGP) consortium patient cohort from families with at least two ASD individuals
 996
 ASD (ADI-R and ADOS): strict, broad, or spectrum ASD
 
 
 403052
 8
 1
 9
 prasad_12_ASD_discovery_cases
 Unrelated ASD cases recruited from three Canadian sites (Hospital for Sick Children, McMaster University, and Memorial University of Newfoundland); the majority of cases had been previously genotyped with results published in Marshall et al., 2008 and Pinto et al., 2010. 20 cases from initial cohort of 696 were excluded from further analysis (due to CNVs > 5 Mb).
 676
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS
 NA
 82.84% Male
 79297
 2
 2
 4
 sajan_13_ACC/CBLH/PMG_discovery_cases
 Individuals with severe congenital brain malformations [agenesis of the corpus callosum (ACC), cerebellar hypoplasia (CBLH), and/or polymicrogyria (PMG)] and additional neurodevelopmental phenotypes
 487
 Diagnosis of agenesis of the corpus callosum (ACC), cerebellar hypoplasia (CBLH), and/or polymicrogyria (PMG); additional diagnoses of autism spectrum disorder (ASD), developmental delay (DD), intellectual disability (ID) and/or seizures in some patients
 N/A
 N/A
 196833
 3
 0
 3
 sanders_11_ASD_discovery_cases
 Autistic probands from the Simons Simplex Collection (SSC). 872 probands in quartet families, 272 probands in trios.
 1124
 ASD diagnosis: 89.5% autism; 8.5% PDD-NOS, 2% Asperger syndrome. Mean full-scale IQ 85.1 1.5 (mean verbal IQ, 81.9 1.7; mean non-verbal IQ, 88.4 1.4)
 Mean, 9.1 yrs.
 86.1% Male
 602557
 73
 3
 76
 soueid_16_ASD_discovery_cases
 Autistic children; 37/41 from 35 fully analyzed families (33 simplex, 2 multiplex)
 41
 All cases fulfilled DSM-V criteria for autism
 Range, 3-18 yrs.
 92.68% Male
 306000
 1
 0
 1
 soueid_16_DD/ID_discovery_cases
 Individuals referred to clinical neurogenetics service with non-syndromic developmental delay and intellectual disabilities (DD/ID) or rare neurological syndromes
 35
 Cases present with non-syndromic developmental delay and intellectual disabilities (DD/ID) or rare neurological syndromes
 N/A
 N/A
 0
 0
 0
 0
 streata_22_ASD/DD/ID_discovery_cases
  NA NA
 Patients evaluated for global developmental delay and/or intellectual disability in pediatric, child neurology, or medical genetics departments throughout Romania who were referred to the Regional Centre for Medical Genetics for genetic testing between 2015 and 2022.
 371
 All cases presented with global developmental delay (DD) and/or intellectual disability (ID); a subset of cases also presented with autism spectrum disorder (ASD).
 Range, 6 mos.-40 yrs. (median age, 5.5 yrs.)
 63.07% Male
 1340914
 0
 1
 1
 wang_18_TS_replication_cases
 Probands from 120 trio families not previously screened by whole-exome sequencing in the discovery cohort
 120
 Probands diagnosed with Tourette syndrome
 N/A
 N/A
 179514
 1
 0
 1
 wintle_10_ASD_discovery_cases
 Autism Tissue Program: postmortem brain tissue from Harvard Brain Tissue Resource Center (HBTRC)
 34
 26 subjects with confirmed or suspected autism, 4 subjects with confirmed autism and 15q duplication, 2 subjects with epilepsy, 1 subject with 15q duplication, & 1 subject with Angelman syndrome
 Mean, 25.97 18.93
 73.53% Male
 9000
 1
 0
 1
 xu_08_WAGR/ASD/DD/ID_discovery_cases
 Patients with WAGR syndrome and de novo deletions in the 11p14-p12 region previously detected by FISH
 31
 All 31 patients diagnosed with WAGR syndrome; neurodevelopmental comorbidities within this cohort include intellectual disability, developmental delay, autism, ADHD, seizures, anxiety, obsessive-compulsive behaviors, and speech delay/speech disorder
 Range, 3-46 yrs.
 45.16% Male
 184200
 1
 0
 1
 zarrei_19_ASD/ADHD/OCD/SCZ_discovery_cases
  NA NA
 Samples with neurodevelopmental disorders (NDDs) mostly from the province of Ontario, Canada
 2691
 1,838 cases diagnosed with ASD, 427 with ADHD, 204 with schizophrenia, and 222 with OCD
 
 76.37% Male
 237258
 2
 1
 3
 zhou_19_ASD_discovery_cases
 ASD probands from families recruited from training centers in Beijing and Tsingdao, China
 539
 Cases were diagnosed for ASD by ADI-R and ADOS
 4.92 1.20 years
 87.38% Male
 60000
 0
 1
 1

Controls

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 bacchelli_20_ASD_discovery_controls
  NA NA
 Anonymized DNA samples from Italian individuals with no psychiatric disorders
 365
 Control
 N/A
 54.52% Male
 150754
 4
 1
 5
 engchuan_15_ASD_discovery_controls
 Platform-matched controls from three large studies: SAGE (Study of Addiction Genetics and Environment), Ontario Colorectal Cancer study, and HABC (Health Aging and Body Composition)
 2342
 Controls; subjects had no previous psychiatric history
 N/A
 46.67% Male
 430296
 37
 4
 41
 girirajan_11_ASD_discovery_controls
 Control individuals ascertained by NIMH Genetics Initiative. DNA samples from these individuals were obtained from the Rutgers Univ. Cell & DNA Repository.
 337
 Control. Individuals screened specifically for eight mental health disorders.
 
 
 653400
 0
 0
 0
 kaminsky_11_DD/ID/ASD_discovery_controls
 Controls from the International Standards for Cytogenomic Arrays (ISCA) consortium
 10118
 Controls
 NA
 NA
 NA
 NA
 NA
 NA
 kanduri_15_ASD_discovery_controls
 Unrelated Finnish samples from the cohort of Health 2000 survey from an initial sample of 288 individuals following quality control
 269
 Controls screened for DSM-IV mental disorders using the Composite International Diagnostic Interview and psychotic disorders using the research version of the Structured Clinical Interview for DSM-IV
 N/A
 N/A
 196980
 3
 0
 3
 krumm_13_ASD_discovery_controls
 Unaffected siblings of ASD probands from quad families ascertained as part of the Simons Simplex Collection (SSC); CNVs detected using data from four previously published exome sequencing studies (O'Roak et al., 2011; Iossifov et al., 2012; O'Roak et al., 2012; Sanders et al., 2012)
 411
 Control (unaffected siblings of ASD probands). Social Responsiveness Scale (SRS) used as a quantitative measure of social deficits
 N/A
 46.47% Male
 10993
 0
 1
 1
 krumm_15_ASD_discovery_controls
 Unaffected siblings from quad families from the Simons Simplex Collection
 1786
 Control
 N/A
 N/A
 10993
 0
 2
 2
 kushima_18_ASD/SCZ_discovery_controls
 Individuals selected from the general population and predominantly recruited from the middle of Honshu Island (Japan)
 2095
 Controls had no history of mental disorders based upon responses to questionnaires or self-reporting.
 Median age, 37 years
 52.0% Male
 0
 0
 0
 0
 kushima_22_ASD/BPD/SCZ_discovery_controls
 Psychiatrically normal control individuals selected from the general population evaluated for copy number variation from an initial cohort of 2,713 control individuals before quality control.
 2671
 Controls were psychiatrically normal and had no history of mental disorders based on responses to questionnaires or self-reporting.
 Median age, 36 yrs.
 47.8% Male
 249679
 1
 0
 1
 levy_11_ASD_discovery_controls
 Unaffected siblings of autistic probands from 887 families from the Simons Simplex Collection (SSC)
 863
 Control
 
 47.97% Male
 425267
 1
 0
 1
 marshall_08_ASD_discovery_controls_1
 German PopGen project and entries from Database of Genomic Variants
 500
 Controls
 
 
 0
 0
 0
 0
 marshall_08_ASD_discovery_controls_2
 Non-disease controls from Ontario population
 1152
 Controls
 
 
 0
 0
 0
 0
 nord_11_ASD_discovery_controls
 Samples from 367 total control individuals (319 European American, 48 African American) used to test for differences in rare CNV prevalence compared with autism cases
 123
 Controls (no history of psychiatric symptoms by self-report)
 30 yrs.
 
 112036
 0
 1
 1
 prasad_12_ASD_discovery_controls
 PDx controls [1000 DNA samples from reportedly healthy donors (50.2% male) from BioServe (Beltsville, MD)] and 4139 in-house controls previously reported in Krawcak et al. 2006, Stewart et al. 2009, and Bierut et al. 2010. CNVs identified in controls were used to define rare ASD-specific CNVs.
 5139
 Control
 NA
 NA (PDx controls 50.2% male)
 79297
 0
 0
 0
 sanders_11_ASD_discovery_controls
 Matched siblings of autistic probands from the Simons Simplex Collection (SSC).
 872
 Controls
 Mean, 10.0 yrs.
 
 349312
 42
 4
 46
 soueid_16_ASD_discovery_controls
 Control cohort of normal participants
 37
 Control
 N/A
 51.35% Male
 306000
 1
 0
 1
 wintle_10_ASD_discovery_controls_2
 Control samples from POPGEN (n=1123) & Ottawa Heart Institute (n=1234); used for identification of rare CNVs in Affymetrix data
 2357
 Controls
 
 51.3% Male
 9000
 0
 0
 0
 zhou_19_ASD_discovery_controls
 Samples from blood donors at donation stations in Beijing, China (note: CNVs identified in controls not reported in this study)
 512
 Controls were screened for ASD by AQ measurement (score < 32) and self-reported to be negative for personal or family history of neurological disorders or psychiatric illness related to ASD and adverse pregnancy history
 29.77 9.12 years
 76.17% Male
 N/A
 N/A
 N/A
 N/A

Cases

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
 annunziata_21_ASD_discovery_cases
  Italy
 aCGH
  BlueGnome ISCA180K (Agilent)
 
 BlueGnome Bluefuse
 qPCR, FISH
 bacchelli_20_ASD_discovery_cases
  Italian
 Solid phase hybridization
  Illumina Infinium PsychArray
 PennCNV, QuantiSNP, CNVPartition
 
 None
 brandler_18_ASD_discovery_cases
  N/A
 WGS
  Illumina HiSeq X10 or HiSeq 2500
 ForestSV, Lumpy, Manta, Mobster, SV2
 
 PCR, array SNP
 chehbani_22_ASD_discovery_cases
  Tunisia
 aCGH
  Agilent SurePrint G3
 ADM-2
 Agilent Cytogenomic v.4.0.3.12.
 None
 cucinotta_23_ASD_discovery_cases
  Italy
 aCGH
  Agilent SurePrint 4180K
 ADM-2
 Agilent Feature Extraction v.10.7., Agilent Cytogenomic Software v.4.0.3.12.
 None
 davis_09_ASD_discovery_cases
  NA
 Array SNP
  Affymetrix 250K Nsp, Affymetrix 250K Syt
 HMM
 CNAG v2.0
 None
 egger_14_ASD_discovery_cases
  68 European, 2 Asian, 1 African, 1 Turkish, 1 Egyptian
 Array SNP
  Affymetrix 6.0
 Birdsuite, iPattern, Affymetrix Genotyping Console
 
 None
 engchuan_15_ASD_discovery_cases
  Caucasian
 Solid phase hybridization
  Illumina 1M
 
 
 Yes
 fitzgerald_14_ASD/DD/ID_discovery_cases
  UK and Ireland
 aCGH, WES
  Agilent 2x1M, Agilent Exome+
 
 Cnsolidate, CoNVex
 None
 gai_11_ASD_discovery_cases
  European
 Solid phase hybridization
  Illumina Infinium II HumanHap550 BeadChip
 
 BeadStudio 3.0
 None
 gai_11_ASD_replication_cases
  European
 Solid phase hybridization
  Illumina Infinium II HumanHap550 BeadChip
 
 BeadStudio 3.0
 None
 girirajan_11_ASD_discovery_cases
 
 aCGH
  Custom microarray targeting 107 genomic hotspot regions (Roche NimbleGen Hotspot v1.0 array; 12 x 135K)
 HMM
 
 None
 girirajan_13a_ASD_discovery_cases
  NA
 aCGH
  Custom microarray with a high density of probes targeted to 1,367 regions with a susceptible genomic architecture
 ADM-2
 Agilent Genomic Workbench
 None
 gorker_18_ASD_discovery_cases
  Turkish
 aCGH
  Agilent SurePrint G3 8x60K
 N/A
 Agilent Feature Extraction v.12.0.1.1, Agilent Cytogenomics v.2.9.2.4
 None
 han_22_ASD/DD/ID_discovery_cases
  Han Chinese
 Array SNP
  Affymetrix SNP 6.0, Affymetrix CytoScan HD
 
 
 
 hnoonual_17_ASD_discovery_cases
  Thai
 Solid phase hybridization
  Illumina Infinium CytoSNP-850K v1.1 BeadChip
 
 BlueFuse Multi v4.3, GenomeStudio Data Analysis v.2011.1
 None
 husson_20_ASD_discovery_cases
  France
 WES
  Illumina HiSeq4000
 
 CANOES
 ddPCR, QMPSF, aCGH
 kaminsky_11_DD/ID/ASD_discovery_cases
  NA
 aCGH
  Agilent 44K, Agilent 105K
 
 Feature Extraction, DNA Analytics
 FISH, qPCR, MLPA, aCGH, standard G-banded chromosome analysis
 kanduri_15_ASD_discovery_cases
  Finnish
 Solid phase hybridization
  Illumina Human OmniExpress-12v1.0 BeadChip
 QuantiSNP, PennCNV
 Illumina BeadStudio
 None
 krumm_13_ASD_discovery_cases
  N/A
 WES
  Whole exome sequencing platforms used in four recent publications (O'Roak et al., 2011; Sanders et al., 2012; O'Roak et al., 2012, and Iossifov et al., 2012)
 DNACopy, CGHCall
 CoNIFER
 None
 krumm_15_ASD_discovery_cases
  N/A
 WES
 
 CoNIFER, XHMM
 
 Solid phase hybridization (Illumina 1M, 1 M Duo, or Omni 2.5)
 kushima_18_ASD_discovery_cases
  Japanese
 aCGH
  NimbleGen 720K, Agilent 400K
 FASST2
 Nexus Copy Number v.9.0
 N/A
 kushima_18_SCZ_discovery_cases
  Japanese
 aCGH
  NimbleGen 720K, Agilent 400K
 FASST2
 Nexus Copy Number v.9.0
 N/A
 kushima_22_ASD_discovery_cases
  Japan
 aCGH
  NimbleGen 720K Whole-Genome Tiling, Agilent SurePrint G3 Human CGH 400K
 Fast Adaptive States Segmentation Technique 2
 BioDiscovery Nexus Copy Number v.9.0
 qRT-PCR
 kushima_22_BPD_discovery_cases
  Japan
 aCGH
  Agilent SurePrint G3 Human CGH 400K
 Fast Adaptive States Segmentation Technique 2
 BioDiscovery Nexus Copy Number v.9.0
 qRT-PCR
 kushima_22_SCZ_discovery_cases
  Japan
 aCGH
  NimbleGen 720K Whole-Genome Tiling, Agilent SurePrint G3 Human CGH 400K
 Fast Adaptive States Segmentation Technique 2
 BioDiscovery Nexus Copy Number v.9.0
 qRT-PCR
 leppa_16_ASD_discovery_cases
  N/A
 Solid phase hybridization
  Illumina 550v1 and 550v3, Omni-1.0-B and -H, Omni 2.5
 PennCNV, QuantiSNP, GNOSIS
 GenomeStudio, CNVision
 None
 lesca_12_EP_discovery_cases
  France
 aCGH
  Agilent SurePrint G3 Human CGH Microarray 4x180K
 ADM-2
 Agilent Feature Extraction v10.7.3.1, Agilent Genomic WORKBENCH v5.0.14
 qPCR
 levy_11_ASD_discovery_cases
 
 aCGH
  NimbleGen HD2
 HMM
 
 
 lintas_17_ASD_discovery_cases
  Italy
 aCGH
  Agilent Human Genome CGH SurePrint G3 4x180K
 ADM-2
 Agilent Feature Extraction v10.7, Agilent Cytogenomic Software v2.9
 Validation by visual inspection, RT-PCR, or PCR
 maini_18_ASD/DD/ID_discovery_cases
  Italian
 aCGH, array SNP
  Multiple platforms, including Agilent and Affymetrix arrays (8x60K oligochips since 2012)
 
 
 None
 marshall_08_ASD_discovery_cases
  90% European, 4.5% European-mixed, 4.5% Asian, 0.07% African
 Array SNP, karotyping
  Affymetrix 500K
 dChip, CNAG, GEMCA
 
 qPCR, qmPCR
 morrow_08_ASD_discovery_cases
  Arabic Middle East, Turkey, and Pakistan
 Array SNP
  Affymetrix 500K
 BRLMM
 dChip
 
 mosca_16_DCD_discovery_cases
  Canada
 Solid phase hybridization
  Illumina HumanOmni2.5-Quad BeadChip
 iPattern, PennCNV, QuantiSNP, CNVPartition
 
 None
 oikonomakis_16_ASD_discovery_cases
  Greece
 aCGH
  Agilent 244K, 4x180K, or 4x180K (SurePrint G3 arrays)
 
 
 None
 picinelli_16_ASD/ADHD/DD/ID_discovery_cases
  Italy
 aCGH
  Agilent SurePrint G3 4x180K
 ADM-2
 Agilent Cytogenomic Software v2.7
 None
 pinto_10_ASD_discovery_cases
  European
 Solid phase hybridization
  Illumina Infinium 1M SNP microarray
 QuantiSNP, iPattern
 
 qPCR, long-range PCR (LR-PCR), MLPA, FISH, aCGH (Agilent 1M), array SNP (Affymetrix 500K)
 prasad_12_ASD_discovery_cases
  Canada
 aCGH
  Agilent 1M
 ADM-2, DNAcopy (R Bioconductor)
 DNA Analytics v4.0.85 (Agilent), DNAcopy
 None
 sajan_13_ACC/CBLH/PMG_discovery_cases
  81.31% Caucasian
 Solid phase hybridization
  Illumina InfiniumII HumanHap610
 PennCNV
 
 None (not tested or failure to confirm by qPCR)
 sanders_11_ASD_discovery_cases
  White non-Hispanic, 74.5%; mixed, 9.3%, Asian, 4.3%, White Hispanic, 4.0%, African-American, 3.8%; other, 4.2&
 Solid phase hybridization
  Illumina 1M v1, Illumina 1M v3
 PennCNV, QuantiSNP, GNOSIS
 
 qPCR
 soueid_16_ASD_discovery_cases
  Lebanon
 Array SNP
  Affymetrix 2.7M, Affymetrix CytoScan
 
 Affymetrix ChAS
 None
 soueid_16_DD/ID_discovery_cases
  Lebanon
 Array SNP
  Affymetrix 2.7M, Affymetrix CytoScan
 
 Affymetrix ChAS
 None
 streata_22_ASD/DD/ID_discovery_cases
  Romania
 aCGH
  Agilent SurePrint G3 ISCA v.2 8x60K, Agilent 4x180K, OGT CytoSure ISCA v.2 8x60K
 NA
 Agilent CytoGenomics, OGT CytoSure Interpret
 None
 wang_18_TS_replication_cases
  N/A
 Exome Array
  Illumina HumanOmniExpressExome-8 v.1
 PennCNV
 Illumina GenomeStudio, PennCNV
 None
 wintle_10_ASD_discovery_cases
  31 European, 2 East Asian, 1 African
 Array SNP, solid phase hybridization
  Affymetrix 6.0, Illumina Human 1M-duo
 PennCNV, Birdsuite, iPattern
 QuantiSNP, Affymetrix Genotyping Console
 Solid phase hybridization
 xu_08_WAGR/ASD/DD/ID_discovery_cases
  N/A
 aCGH
  Agilent 4x44K, custom Agilent array
 
 
 None
 zarrei_19_ASD/ADHD/OCD/SCZ_discovery_cases
  74.1% European
 Array SNP
  Affymetrix CytoScan HD
 
 Affymetrix ChAS, iPattern, BioDiscovery Nexus, Partek Genomics Suite
 RT-qPCR or WGS
 zhou_19_ASD_discovery_cases
  Han Chinese
 Targeted exome sequencing
  Roche NimbleGen SeqCap EZ Library, Illumina HiSeq 2500
 
 XHMM v.1.0
 qPCR

Controls

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
  bacchelli_20_ASD_discovery_controls
  Italian
  Solid phase hybridization
  Illumina Infinium PsychArray
  PennCNV, QuantiSNP, CNVPartition
 
  None
  engchuan_15_ASD_discovery_controls
  Caucasian
  Solid phase hybridization
  Illumina 1M
 
 
  None
  girirajan_11_ASD_discovery_controls
 
  aCGH
  Custom microarray targeting 107 genomic hotspot regions (Roche NimbleGen Hotspot v1.0 array; 12 x 135K)
  HMM
 
 
  kaminsky_11_DD/ID/ASD_discovery_controls
  NA
  aCGH
  Agilent 44K, Agilent 105K
 
  Feature Extraction, DNA Analytics
 
  kanduri_15_ASD_discovery_controls
  Finnish
  Solid phase hybridization
  Illumina Infinium HD Human610-Quad BeadChip
  QuantiSNP, PennCNV
  Illumina BeadStudio
  None
  krumm_13_ASD_discovery_controls
  N/A
  WES
  Whole exome sequencing platforms used in four recent publications (O'Roak et al., 2011; Sanders et al., 2012; O'Roak et al., 2012, and Iossifov et al., 2012)
  DNACopy, CGHCall
  CoNIFER
  None
  krumm_15_ASD_discovery_controls
  N/A
  WES
 
  CoNIFER, XHMM
 
  Solid phase hybridization (Illumina 1M, 1 M Duo, or Omni 2.5)
  kushima_18_ASD/SCZ_discovery_controls
  Japanese
  aCGH
  NimbleGen 720K, Agilent 400K
  FASST2
  Nexus Copy Number v.9.0
  N/A
  kushima_22_ASD/BPD/SCZ_discovery_controls
  Japan
  aCGH
  NimbleGen 720K Whole-Genome Tiling, Agilent SurePrint G3 Human CGH 400K
  Fast Adaptive States Segmentation Technique 2
  BioDiscovery Nexus Copy Number v.9.0
  qRT-PCR
  levy_11_ASD_discovery_controls
 
  aCGH
  NimbleGen HD2
  HMM
 
 
  marshall_08_ASD_discovery_controls_1
  European
  Array SNP, karotyping
  Affymetrix 500K
  dChip, CNAG, GEMCA
 
 
  marshall_08_ASD_discovery_controls_2
  European
  Array SNP, karotyping
  Affymetrix 500K
  dChip, CNAG, GEMCA
 
 
  nord_11_ASD_discovery_controls
 
  aCGH
  NimbleGen HD2
  Sliding-window algorithm, ~10 kb minumum size threshold
 
  None
  prasad_12_ASD_discovery_controls
  NA
  aCGH
  Agilent 1M
  ADM-2, DNAcopy (R Bioconductor)
  DNA Analytics v4.0.85 (Agilent), DNAcopy
 
  sanders_11_ASD_discovery_controls
 
  Solid phase hybridization
  Illumina 1M v1 or Illumina 1M v3
  PennCNV, QuantiSNP, GNOSIS
 
 
  soueid_16_ASD_discovery_controls
  Lebanon
  Array SNP
  Affymetrix 2.7M, Affymetrix CytoScan
 
  Affymetrix ChAS
  None
  wintle_10_ASD_discovery_controls_2
  99% European
  N/A
  N/A
  N/A
  N/A
 
  zhou_19_ASD_discovery_controls
  Han Chinese
  Targeted exome sequencing
  Roche NimbleGen SeqCap EZ Library, Illumina HiSeq 2500
 
  XHMM v.1.0
 

Cases

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  annunziata_21_ASD_discovery_cases-caseIB210
  NA NA
 NA
 M
 ASD
 Case diagnosed with ASD; no additional clinical information available.
 Cognitive profile NA
 14124760
 14458651
  333892
 GRCh38
 Deletion
 Yes
  bacchelli_20_ASD_discovery_cases-caseAB114
  NA NA
 N/A
 M
 ASD
 Diagnosis of ASD (based on ADI-R, ADOS, other assessments, and/or DSM criteria)
 
 15036594
 15107939
  71346
 GRCh38
 Deletion
 No
  bacchelli_20_ASD_discovery_cases-caseAB81
  NA NA
 N/A
 M
 ASD
 Clinical diagnosis of high-functioning PDD. PDD on ADOS; mild receptive language disorder
 Normal IQ on WPPSI (TIQ108)
 15048316
 15284255
  235940
 GRCh38
 Deletion
 No
  brandler_18_ASD_discovery_cases-caseSSC08218
 N/A
 M
 ASD
 Case from SSC cohort
 
 15021112
 15044408
  23297
 GRCh38
 Deletion
 Yes
  chehbani_22_ASD_discovery_cases-case18
  NA NA
 NA
 M
 ASD and intellectual disability
 Case diagnosed with ASD based on DSM-IV criteria and confirmed by ADI-R and ADOS-2.
 Intellectual disability.
 14843725
 14991608
  147884
 GRCh38
 Deletion
 No
  cucinotta_23_ASD_discovery_cases-case284
  NA NA
 NA
 NA
 ASD
 Clinical diagnosis of ASD based on fulfilling DSM-5 criteria and confirmed using ADOS-2 and ADI-R.
 
 14818451
 14843785
  25335
 GRCh38
 Deletion
 No
  cucinotta_23_ASD_discovery_cases-case352
  NA NA
 NA
 NA
 ASD
 Clinical diagnosis of ASD based on fulfilling DSM-5 criteria and confirmed using ADOS-2 and ADI-R.
 
 14818451
 14843785
  25335
 GRCh38
 Deletion
 No
  cucinotta_23_ASD_discovery_cases-case431
  NA NA
 NA
 NA
 ASD
 Clinical diagnosis of ASD based on fulfilling DSM-5 criteria and confirmed using ADOS-2 and ADI-R.
 
 14794266
 14828340
  34075
 GRCh38
 Deletion
 No
  davis_09_ASD_discovery_cases-AU001505
 NA
 NA
 Non-syndromic ASD
 Diagnosis: autism. Non-syndromic autism (no craniofacial dysmorphology, limb or digit malformation, or ocular abnormality).
 
 14863051
 15026724
  163673
 Unknown
 Deletion
 No
  egger_14_ASD_discovery_cases-caseA70
 N/A
 N/A
 ASD
 Clinical profile N/A.
 
 14801038
 14843259
  42222
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14107_1890
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14749245
 14925213
  175969
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14197_3210
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14903655
 14933932
  30278
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14225_3590
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14704701
 14891667
  186967
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14259_3820
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14882326
 15001313
  118988
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14299_4200
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14742363
 15001313
  258951
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14379_4920
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14757197
 14960041
  202845
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case16053_1571164001
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14669711
 14874289
  204579
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case16097_1571153001
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14357847
 14444691
  86845
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case17035_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14944629
 15155292
  210664
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case18158_301
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14568030
 14618543
  50514
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case1951_301
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 16708128
 17302204
  594077
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case20003_1019001
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14620231
 14903655
  283425
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case20057_1290002
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14759193
 14836807
  77615
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case3194_4
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14762184
 14826953
  64770
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case3425_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14899681
 14960041
  60361
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case3473_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14784494
 14960041
  175548
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case3541_2
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14886776
 14950848
  64073
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4017_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14716236
 14792143
  75908
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4043_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 12822046
 12909558
  87513
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case4142_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14841483
 14885972
  44490
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4157_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14690429
 14742363
  51935
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4239_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14835132
 15190312
  355181
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4242_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14697142
 14784494
  87353
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4427_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14777465
 15096384
  318920
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4440_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 12822046
 12909558
  87513
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case4441_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14783965
 14930357
  146393
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case5061_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14891667
 14950848
  59182
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case5244_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14849807
 14960041
  110235
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case5335_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14617088
 15020139
  403052
 GRCh38
 Deletion
 Yes
  engchuan_15_ASD_discovery_cases-case5368_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14868013
 15001313
  133301
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case5523_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 13102471
 13149449
  46979
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case6023_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 15020139
 15232647
  212509
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case6375_6
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14716236
 14763259
  47024
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case6416_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14742363
 14861740
  119378
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case8438_202
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14697142
 14784494
  87353
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case9610_201
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 14891667
 14950848
  59182
 GRCh38
 Deletion
 No
  fitzgerald_14_ASD/DD/ID_discovery_cases-case000019
 N/A
 N/A
 N/A
 Clinical profile N/A; CNV from Supplementary Table S25
 N/A
 14771956
 14989041
  217086
 GRCh38
 Deletion
 No
  gai_11_ASD_discovery_cases-AU1143301
 
 
 Autism
 
 
 16616603
 17227522
  610920
 Unknown
 Duplication
 No
  gai_11_ASD_discovery_cases-AU1158301
 
 
 Autism
 
 
 16643386
 17227522
  584137
 Unknown
 Duplication
 No
  gai_11_ASD_discovery_cases-AU1257301
 
 
 Autism
 
 
 14729684
 14785965
  56282
 Unknown
 Deletion
 No
  gai_11_ASD_discovery_cases-AU1830302
 
 
 Autism
 
 
 14985615
 15019428
  33814
 Unknown
 Deletion
 No
  gai_11_ASD_discovery_cases-AU1830303
 
 
 Autism
 
 
 14985615
 15019428
  33814
 Unknown
 Deletion
 No
  gai_11_ASD_replication_cases-AU001505
 
 
 Autism
 
 
 14913823
 15025030
  111208
 Unknown
 Deletion
 No
  gai_11_ASD_replication_cases-AU008504
 
 
 Autism
 
 
 14654616
 14712611
  57996
 Unknown
 Deletion
 No
  gai_11_ASD_replication_cases-AU008505
 
 
 Autism
 
 
 14645386
 14712611
  67226
 Unknown
 Deletion
 No
  gai_11_ASD_replication_cases-AU0934303
 
 
 Autism
 
 
 14725701
 14815422
  89722
 Unknown
 Deletion
 No
  gai_11_ASD_replication_cases-AU0934304
 
 
 Autism
 
 
 14725701
 14815422
  89722
 Unknown
 Deletion
 No
  girirajan_11_ASD_discovery_cases-Si20
 12
 M
 Autism
 ADOS score: 7. Vineland composite score: 68.
 No mental retardation/intellectual disability. Full-scale IQ, 109; Verbal IQ, 123; Non-verbal IQ, 101.
 12729336
 13382736
  653401
 GRCh38
 Deletion
 No
  girirajan_11_ASD_discovery_cases-Si227
 7
 M
 Autism
 ADOS score: 8. Vineland composite score: 63.
 Moderate mental retardation/intellectual disability. Full-scale IQ, 46; Verbal IQ, 38; Non-verbal IQ, 57.
 14894913
 15196817
  301905
 GRCh38
 Deletion
 No
  girirajan_13a_ASD_discovery_cases-11986.p1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 N/A
 12761353
 13351353
  590001
 GRCh38
 Deletion
 No
  girirajan_13a_ASD_discovery_cases-13624.p1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 N/A
 14651354
 15061354
  410001
 GRCh38
 Deletion
 No
  gorker_18_ASD_discovery_cases-case29
  NA NA
 8 yrs.
 M
 ASD, ADHD
 ASD and ADHD
 
 14719394
 14895124
  175731
 GRCh38
 Deletion
 No
  han_22_ASD/DD/ID_discovery_cases-case16D1738
  NA NA
 4 mos. 24 days
 M
 Developmental delay
 
 
 14537717
 14710763
  173047
 GRCh38
 Deletion
 No
  hnoonual_17_ASD_discovery_cases-caseRA39
 N/A
 M
 ASD and intellectual disability
 No additional clinical features
 Intellectual disability
 14581381
 14733811
  152431
 GRCh38
 Deletion
 No
  husson_20_ASD_discovery_cases-case412
 13 yrs.
 M
 ASD
 Diagnosis of Asperger syndrome
 
 13528383
 14086296
  557914
 GRCh38
 Triplication
 Yes
  husson_20_ASD_discovery_cases-case46
 12 yrs.
 M
 ASD
 Diagnosis of Asperger syndrome
 
 14684810
 14684988
  179
 GRCh38
 Deletion
 Yes
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00000982
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 14453727
 14818511
  364785
 GRCh38
 Deletion
 Yes
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00002672
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 13599877
 13834151
  234275
 GRCh38
 Duplication
 Yes
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00003772
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 12776078
 13349316
  573239
 GRCh38
 Deletion
 Yes
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00004822
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 14117134
 14307669
  190536
 GRCh38
 Deletion
 Yes
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00005299
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 13651844
 14453786
  801943
 GRCh38
 Duplication
 Yes
  kanduri_15_ASD_discovery_cases-case3073
 N/A
 N/A
 ASD
 Diagnosis of ASD based on DSM-IV, 4th edition, or ICD-10 criteria; patient screened based on Childhood Autism Rating Scale (CARS), Asperger Syndrome Screening Questionnaire, and/or Asperger's Syndrome Diagnostic Interview.
 
 14772789
 14884301
  111513
 Unknown
 Deletion
 No
  krumm_13_ASD_discovery_cases-case13418.p1
 N/A
 M
 ASD
 ASD proband from SSC quad family 13418. SRS score of 61.
 Full-scale IQ (FSIQ) score of 135.
 13876037
 13888512
  12476
 GRCh38
 Duplication
 No (not tested)
  krumm_15_ASD_discovery_cases-case11986.p1
 N/A
 Male
 ASD
 Proband from the Simons Simplex Collection (SSC). Family type: Quad
 
 13009267
 13299459
  290193
 GRCh38
 Deletion
 Yes
  krumm_15_ASD_discovery_cases-case13418.p1
 N/A
 Male
 ASD
 Proband from the Simons Simplex Collection (SSC). Family type: Quad
 
 13876037
 13888512
  12476
 GRCh38
 Duplication
 Yes
  kushima_18_ASD_discovery_cases-caseASD0172
 22 yrs.
 M
 ASD, ADHD, ID, epilepsy/seizures
 Behavioral/psychiatric evaluation: ADHD. Epilepsy/seizures: positive for epileptic seizures/epilepsy. Family history: negative.
 Intellectual disability (IQ < 70)
 14490624
 14573076
  82453
 GRCh38
 Deletion
 N/A
  kushima_18_ASD_discovery_cases-caseASD0391
 10 yrs.
 M
 ASD, ADHD
 Developmental milestones: motor delay. Motor and musculoskeletal evaluation: motor coordination deficits, motor tics. Behavioral/psychiatric evaluation: ADHD, tic disorders. Family history: negative.
 IQ > 70
 15307783
 15453889
  146107
 GRCh38
 Deletion
 N/A
  kushima_18_SCZ_discovery_cases-caseSCZ0052
 31 yrs.
 F
 Schizophrenia
 No additional clinical information reported for this individual. Family history: unknown.
 
 14656734
 14876708
  219975
 GRCh38
 Deletion
 N/A
  kushima_18_SCZ_discovery_cases-caseSCZ2312
 67 yrs.
 F
 Schizophrenia
 No additional clinical information reported for this individual. Family history: unknown.
 
 14631584
 14707775
  76192
 GRCh38
 Deletion
 N/A
  kushima_22_ASD_discovery_cases-caseASD0172
 NA
 NA
 ASD
 Diagnosis of ASD according to DSM-5 criteria.
 
 14490623
 14573076
  82454
 GRCh38
 Deletion
 Yes
  kushima_22_ASD_discovery_cases-caseASD0391
 NA
 NA
 ASD
 Diagnosis of ASD according to DSM-5 criteria.
 
 15307782
 15453889
  146108
 GRCh38
 Deletion
 Yes
  kushima_22_BPD_discovery_cases-caseBD0643
 NA
 NA
 Bipolar disorder
 Diagnosis of bipolar disorder according to DSM-5 criteria.
 
 14524304
 14749977
  225674
 GRCh38
 Deletion
 Yes
  kushima_22_BPD_discovery_cases-caseBD1085
 NA
 NA
 Bipolar disorder
 Diagnosis of bipolar disorder according to DSM-5 criteria.
 
 14681250
 15022383
  341134
 GRCh38
 Deletion
 Yes
  kushima_22_BPD_discovery_cases-caseBD1261
 NA
 NA
 Bipolar disorder
 Diagnosis of bipolar disorder according to DSM-5 criteria.
 
 14933044
 15220689
  287646
 GRCh38
 Deletion
 Yes
  kushima_22_BPD_discovery_cases-caseBD1634
 NA
 NA
 Bipolar disorder
 Diagnosis of bipolar disorder according to DSM-5 criteria.
 
 14646531
 14725206
  78676
 GRCh38
 Deletion
 Yes
  kushima_22_SCZ_discovery_cases-caseSCZ0052
 NA
 NA
 Schizophrenia
 Diagnosis of schizophrenia according to DSM-5 criteria.
 
 14656733
 14876708
  219976
 GRCh38
 Deletion
 Yes
  kushima_22_SCZ_discovery_cases-caseSCZ2312
 NA
 NA
 Schizophrenia
 Diagnosis of schizophrenia according to DSM-5 criteria.
 
 14631583
 14707775
  76193
 GRCh38
 Deletion
 Yes
  kushima_22_SCZ_discovery_cases-caseSCZ2692
 NA
 NA
 Schizophrenia
 Diagnosis of schizophrenia according to DSM-5 criteria.
 
 14613901
 14730003
  116103
 GRCh38
 Deletion
 Yes
  kushima_22_SCZ_discovery_cases-caseSCZ3253
 NA
 NA
 Schizophrenia
 Diagnosis of schizophrenia according to DSM-5 criteria.
 
 14646531
 14832765
  186235
 GRCh38
 Deletion
 Yes
  leppa_16_ASD_discovery_cases-AU1143301
 N/A
 M
 ASD
 
 
 16714355
 17299355
  585001
 GRCh38
 Duplication
 No
  leppa_16_ASD_discovery_cases-AU1158301
 N/A
 M
 ASD
 
 
 16708355
 17299355
  591001
 GRCh38
 Duplication
 No
  lesca_12_EP_discovery_cases-case10A603
 NA
 M
 Epilepsy
 Phenotype: s-CSWSS . Seizure Characteristics: GTCS, absences. Autistic features: No. ADHD features: Yes. Other features: Left central/occipital PMG.
 Initial cognitive development: Delayed. Cognitive regression: No. Verbal IQ 74, performance IQ 82 (at 15 years of age).
 14510651
 14610487
  99837
 GRCh38
 Deletion
 Yes
  lesca_12_EP_discovery_cases-case12-522
 NA
 M
 Epilepsy
 Phenotype: LKS-woESES. Seizure Characteristics: Absences, PS with dysarthria. Autistic features: No. ADHD features: No. Other features: None.
 Initial cognitive development: Normal. Cognitive regression: Yes. Verbal IQ 112, performance IQ 107 (at 12 years of age).
 14415151
 14483861
  68711
 GRCh38
 Duplication
 Yes
  levy_11_ASD_discovery_cases-11986.p1
 NA
 M
 ASD
 NA
 NA
 12760195
 13357580
  597386
 GRCh38
 Deletion
 No
  lintas_17_ASD_discovery_cases-case11.1
 N/A
 N/A
 Autism
 No additional clinical information available
 
 14732381
 14775806
  43426
 GRCh38
 Deletion
 Yes
  lintas_17_ASD_discovery_cases-case7.1
 N/A
 N/A
 Autism
 No additional clinical information available
 
 14843726
 14904142
  60417
 GRCh38
 Deletion
 Yes
  maini_18_ASD/DD/ID_discovery_cases-case73
  NA NA
 9 yrs.
 M
 Dysmorphic features and ocular anomalies
 Birth history: born at 35 weeks gestation following a pregnancy marked by steroid therapy. Developmental milestones: no motor or language delay. Language and communication evaluation: no language disorder or absent speech. Behavioral/psychiatric evaluation: no reported behavioral or psychiatric abnormalities. Epilepsy/abnormal EEG: no reported epilepsy or EEG abnormalities. Additional medical history: ocular anomalies. Dysmorphic features: short palpebral fissures, micro/anophtalmia. Growth parameters: normal head circumference, normal growth. Family history: negative for consanguineity, positive for familiarity, family history negative for NDDs.
 Normal (no intellectual disability or learning disorder)
 14719394
 15184834
  465441
 GRCh38
 Deletion
 No
  maini_18_ASD/DD/ID_discovery_cases-case_unknown112
  NA NA
 N/A
 N/A
 NDD/MCA/dysmorphic features
 CNV was identified in an individual with one or more neurodevelopmental disorders (NDD), multiple congenital anomalies (MCA), and/or dysmorphic features (detailed clinical information was not available). CNV classified as variant of unknown significance-likely benign (VOUS-LB)
 
 14323777
 14963568
  639792
 GRCh38
 Deletion
 No
  marshall_08_ASD_discovery_cases-SK0335-003
 NA
 F
 ASD
 NA
 NA
 15027084
 15082568
  55485
 GRCh38
 Deletion
 Yes
  morrow_08_ASD_discovery_cases-case7301
 NA
 
 ASD
 NA
 NA
 14606000
 14792000
  185600
 Unknown
 Deletion
 No
  morrow_08_ASD_discovery_cases-case7801
 NA
 
 ASD
 NA
 NA
 14963000
 15108000
  21800
 Unknown
 Deletion
 No
  mosca_16_DCD_discovery_cases-case103303
 N/A
 M
 DCD (with or without ADHD and/or RD)
 Ancestry: unknown. Family history: maternal diagnosis unknown; paternal diagnosis unknown.
 
 14629643
 14652432
  22790
 GRCh38
 Deletion
 No
  oikonomakis_16_ASD_discovery_cases-case4
 4 yrs.
 M
 ASD
 Case was assessed for ASD according to DSM-IV behavioral criteria. Clinical characteristics other than ASD: seizures, behavioral problems, hyperactivity, atrophy of hippocampus on MRI
 
 14782337
 15197082
  414746
 GRCh38
 Deletion
 No
  oikonomakis_16_ASD_discovery_cases-case472
 6 yrs.
 M
 ASD
 Case was assessed for ASD according to DSM-IV behavioral criteria. Clinical characteristics other than ASD: low set ears, hypertelorism, antimogolodi palpebral fissures, broad base to nose, short philtrum, high arched palate
 ID
 14868855
 15153570
  284716
 GRCh38
 Deletion
 No
  oikonomakis_16_ASD_discovery_cases-case477
 5 yrs.
 F
 ASD
 Case was assessed for ASD according to DSM-IV behavioral criteria
 ID
 13630079
 14209945
  579867
 GRCh38
 Duplication
 No
  picinelli_16_ASD/ADHD/DD/ID_discovery_cases-patient6
 N/A
 M
 ASD and intellectual disability
 Case met diagnostic criteria for ASD with both ADOS and ADI scores falling into the autism spectrum range. Birth/neonatal history: born after artificial insemination by ICSI. Developmental milestones: normal motor development; delay in expressive language. Behavioral/psychiatric evaluation: anxiety; OCD; attention deficit disorder (ADD). Family history: mother suffers from major depression, psoriasis, and eating disorder; father's family includes one case of intellectual disability, a paternal grandmother affected by depression and autoimmune thyroiditis, and a paternal uncle diagnosed with OCD.
 Mild intellectual disability (TIQ score of 64); memory impairment
 14775747
 15060892
  285146
 GRCh38
 Deletion
 No
  pinto_10_ASD_discovery_cases-case5021_5
 NA
 M
 Autism
 Below average language (<1%ile), no epilepsy, no dysmorphic features
 Average nonverbal IQ (55%ile)
 15071071
 15163160
  92090
 GRCh38
 Deletion
 Yes
  pinto_10_ASD_discovery_cases-case5061_3
 NA
 M
 ASD
 No epilepsy, premature ( 28 wks), brain dysfunction, soft neurological signs, amblyopia, hair whorls, 5th finger clinodactyly, long 3rd toe, toe syndactyly
 Below average IQ (<1%ile)
 14891667
 14950848
  59182
 GRCh38
 Deletion
 Yes
  pinto_10_ASD_discovery_cases-case5066_4
 NA
 M
 Autism
 Language delay, no epilepsy, malformed ears
 Average IQ
 14818398
 14879494
  61097
 Unknown
 Deletion
 Yes
  pinto_10_ASD_discovery_cases-case5244_3
 NA
 M
 Autism
 Average language (55%ile), apraxia, possible seizures, microcephaly
 Above average nonverbal IQ (95%ile)
 14849807
 14960041
  110235
 GRCh38
 Deletion
 Yes
  pinto_10_ASD_discovery_cases-case5250_4
 NA
 M
 Autism
 No epilepsy, adherent ear lobes
 Below average IQ (<1%ile)
 14801038
 14845141
  44104
 GRCh38
 Deletion
 Yes
  pinto_10_ASD_discovery_cases-case5335_3
 NA
 M
 Autism
 Mental retardation
 MR (IQ Leiter = 36)
 14617088
 15020139
  403052
 GRCh38
 Deletion
 Yes
  pinto_10_ASD_discovery_cases-case5368_3
 NA
 M
 ASD
 NA
 NA
 14868013
 15001313
  133301
 GRCh38
 Deletion
 Yes
  pinto_10_ASD_discovery_cases-case5523_3
 NA
 F
 ASD
 NA
 NA
 13102471
 13149449
  46979
 GRCh38
 Duplication
 Yes
  pinto_10_ASD_discovery_cases-case6023_3
 NA
 M
 Autism
 High-functioning autism, language delay, normal physical exam, no epilepsy
 Normal IQ
 15020139
 15232647
  212509
 GRCh38
 Deletion
 Yes
  prasad_12_ASD_discovery_cases-case122712L
 NA
 F
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. CNV identified by previous SNP microarray study
 
 13026945
 13082320
  55376
 Unknown
 Duplication
 No
  prasad_12_ASD_discovery_cases-case154269L
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. CNV identified by previous SNP microarray study
 
 14274947
 14300558
  25612
 Unknown
 Deletion
 No
  prasad_12_ASD_discovery_cases-case67839
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. Novel CNV
 
 12760667
 12839963
  79297
 Unknown
 Duplication
 No
  prasad_12_ASD_discovery_cases-case80022
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. Novel CNV
 
 16611545
 16620455
  8911
 Unknown
 Deletion
 No
  sajan_13_ACC/CBLH/PMG_discovery_cases-case1600-0
 N/A
 N/A
 ACC-CBLH
 Diagnosis of agenesis of the corpus callosum (ACC) and cerebellar hypoplasia (CBLH). ASD: unknown. Seizures: no.
 Developmental delay: yes. Intellectual disability: unknown.
 14928095
 14969117
  41023
 GRCh38
 Deletion
 No
  sajan_13_ACC/CBLH/PMG_discovery_cases-caseLR02-178
 N/A
 N/A
 ACC-CBLH-PMG
 Diagnosis of agenesis of the corpus callosum (ACC), cerebellar hypoplasia (CBLH), and polymicrogyria (PMG). ASD: N/A. Seizures: N/A.
 Developmental delay: yes. Intellectual disability: N/A.
 14781064
 14903655
  122592
 GRCh38
 Deletion
 No
  sajan_13_ACC/CBLH/PMG_discovery_cases-caseLR04-069
 N/A
 N/A
 PMG
 Diagnosis of polymicrogyria (PMG).
 
 14777465
 14974297
  196833
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11009.p1
 9
 M
 Autism
 NA
 Full-scale IQ, 93; non-verbal IQ, 93; verbal IQ, 96
 15082304
 15122954
  40651
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11040.p1
 4.7
 M
 Autism
 NA
 Full-scale IQ, 62; non-verbal IQ, 67; verbal IQ, 64
 14813715
 14909565
  95851
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11057.p1
 8.7
 M
 Autism
 NA
 Full-scale IQ, 89; non-verbal IQ, 89; verbal IQ, 95
 14757197
 14759193
  1997
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11073.p1
 9.7
 M
 Autism
 NA
 Full-scale IQ, 100; non-verbal IQ, 100; verbal IQ, 101
 15330785
 15338121
  7337
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11075.p1
 6.7
 M
 Autism
 NA
 Full-scale IQ, 39; non-verbal IQ, 54; verbal IQ, 24
 14938168
 15032863
  94696
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11101.p1
 5.2
 M
 Autism
 NA
 Full-scale IQ, 46; non-verbal IQ, 57; verbal IQ, 38
 14868013
 15208952
  340940
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11122.p1
 7.8
 F
 Autism
 NA
 Full-scale IQ, 113; non-verbal IQ, 114; verbal IQ 107
 15071071
 15180106
  109036
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11133.p1
 17
 M
 Autism
 NA
 Full-scale IQ, 128; non-verbal IQ, 110; verbal IQ 140
 14903655
 14934063
  30409
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11145.p1
 5.9
 M
 Autism
 NA
 Full-scale IQ, 76; non-verbal IQ, 79; verbal IQ 80
 15330785
 15338121
  7337
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11229.p1
 9.4
 M
 Autism
 NA
 Full-scale IQ, 63; non-verbal IQ, 68; verbal IQ, 56
 14792143
 14802096
  9954
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11252.p1
 6.3
 M
 Autism
 NA
 Full-scale IQ, 78; non-verbal IQ, 72; verbal IQ, 96
 14545518
 14583273
  37756
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11256.p1
 11.3
 M
 Autism
 NA
 Full-scale IQ, 102; non-verbal IQ, 127; verbal IQ, 98
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11404.p1
 7.3
 M
 Autism
 NA
 Full-scale IQ, 85; non-verbal IQ, 90; verbal IQ, 82
 14801038
 14859856
  58819
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11415.p1
 11.6
 M
 ASD
 NA
 Full-scale IQ, 80; non-verbal IQ, 86; verbal IQ, 76
 14891667
 14956289
  64623
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11447.p1
 6.6
 M
 Autism
 NA
 Full-scale IQ, 89; non-verbal IQ, 97; verbal IQ, 82
 12483434
 12488857
  5424
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11466.p1
 9.2
 M
 Aspergers
 NA
 Full-scale IQ, 121; non-verbal IQ, 121; verbal IQ, 113
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11468.p1
 10.7
 M
 Aspergers
 NA
 Full-scale IQ, 89; non-verbal IQ, 92; verbal IQ, 87
 14801038
 14849807
  48770
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11540.p1
 8.2
 M
 Autism
 NA
 Full-scale IQ, 59; non-verbal IQ, 67; verbal IQ, 55
 17580396
 17587674
  7279
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11567.p1
 9.4
 F
 Autism
 NA
 Full-scale IQ, 48; non-verbal IQ, 55; verbal IQ, 34
 14749245
 14816926
  67682
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11568.p1
 13.5
 F
 Autism
 NA
 Full-scale IQ, 51; non-verbal IQ, 72; verbal IQ, 28
 16586557
 16607950
  21394
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11568.p1
 13.5
 F
 Autism
 NA
 Full-scale IQ, 51; non-verbal IQ, 72; verbal IQ, 28
 15330785
 15338121
  7337
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11794.p1
 8.3
 M
 Autism
 NA
 Full-scale IQ, 36; non-verbal IQ, 40; verbal IQ, 33
 14929612
 14940960
  11349
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11828.p1
 5.5
 M
 Autism
 NA
 Full-scale IQ, 74; non-verbal IQ, 89; verbal IQ, 56
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11920.p1
 10.8
 M
 Aspergers
 NA
 Full-scale IQ, 96; non-verbal IQ, 91; verbal IQ, 106
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11924.p1
 7.6
 M
 Autism
 NA
 Full-scale IQ, 87; non-verbal IQ, 105; verbal IQ, 74
 16100187
 16101675
  1489
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11962.p1
 6.3
 M
 Autism
 NA
 Full-scale IQ, 81; non-verbal IQ, 99; verbal IQ, 75
 12638379
 12657049
  18671
 GRCh38
 Duplication
 No
  sanders_11_ASD_discovery_cases-11962.p1
 6.3
 M
 Autism
 NA
 Full-scale IQ, 81; non-verbal IQ, 99; verbal IQ, 75
 12819919
 12909558
  89640
 GRCh38
 Duplication
 No
  sanders_11_ASD_discovery_cases-11970.p1
 5.3
 M
 Autism
 NA
 Full-scale IQ, 150; non-verbal IQ, 159; verbal IQ, 130
 14882326
 14903655
  21330
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11982.p1
 9.3
 M
 Autism
 NA
 Full-scale IQ, 79; non-verbal IQ, 78; verbal IQ, 86
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11986.p1
 10.5
 M
 Autism
 NA
 Full-scale IQ, 109; non-verbal IQ, 101; verbal IQ, 123
 12760475
 13363032
  602558
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12057.p1
 12.1
 M
 Autism
 NA
 Full-scale IQ, 43; non-verbal IQ, 50; verbal IQ, 29
 16100187
 16101675
  1489
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12072.p1
 15.6
 F
 Autism
 NA
 Full-scale IQ, 139; non-verbal IQ, 116; verbal IQ, 167
 15330785
 15338121
  7337
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12119.p1
 5.2
 M
 Autism
 NA
 Full-scale IQ, 48; non-verbal IQ, 55; verbal IQ, 41
 14774096
 14849807
  75712
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12120.p1
 5.1
 M
 Autism
 NA
 Full-scale IQ, 105; non-verbal IQ, 115; verbal IQ, 85
 12483434
 12488857
  5424
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12170.p1
 7.8
 F
 ASD
 NA
 Full-scale IQ, 80; non-verbal IQ, 85; verbal IQ, 77
 16100187
 16101675
  1489
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12192.p1
 6.9
 M
 Autism
 NA
 Full-scale IQ, 127; non-verbal IQ, 130; verbal IQ, 115
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12208.p1
 7.4
 M
 Autism
 NA
 Full-scale IQ, 109; non-verbal IQ, 118; verbal IQ, 89
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12255.p1
 4.1
 M
 Autism
 NA
 Full-scale IQ, 92; non-verbal IQ, 98; verbal IQ, 87
 14960041
 14985177
  25137
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12265.p1
 6.8
 M
 Autism
 NA
 Full-scale IQ, 87; non-verbal IQ, 96; verbal IQ, 78
 15056969
 15064766
  7798
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12266.p1
 5.7
 M
 Autism
 NA
 Full-scale IQ, 58; non-verbal IQ, 65; verbal IQ, 54
 15330785
 15338121
  7337
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12274.p1
 5.4
 M
 Autism
 NA
 Full-scale IQ, 39; non-verbal IQ, 48; verbal IQ, 30
 16100187
 16101675
  1489
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12330.p1
 4.5
 M
 Autism
 NA
 Full-scale IQ, 59; non-verbal IQ, 62; verbal IQ, 62
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12332.p1
 12.3
 M
 ASD
 NA
 Full-scale IQ, 107; non-verbal IQ, 101; verbal IQ, 119
 14777465
 14836807
  59343
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12339.p1
 15.5
 M
 Autism
 NA
 Full-scale IQ, 43; non-verbal IQ, 63; verbal IQ, 33
 14799673
 14859792
  60120
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12354.p1
 4.7
 M
 Autism
 NA
 Full-scale IQ, 72; non-verbal IQ, 68; verbal IQ, 81
 14945687
 14977989
  32303
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12359.p1
 9.3
 M
 Autism
 NA
 Full-scale IQ, 78; non-verbal IQ, 87; verbal IQ, 69
 16100187
 16101675
  1489
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12369.p1
 7.3
 M
 Autism
 NA
 Full-scale IQ, 53; non-verbal IQ, 59; verbal IQ, 50
 14799673
 14849807
  50135
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12383.p1
 9
 M
 Autism
 NA
 Full-scale IQ, 101; non-verbal IQ, 88; verbal IQ, 90
 14945687
 15050398
  104712
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12392.p1
 7
 M
 ASD
 NA
 Full-scale IQ, 103; non-verbal IQ, 102; verbal IQ, 105
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12447.p1
 4.6
 M
 Autism
 NA
 Full-scale IQ, 53; non-verbal IQ, 60; verbal IQ, 45
 14687597
 14822808
  135212
 GRCh38
 Deletion
 Yes
  sanders_11_ASD_discovery_cases-12494.p1
 7.9
 M
 Autism
 NA
 Full-scale IQ, 59; non-verbal IQ, 67; verbal IQ, 56
 16100187
 16101675
  1489
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12507.p1
 18
 M
 Autism
 NA
 Full-scale IQ, 80; non-verbal IQ, 73; verbal IQ, 100
 14891667
 14947216
  55550
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12587.p1
 6.4
 M
 Autism
 NA
 Full-scale IQ, 97; non-verbal IQ, 98; verbal IQ, 98
 16586557
 16604669
  18113
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12628.p1
 11.2
 M
 Autism
 NA
 Full-scale IQ, 118; non-verbal IQ, 102; verbal IQ, 120
 14799673
 14845141
  45469
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12629.p1
 4.1
 M
 Autism
 NA
 Full-scale IQ, 110; non-verbal IQ, 113; verbal IQ, 101
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12640.p1
 4.3
 M
 Autism
 NA
 Full-scale IQ, 112; non-verbal IQ, 118; verbal IQ, 99
 15056969
 15120818
  63850
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12652.p1
 8.3
 M
 Autism
 NA
 Full-scale IQ, 73; non-verbal IQ, 79; verbal IQ, 69
 14849807
 15014697
  164891
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12656.p1
 10.9
 M
 Autism
 NA
 Full-scale IQ, 40; non-verbal IQ, 46; verbal IQ, 29
 16100187
 16101675
  1489
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12661.p1
 8.4
 F
 Autism
 NA
 Full-scale IQ, 48; non-verbal IQ, 59; verbal IQ, 33
 12483434
 12488857
  5424
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12691.p1
 10.9
 F
 Autism
 NA
 Full-scale IQ, 34; non-verbal IQ, 32; verbal IQ, 39
 16454852
 16470997
  16146
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12695.p1
 12.3
 M
 Autism
 NA
 Full-scale IQ, 49; non-verbal IQ, 56; verbal IQ, 35
 14556162
 14558218
  2057
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12757.p1
 5.3
 M
 Autism
 NA
 Full-scale IQ, 57; non-verbal IQ, 62; verbal IQ, 55
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12782.p1
 13.1
 M
 Autism
 NA
 Full-scale IQ, 74; non-verbal IQ, 76; verbal IQ, 77
 15190312
 15226818
  36507
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12852.p1
 5.1
 M
 Autism
 NA
 Full-scale IQ, 77; non-verbal IQ, 78; verbal IQ, 83
 14450817
 14468538
  17722
 GRCh38
 Duplication
 No
  sanders_11_ASD_discovery_cases-12921.p1
 11.4
 M
 Autism
 NA
 Full-scale IQ, 80; non-verbal IQ, 74; verbal IQ, 100
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12956.p1
 5.1
 M
 Autism
 NA
 Full-scale IQ, 84; non-verbal IQ, 91; verbal IQ, 80
 15892325
 15908146
  15822
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12964.p1
 6.9
 M
 Autism
 NA
 Full-scale IQ, 38; non-verbal IQ, 48; verbal IQ, 28
 15330785
 15343527
  12743
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12972.p1
 10.8
 M
 Autism
 NA
 Full-scale IQ, 72; non-verbal IQ, 79; verbal IQ, 63
 16100187
 16101675
  1489
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13007.p1
 13.6
 M
 Autism
 NA
 Full-scale IQ, 91; non-verbal IQ, 107; verbal IQ, 67
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13007.p1
 13.6
 M
 Autism
 NA
 Full-scale IQ, 91; non-verbal IQ, 107; verbal IQ, 67
 14792143
 14800139
  7997
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13136.p1
 6.5
 M
 Autism
 NA
 Full-scale IQ, 42; non-verbal IQ, 53; verbal IQ, 31
 14783965
 14857319
  73355
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13144.p1
 6.5
 M
 Autism
 NA
 Full-scale IQ, 112; non-verbal IQ, 119; verbal IQ, 95
 14801038
 14845141
  44104
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13152.p1
 7.3
 M
 Autism
 NA
 Full-scale IQ, 77; non-verbal IQ, 79; verbal IQ, 78
 16587484
 16607663
  20180
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13166.p1
 9.1
 M
 Autism
 NA
 Full-scale IQ, 46; non-verbal IQ, 47; verbal IQ, 45
 15330785
 15343527
  12743
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13183.p1
 5.8
 M
 Autism
 NA
 Full-scale IQ, 60; non-verbal IQ, 69; verbal IQ, 56
 16097683
 16101675
  3993
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13226.p1
 8.7
 M
 ASD
 NA
 Full-scale IQ, 85; non-verbal IQ, 87; verbal IQ, 85
 15330785
 15343527
  12743
 GRCh38
 Deletion
 No
  soueid_16_ASD_discovery_cases-caseBAK39
 N/A
 M
 Autism
 Case fulfilled DSM-V criteria for autism; no other information available
 
 14807708
 15113290
  305583
 GRCh38
 Deletion
 No
  streata_22_ASD/DD/ID_discovery_cases-case102
  NA NA
 NA
 M
 Intellectual disability
 Speech and/or language delay or impairment, facial dysmorphism.
 Mild/moderate intellectual disability
 15868687
 17209600
  1340914
 GRCh38
 Duplication
 No
  wang_18_TS_replication_cases-case25139.p1
 N/A
 N/A
 Tourette syndrome
 No additional clinical information available
 
 14742363
 14921876
  179514
 GRCh38
 Deletion
 No
  wintle_10_ASD_discovery_cases-AN09402
 11
 M
 Autism
 Suspected autism
 
 15831848
 15840820
  8973
 GRCh38
 Deletion
 Yes
  xu_08_WAGR/ASD/DD/ID_discovery_cases-caseF14a
 12 yrs.
 F
 WAGR syndrome, ASD, ID, and seizures
 Autism, anxiety, ADHD, high tolerance to pain, obsessive-compulsive, seizures
 Intellectual disability
 14151031
 14335261
  184231
 GRCh38
 Deletion
 No
  zarrei_19_ASD/ADHD/OCD/SCZ_discovery_cases-case1-0415-004
  NA NA
 N/A
 M
 ASD
 Primary diagnosis: ASD. Additional phenotype(s): no additional phenotypes reported
 
 15950929
 15972857
  21929
 GRCh38
 Duplication
 Yes
  zarrei_19_ASD/ADHD/OCD/SCZ_discovery_cases-case7-0072-003
  NA NA
 N/A
 M
 ASD
 Primary diagnosis: ASD. Additional phenotype(s): no additional phenotypes reported
 
 15021566
 15258823
  237258
 GRCh38
 Deletion
 Yes
  zarrei_19_ASD/ADHD/OCD/SCZ_discovery_cases-caseOCD1115-0625-1325-3
  NA NA
 N/A
 M
 ADHD and OCD
 Primary diagnosis: OCD. Additional phenotype(s): ADHD
 
 14629311
 14701179
  71869
 GRCh38
 Deletion
 Yes
  zhou_19_ASD_discovery_cases-caseAU035503
 N/A
 N/A
 ASD
 Diagnosis of ASD by ADI-R and ADOS.
 
 13993500
 14053496
  59997
 GRCh38
 Duplication
 Yes

Controls

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  bacchelli_20_ASD_discovery_controls-control10026
  N/A
  F
  Control
  Control
 
  15073790
  15128962
  55173
  GRCh38
  Deletion
  No
  bacchelli_20_ASD_discovery_controls-control10081
  N/A
  F
  Control
  Control
 
  15047067
  15107939
  60873
  GRCh38
  Deletion
  No
  bacchelli_20_ASD_discovery_controls-control10112
  N/A
  F
  Control
  Control
 
  14588112
  14640345
  52234
  GRCh38
  Deletion
  No
  bacchelli_20_ASD_discovery_controls-control20121
  N/A
  F
  Control
  Control
 
  14534174
  14595802
  61629
  GRCh38
  Deletion
  No
  bacchelli_20_ASD_discovery_controls-control20138
  N/A
  F
  Control
  Control
 
  13854161
  14004914
  150754
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-control110036001873_
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14357847
  14444691
  86845
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-control110036014967_
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14831886
  14930357
  98472
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-control110036023109_
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14899681
  15039372
  139692
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB149228_1007853581
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14687597
  14778523
  90927
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB228990_1007873300
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14872404
  14903655
  31252
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB269978_1007875858
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14891667
  14950848
  59182
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB294025_1007842040
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14947216
  15048316
  101101
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB347545_0067942603
  N/A
  N/A
  Control
  No previous psychiatric history
 
  13762651
  13823455
  60805
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB390299_1007840224
  N/A
  N/A
  Control
  No previous psychiatric history
 
  12822046
  12909558
  87513
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlB407301_1007871721
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14732534
  14891667
  159134
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB422760_1007840446
  N/A
  N/A
  Control
  No previous psychiatric history
 
  15071071
  15163160
  92090
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB444871_1007853318
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14104654
  14195343
  90690
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlB647111_1007846512
  N/A
  N/A
  Control
  No previous psychiatric history
 
  15071071
  15163160
  92090
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB658740_1007854250
  N/A
  N/A
  Control
  No previous psychiatric history
 
  12822046
  12909558
  87513
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlB805034_1007875356
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14903655
  15096384
  192730
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB814504_1007872259
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14891667
  14950848
  59182
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB895793_1007844868
  N/A
  N/A
  Control
  No previous psychiatric history
 
  15071071
  15163160
  92090
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB900846_1007844887
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14728805
  15039372
  310568
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB906859_1007845326
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14826953
  15257249
  430297
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB928410_0067942587
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14687597
  14777465
  89869
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB995629_1007855005
  N/A
  N/A
  Control
  No previous psychiatric history
 
  15050398
  15112218
  61821
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900090_900090
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14713781
  14750949
  37169
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900104_900104
  N/A
  N/A
  Control
  No previous psychiatric history
 
  15020139
  15122954
  102816
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900174_900174
  N/A
  N/A
  Control
  No previous psychiatric history
 
  13224691
  13271197
  46507
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900185_900185
  N/A
  N/A
  Control
  No previous psychiatric history
 
  15173399
  15309055
  135657
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900211_900211
  N/A
  N/A
  Control
  No previous psychiatric history
 
  15082304
  15122954
  40651
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900369_900369
  N/A
  N/A
  Control
  No previous psychiatric history
 
  15104456
  15147241
  42786
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900504_900504
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14868013
  14947216
  79204
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900520_900520
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14713781
  14750949
  37169
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900716_900716
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14927015
  15116059
  189045
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900818_900818
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14704701
  15078236
  373536
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900845_900845
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14822808
  14915307
  92500
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900877_900877
  N/A
  N/A
  Control
  No previous psychiatric history
 
  12819919
  12909558
  89640
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900914_900914
  N/A
  N/A
  Control
  No previous psychiatric history
 
  15045185
  15109615
  64431
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900948_900948
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14944629
  15058869
  114241
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900990_900990
  N/A
  N/A
  Control
  No previous psychiatric history
 
  15027084
  15161313
  134230
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_901245_901245
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14757197
  14882326
  125130
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_902653_902653
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14849807
  15098078
  248272
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_902679_902679
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14725970
  14969117
  243148
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_902688_902688
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14816926
  15027824
  210899
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_902809_902809
  N/A
  N/A
  Control
  No previous psychiatric history
 
  14831886
  14895454
  63569
  GRCh38
  Deletion
  No
  kanduri_15_ASD_discovery_controls-control_split1079
  N/A
  N/A
  Control
  Control screened for DSM-IV mental disorders using the Composite International Diagnostic Interview and psychotic disorders using the research version of the Structured Clinical Interview for DSM-IV
 
  14781684
  14823472
  41789
  Unknown
  Deletion
  No
  kanduri_15_ASD_discovery_controls-control_split1202
  N/A
  N/A
  Control
  Control screened for DSM-IV mental disorders using the Composite International Diagnostic Interview and psychotic disorders using the research version of the Structured Clinical Interview for DSM-IV
 
  14925275
  15122254
  196980
  Unknown
  Deletion
  No
  kanduri_15_ASD_discovery_controls-control_split267
  N/A
  N/A
  Control
  Control screened for DSM-IV mental disorders using the Composite International Diagnostic Interview and psychotic disorders using the research version of the Structured Clinical Interview for DSM-IV
 
  14723009
  14785705
  62697
  Unknown
  Deletion
  No
  krumm_13_ASD_discovery_controls-control13418.s1
  N/A
  F
  Control
  Unaffected sibling from SSC quad family 13418. SRS score of 46.
 
  13877519
  13888512
  10994
  GRCh38
  Duplication
  No (not tested)
  krumm_15_ASD_discovery_controls-control11350.s1
  N/A
  Male
  Control
  Unaffected sibling from the Simons Simplex Collection (SSC)
 
  13877519
  13888512
  10994
  GRCh38
  Duplication
  Yes
  krumm_15_ASD_discovery_controls-control13418.s1
  N/A
  Female
  Control
  Unaffected sibling from the Simons Simplex Collection (SSC)
 
  13877519
  13888512
  10994
  GRCh38
  Duplication
  Yes
  kushima_22_ASD/BPD/SCZ_discovery_controls-controlCON3377
  NA
  NA
  Control
  Control with no history of mental disorders based on responses to questionnaires or self-reporting.
 
  14976615
  15226293
  249679
  GRCh38
  Deletion
  Yes
  levy_11_ASD_discovery_controls-11066.s3
  NA
  F
  Control
  NA
  NA
  14842926
  15268192
  425267
  GRCh38
  Deletion
  No
  nord_11_ASD_discovery_controls-04C28137
 
 
  Control
 
 
  13661037
  13773072
  112036
  Unknown
  Duplication
 
  sanders_11_ASD_discovery_controls-11009.s1
  7.6
  M
  Control (matched sibling)
  NA
  NA
  15082304
  15122954
  40651
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11057.s1
  5.9
  M
  Control (matched sibling)
  NA
  NA
  14757197
  14759193
  1997
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11073.s1
  7.8
  F
  Control (matched sibling)
  NA
  NA
  15330785
  15338121
  7337
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11101.s1
  6.7
  F
  Control (matched sibling)
  NA
  NA
  14868013
  15217325
  349313
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11206.s1
  8.3
  F
  Control (matched sibling)
  NA
  NA
  14878264
  14891667
  13404
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11216.s1
  6.4
  M
  Control (matched sibling)
  NA
  NA
  16586557
  16604669
  18113
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11229.s1
  6.1
  M
  Control (matched sibling)
  NA
  NA
  14792143
  14802096
  9954
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11239.s1
  15.1
  M
  Control (matched sibling)
  NA
  NA
  14801038
  14845141
  44104
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11252.s1
  11.4
  M
  Control (matched sibling)
  NA
  NA
  14545518
  14583273
  37756
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11256.s1
  14
  M
  Control (matched sibling)
  NA
  NA
  14801038
  14845141
  44104
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11270.s1
  4.2
  M
  Control (matched sibling)
  NA
  NA
  14801038
  14845141
  44104
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11304.s1
  8.3
  F
  Control (matched sibling)
  NA
  NA
  14801038
  14845141
  44104
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11415.s1
  13.6
  M
  Control (matched sibling)
  NA
  NA
  14891667
  14960041
  68375
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11447.s1
  8.4
  F
  Control (matched sibling)
  NA
  NA
  12483434
  12488857
  5424
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11459.s1
  14.3
  M
  Control (matched sibling)
  NA
  NA
  15774221
  15783700
  9480
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11556.s1
  7.3
  F
  Control (matched sibling)
  NA
  NA
  16586557
  16596509
  9953
  GRCh38
  Duplication
  No
  sanders_11_ASD_discovery_controls-11644.s1
  14.2
  F
  Control (matched sibling)
  NA
  NA
  15330785
  15338121
  7337
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11828.s1
  5.5
  F
  Control (matched sibling)
  NA
  NA
  14801038
  14845141
  44104
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11839.s1
  4
  F
  Control (matched sibling)
  NA
  NA
  16100187
  16101675
  1489
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11843.s1
  16.9
  F
  Control (matched sibling)
  NA
  NA
  12638379
  12657049
  18671
  GRCh38
  Duplication
  No
  sanders_11_ASD_discovery_controls-11843.s1
  16.9
  F
  Control (matched sibling)
  NA
  NA
  12819919
  12901963
  82045
  GRCh38
  Duplication
  No
  sanders_11_ASD_discovery_controls-11920.s1
  18.3
  M
  Control (matched sibling)
  NA
  NA
  14801038
  14845141
  44104
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11933.s1
  6.8
  M
  Control (matched sibling)
  NA
  NA
  14726481
  14836372
  109892
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11959.s1
  9.7
  F
  Control (matched sibling)
  NA
  NA
  14732534
  14763259
  30726
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11982.s1
  5.1
  F
  Control (matched sibling)
  NA
  NA
  14801038
  14845141
  44104
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11998.s1
  6.8
  M
  Control (matched sibling)
  NA
  NA
  14777465
  14933932
  156468
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12057.s1
  14.3
  F
  Control (matched sibling)
  NA
  NA
  16100187
  16101675
  1489
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12099.s1
  13.1
  M
  Control (matched sibling)
  NA
  NA
  16100187
  16101675
  1489
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12198.s1
  11.3
  M
  Control (matched sibling)
  NA
  NA
  14903655
  14934063
  30409
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12339.s1
  12.9
  F
  Control (matched sibling)
  NA
  NA
  14799673
  14845141
  45469
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12346.s1
  15
  M
  Control (matched sibling)
  NA
  NA
  14799673
  14845141
  45469
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12359.s1
  6.3
  F
  Control (matched sibling)
  NA
  NA
  16100187
  16101675
  1489
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12507.s1
  26.1
  F
  Control (matched sibling)
  NA
  NA
  14891667
  14950848
  59182
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12610.s1
  8.8
  F
  Control (matched sibling)
  NA
  NA
  12483434
  12488857
  5424
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12628.s1
  13.6
  F
  Control (matched sibling)
  NA
  NA
  14801038
  14859856
  58819
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12652.s1
  4.1
  F
  Control (matched sibling)
  NA
  NA
  14849807
  15014697
  164891
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12661.s1
  11.2
  F
  Control (matched sibling)
  NA
  NA
  14444691
  14468538
  23848
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12691.s1
  23.8
  M
  Control (matched sibling)
  NA
  NA
  16454852
  16470997
  16146
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12852.s1
  6.3
  M
  Control (matched sibling)
  NA
  NA
  14450817
  14468538
  17722
  GRCh38
  Duplication
  No
  sanders_11_ASD_discovery_controls-12916.s1
  12.3
  M
  Control (matched sibling)
  NA
  NA
  14799779
  14849807
  50029
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12937.s1
  18.9
  M
  Control (matched sibling)
  NA
  NA
  15807354
  15812477
  5124
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12964.s1
  8.5
  M
  Control (matched sibling)
  NA
  NA
  15330785
  15343527
  12743
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-13007.s1
  19.8
  F
  Control (matched sibling)
  NA
  NA
  14799673
  14845141
  45469
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-13072.s1
  8.7
  F
  Control (matched sibling)
  NA
  NA
  15774221
  15783700
  9480
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-13136.s1
  4.3
  F
  Control (matched sibling)
  NA
  NA
  14783965
  14849807
  65843
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-13144.s1
  4.9
  M
  Control (matched sibling)
  NA
  NA
  14801038
  14845141
  44104
  GRCh38
  Deletion
  No
  soueid_16_ASD_discovery_controls-control13
  N/A
  N/A
  Control
 
 
  14807708
  15113290
  305583
  GRCh38
  Deletion
  No

Cases

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
 annunziata_21_ASD_discovery_cases-caseIB210
 qPCR, FISH
 
 Paternal
 
 
 MACROD2,AIMP1P1,RNU6-228P,RN7SL864P,FLRT3
 
 bacchelli_20_ASD_discovery_cases-caseAB114
 
 
 Paternal
 Simplex
 
 MACROD2
 
 bacchelli_20_ASD_discovery_cases-caseAB81
 
 
 Paternal
 Simplex
 
 RNA5SP475,MACROD2
 
 brandler_18_ASD_discovery_cases-caseSSC08218
 SNP VCF
 
 De novo
 
 
 RNU6-1159P,RNU6-115P,MACROD2
 
 chehbani_22_ASD_discovery_cases-case18
 
 
 Unknown
 Simplex
 
 MACROD2,MACROD2-AS1
 
 cucinotta_23_ASD_discovery_cases-case284
 
 
 Maternal
 
 
 MACROD2
 
 cucinotta_23_ASD_discovery_cases-case352
 
 
 Paternal
 
 
 MACROD2
 
 cucinotta_23_ASD_discovery_cases-case431
 
 
 Unknown
 
 
 MACROD2
 
 davis_09_ASD_discovery_cases-AU001505
 
 
 Unknown
 Unknown
 Unknown
 MACRO2D
 
 egger_14_ASD_discovery_cases-caseA70
 
 
 Unknown
 
 Unknown
 MACROD2
 
 engchuan_15_ASD_discovery_cases-case14107_1890
 
 
 Unknown
 
 
 RPS10P2,MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case14197_3210
 
 
 Unknown
 
 
 MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case14225_3590
 
 
 Unknown
 
 
 RPS10P2,MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case14259_3820
 
 
 Unknown
 
 
 MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case14299_4200
 
 
 Unknown
 
 
 RPS10P2,MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case14379_4920
 
 
 Unknown
 
 
 RPS10P2,MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case16053_1571164001
 
 
 Unknown
 
 
 RPS10P2,MACROD2
 
 engchuan_15_ASD_discovery_cases-case16097_1571153001
 
 
 Unknown
 
 
 MACROD2
 
 engchuan_15_ASD_discovery_cases-case17035_1
 
 
 Unknown
 
 
 RNU6-1159P,RNU6-115P,MACROD2
 
 engchuan_15_ASD_discovery_cases-case18158_301
 
 
 Unknown
 
 
 MACROD2-IT1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case1951_301
 
 
 Unknown
 
 
 SNRPB2,RNU6-27P,RNU1-131P,OTOR,PCSK2
 
 engchuan_15_ASD_discovery_cases-case20003_1019001
 
 
 Unknown
 
 
 RPS10P2,MACROD2-IT1,MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case20057_1290002
 
 
 Unknown
 
 
 MACROD2
 
 engchuan_15_ASD_discovery_cases-case3194_4
 
 
 Unknown
 
 
 MACROD2
 
 engchuan_15_ASD_discovery_cases-case3425_3
 
 
 Unknown
 
 
 MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case3473_3
 
 
 Unknown
 
 
 MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case3541_2
 
 
 Unknown
 
 
 MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case4017_1
 
 
 Unknown
 
 
 RPS10P2,MACROD2
 
 engchuan_15_ASD_discovery_cases-case4043_1
 
 
 Unknown
 
 
 LINC01722
 
 engchuan_15_ASD_discovery_cases-case4142_1
 
 
 Unknown
 
 
 MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case4157_1
 
 
 Unknown
 
 
 MACROD2
 
 engchuan_15_ASD_discovery_cases-case4239_1
 
 
 Unknown
 
 
 RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case4242_1
 
 
 Unknown
 
 
 RPS10P2,MACROD2
 
 engchuan_15_ASD_discovery_cases-case4427_1
 
 
 Unknown
 
 
 RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case4440_1
 
 
 Unknown
 
 
 LINC01722
 
 engchuan_15_ASD_discovery_cases-case4441_1
 
 
 Unknown
 
 
 MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case5061_3
 
 
 Unknown
 
 
 MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case5244_3
 
 
 Unknown
 
 
 MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case5335_3
 
 
 De novo
 
 
 RPS10P2,MACROD2-IT1,MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case5368_3
 
 
 Unknown
 
 
 MACROD2-AS1,MACROD2
 
 engchuan_15_ASD_discovery_cases-case5523_3
 
 
 Unknown
 
 
 SPTLC3
 
 engchuan_15_ASD_discovery_cases-case6023_3
 
 
 Unknown
 
 
 RNU6-1159P,RNU6-115P,MACROD2
 
 engchuan_15_ASD_discovery_cases-case6375_6
 
 
 Unknown
 
 
 RPS10P2,MACROD2
 
 engchuan_15_ASD_discovery_cases-case6416_3
 
 
 Unknown
 
 
 RPS10P2,MACROD2
 
 engchuan_15_ASD_discovery_cases-case8438_202
 
 
 Unknown
 
 
 RPS10P2,MACROD2
 
 engchuan_15_ASD_discovery_cases-case9610_201
 
 
 Unknown
 
 
 MACROD2-AS1,MACROD2
 
 fitzgerald_14_ASD/DD/ID_discovery_cases-case000019
 
 
 De novo
 Unknown
 Unknown
 MACROD2-AS1,MACROD2
 
 gai_11_ASD_discovery_cases-AU1143301
 
 
 Inherited
 
 
 SNRPB2, OTOR, PCSK2
 
 gai_11_ASD_discovery_cases-AU1158301
 
 
 Inherited
 
 
 SNRPB2, OTOR, PCSK2
 
 gai_11_ASD_discovery_cases-AU1257301
 
 
 Inherited
 
 
 MACROD2 (intronic)
 
 gai_11_ASD_discovery_cases-AU1830302
 
 
 Inherited
 
 
 MACROD2 (intronic)
 
 gai_11_ASD_discovery_cases-AU1830303
 
 
 Inherited
 
 
 MACROD2 (intronic)
 
 gai_11_ASD_replication_cases-AU001505
 
 
 Inherited
 
 
 MACROD2 (intronic)
 
 gai_11_ASD_replication_cases-AU008504
 
 
 Inherited
 
 
 MACROD2 (intronic)
 
 gai_11_ASD_replication_cases-AU008505
 
 
 Inherited
 
 
 MACROD2 (intronic)
 
 gai_11_ASD_replication_cases-AU0934303
 
 
 Inherited
 
 
 MACROD2 (intronic)
 
 gai_11_ASD_replication_cases-AU0934304
 
 
 Inherited
 
 
 MACROD2 (intronic)
 
 girirajan_11_ASD_discovery_cases-Si20
 
 
 Paternal
 Simplex
 
 LINC01723,LINC01722,SPTLC3,ISM1,ISM1-AS1
 
 girirajan_11_ASD_discovery_cases-Si227
 
 
 Unknown
 Simplex
 
 RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
 girirajan_13a_ASD_discovery_cases-11986.p1
 
 
 Unknown
 Simplex
 Unknown
 LINC01723,LINC01722,SPTLC3,ISM1,ISM1-AS1
 
 girirajan_13a_ASD_discovery_cases-13624.p1
 
 
 Unknown
 Simplex
 Unknown
 RPS10P2,RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
 gorker_18_ASD_discovery_cases-case29
 
 
 Unknown
 Unknown
 Unknown
 RPS10P2,MACROD2-AS1,MACROD2
 
 han_22_ASD/DD/ID_discovery_cases-case16D1738
 
 
 Unknown
 
 
 MACROD2,MACROD2-IT1,RNF11P2
 
 hnoonual_17_ASD_discovery_cases-caseRA39
 
 
 Paternal
 
 
 MACROD2-IT1,MACROD2
 
 husson_20_ASD_discovery_cases-case412
 ddPCR, QMPSF, or aCGH
 
 Paternal
 Simplex
 Unknown
 RNU6-278P,RPS3P1,NDUFAF5,ESF1,SEL1L2,TASP1,MACROD2
 
 husson_20_ASD_discovery_cases-case46
 ddPCR, QMPSF, or aCGH
 
 Unknown (not maternal)
 Familial
 Unknown
 MACROD2
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00000982
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Paternal
 Unknown
 Unknown
 RNF11P2,RPS10P2,MACROD2-IT1,MACROD2
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00002672
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Paternal
 Unknown
 Unknown
 NDUFAF5,ESF1,TASP1
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00003772
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Unknown
 Unknown
 Unknown
 LINC01723,LINC01722,SPTLC3,ISM1,ISM1-AS1
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00004822
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Unknown
 Unknown
 Unknown
 AIMP1P1,RN7SL864P,MACROD2
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00005299
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Unknown
 Unknown
 Unknown
 RNU6-278P,RPS3P1,AIMP1P1,RN7SL864P,NDUFAF5,FLRT3,RNU6-228P,ESF1,SEL1L2,MACROD2
 
 kanduri_15_ASD_discovery_cases-case3073
 
 
 Paternal
 Unknown
 Unknown
 MACROD2-AS1 (non-coding RNA, exonic)
 
 krumm_13_ASD_discovery_cases-case13418.p1
 
 
 Maternal
 Simplex
 Not segregated
 SEL1L2
 
 krumm_15_ASD_discovery_cases-case11986.p1
 Illumina 1MDuo
 
 Paternal
 Simplex
 Segregated
 SPTLC3,ISM1,ISM1-AS1
 
 krumm_15_ASD_discovery_cases-case13418.p1
 1M-Duov3
 
 Maternal
 Simplex
 Not segregated (CNV in unaffected sibling)
 SEL1L2
 
 kushima_18_ASD_discovery_cases-caseASD0172
 While a subset of CNVs were reported to have been validated by qPCR in the report, precisely which CNVs were validated was not reported
 
 Unknown
 Simplex
 Unknown
 RNF11P2,MACROD2-IT1,MACROD2
 
 kushima_18_ASD_discovery_cases-caseASD0391
 While a subset of CNVs were reported to have been validated by qPCR in the report, precisely which CNVs were validated was not reported
 
 Unknown
 Simplex
 Unknown
 MACROD2
 
 kushima_18_SCZ_discovery_cases-caseSCZ0052
 While a subset of CNVs were reported to have been validated by qPCR in the report, precisely which CNVs were validated was not reported
 
 Unknown
 Unknown
 
 RPS10P2,MACROD2
 
 kushima_18_SCZ_discovery_cases-caseSCZ2312
 While a subset of CNVs were reported to have been validated by qPCR in the report, precisely which CNVs were validated was not reported
 
 Unknown
 Unknown
 Unknown
 MACROD2-IT1,MACROD2
 
 kushima_22_ASD_discovery_cases-caseASD0172
 qRT-PCR
 
 Unknown
 
 
 MACROD2,MACROD2-IT1,RNF11P2
 
 kushima_22_ASD_discovery_cases-caseASD0391
 qRT-PCR
 
 Unknown
 
 
 MACROD2
 
 kushima_22_BPD_discovery_cases-caseBD0643
 qRT-PCR
 
 Unknown
 
 
 MACROD2,MACROD2-IT1,RNF11P2
 
 kushima_22_BPD_discovery_cases-caseBD1085
 qRT-PCR
 
 Unknown
 
 
 MACROD2,RPS10P2,MACROD2-AS1,RNU6-1159P
 
 kushima_22_BPD_discovery_cases-caseBD1261
 qRT-PCR
 
 Unknown
 
 
 MACROD2,RNU6-115P,RNU6-1159P
 
 kushima_22_BPD_discovery_cases-caseBD1634
 qRT-PCR
 
 Unknown
 
 
 MACROD2
 
 kushima_22_SCZ_discovery_cases-caseSCZ0052
 qRT-PCR
 
 Unknown
 
 
 MACROD2,RPS10P2
 
 kushima_22_SCZ_discovery_cases-caseSCZ2312
 qRT-PCR
 
 Unknown
 
 
 MACROD2,MACROD2-IT1
 
 kushima_22_SCZ_discovery_cases-caseSCZ2692
 qRT-PCR
 
 Unknown
 
 
 MACROD2,MACROD2-IT1
 
 kushima_22_SCZ_discovery_cases-caseSCZ3253
 qRT-PCR
 
 Unknown
 
 
 MACROD2,RPS10P2
 
 leppa_16_ASD_discovery_cases-AU1143301
 
 
 Paternal
 Multiplex
 Not segregated (CNV not present in affected sibling)
 SNRPB2,RNU6-27P,RNU1-131P,OTOR,PCSK2
 
 leppa_16_ASD_discovery_cases-AU1158301
 
 
 Paternal
 Multiplex
 Not segregated (CNV not present in affected sibling)
 SNRPB2,RNU6-27P,RNU1-131P,OTOR,PCSK2
 
 lesca_12_EP_discovery_cases-case10A603
 qPCR
 
 Paternal
 Unknown
 Unknown
 RNF11P2,MACROD2-IT1,MACROD2
 
 lesca_12_EP_discovery_cases-case12-522
 qPCR
 
 Paternal
 Unknown
 Unknown
 MACROD2
 
 levy_11_ASD_discovery_cases-11986.p1
 
 
 Paternal
 Simplex
 Segregated
 LINC01723,LINC01722,SPTLC3,ISM1,ISM1-AS1
 
 lintas_17_ASD_discovery_cases-case11.1
 Validation by visual inspection, RT-PCR, or PCR
 
 Paternal
 Multiplex
 Not segregated (CNV only observed in 1/2 affected siblings)
 RPS10P2,MACROD2
 
 lintas_17_ASD_discovery_cases-case7.1
 Validation by visual inspection, RT-PCR, or PCR
 
 Paternal
 Multiplex
 Not segregated (CNV only observed in 1/2 affected siblings)
 MACROD2-AS1,MACROD2
 
 maini_18_ASD/DD/ID_discovery_cases-case73
 
 
 Paternal
 Simplex
 Unknown
 RPS10P2,RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
 maini_18_ASD/DD/ID_discovery_cases-case_unknown112
 
 
 Paternal
 Unknown
 Unknown
 RNF11P2,RPS10P2,FLRT3,RNU6-228P,MACROD2-IT1,MACROD2-AS1,MACROD2
 
 marshall_08_ASD_discovery_cases-SK0335-003
 qPCR, qmPCR
 
 Unknown
 NA
 NA
 MACROD2
 
 morrow_08_ASD_discovery_cases-case7301
 
 
 Paternal
 NA
 NA
 C20orf133
 
 morrow_08_ASD_discovery_cases-case7801
 
 
 Paternal
 NA
 NA
 C20orf133
 
 mosca_16_DCD_discovery_cases-case103303
 
 
 Unknown
 Unknown
 Unknown
 MACROD2-IT1,MACROD2
 
 oikonomakis_16_ASD_discovery_cases-case4
 
 
 Paternal
 
 
 RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
 oikonomakis_16_ASD_discovery_cases-case472
 
 
 Unknown
 
 
 RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
 oikonomakis_16_ASD_discovery_cases-case477
 
 
 Unknown
 
 
 RNU6-278P,RPS3P1,AIMP1P1,NDUFAF5,ESF1,SEL1L2,TASP1,MACROD2
 
 picinelli_16_ASD/ADHD/DD/ID_discovery_cases-patient6
 
 
 Paternal
 Multi-generational
 Unknown
 RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
 pinto_10_ASD_discovery_cases-case5021_5
 qPCR
 
 paternal
 Multiplex
 Unknown
 MACROD2
 
 pinto_10_ASD_discovery_cases-case5061_3
 qPCR-Maternal,Agilent1M
 
 maternal
 Multiplex
 Not segregated
 MACROD2-AS1,MACROD2
 
 pinto_10_ASD_discovery_cases-case5066_4
 qPCR
 
 maternal
 Multiplex
 Unknown
 MACROD2 intronic
 
 pinto_10_ASD_discovery_cases-case5244_3
 qPCR-Paternal
 
 paternal
 Simplex
 NA
 MACROD2-AS1,MACROD2
 
 pinto_10_ASD_discovery_cases-case5250_4
 qPCR
 
 paternal
 Multiplex
 Unknown
 MACROD2
 
 pinto_10_ASD_discovery_cases-case5335_3
 Agilent1M
 
 De novo
 Simplex
 NA
 RPS10P2,MACROD2-IT1,MACROD2-AS1,MACROD2
 
 pinto_10_ASD_discovery_cases-case5368_3
 Agilent1M
 
 maternal
 NA
 NA
 MACROD2-AS1,MACROD2
 
 pinto_10_ASD_discovery_cases-case5523_3
 Agilent1M
 
 paternal
 NA
 NA
 SPTLC3
 
 pinto_10_ASD_discovery_cases-case6023_3
 qPCR-Maternal
 
 maternal
 Multiplex (sib with PDD-NOS)
 Segregated
 RNU6-1159P,RNU6-115P,MACROD2
 
 prasad_12_ASD_discovery_cases-case122712L
 
 
 Unknown
 Unknown
 Unknown
 SPTLC3
 
 prasad_12_ASD_discovery_cases-case154269L
 
 
 Unknown
 Unknown
 Unknown
 MACROD2
 
 prasad_12_ASD_discovery_cases-case67839
 
 
 Unknown
 Unknown
 Unknown
 0 genes
 
 prasad_12_ASD_discovery_cases-case80022
 
 
 Unknown
 Unknown
 Unknown
 0 genes
 
 sajan_13_ACC/CBLH/PMG_discovery_cases-case1600-0
 Not tested by qPCR
 
 Unknown
 Unknown
 Unknown
 MACROD2-AS1,MACROD2
 
 sajan_13_ACC/CBLH/PMG_discovery_cases-caseLR02-178
 Not tested by qPCR
 
 Unknown
 Unknown
 Unknown
 MACROD2-AS1,MACROD2
 
 sajan_13_ACC/CBLH/PMG_discovery_cases-caseLR04-069
 Not tested by qPCR
 
 Unknown
 Unknown
 Unknown
 MACROD2-AS1,MACROD2
 
 sanders_11_ASD_discovery_cases-11009.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-11040.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2-AS1,MACROD2
 
 sanders_11_ASD_discovery_cases-11057.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 RPS10P2,MACROD2
 
 sanders_11_ASD_discovery_cases-11073.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-11075.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 RNU6-1159P,RNU6-115P,MACROD2
 
 sanders_11_ASD_discovery_cases-11101.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
 sanders_11_ASD_discovery_cases-11122.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-11133.p1
 
 
 Paternal
 Simplex (trio)
 NA
 MACROD2-AS1,MACROD2
 
 sanders_11_ASD_discovery_cases-11145.p1
 
 
 Both parents
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-11229.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-11252.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 RNF11P2,MACROD2-IT1,MACROD2
 
 sanders_11_ASD_discovery_cases-11256.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-11404.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-11415.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2-AS1,MACROD2
 
 sanders_11_ASD_discovery_cases-11447.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11466.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-11468.p1
 
 
 Paternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-11540.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 DSTN
 
 sanders_11_ASD_discovery_cases-11567.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 RPS10P2,MACROD2
 
 sanders_11_ASD_discovery_cases-11568.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 RPLP0P1
 
 sanders_11_ASD_discovery_cases-11568.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-11794.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-11828.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-11920.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-11924.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11962.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11962.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 LINC01722
 
 sanders_11_ASD_discovery_cases-11970.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2-AS1,MACROD2
 
 sanders_11_ASD_discovery_cases-11982.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-11986.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 LINC01723,LINC01722,SPTLC3,ISM1,ISM1-AS1
 
 sanders_11_ASD_discovery_cases-12057.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12072.p1
 
 
 Maternal
 Simplex (quad-proband unmatched)
 Unknown
 MACROD2
 
 sanders_11_ASD_discovery_cases-12119.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-12120.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12170.p1
 
 
 Both parents
 Simplex (quad-proband matched)
 Segregated
 
 
 sanders_11_ASD_discovery_cases-12192.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-12208.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-12255.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-12265.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-12266.p1
 
 
 Paternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-12274.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12330.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-12332.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-12339.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-12354.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-12359.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12369.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-12383.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 RNU6-1159P,RNU6-115P,MACROD2
 
 sanders_11_ASD_discovery_cases-12392.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-12447.p1
 qPCR
 
 De Novo
 Simplex (quad-proband matched)
 Segregated
 RPS10P2,MACROD2
 
 sanders_11_ASD_discovery_cases-12494.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12507.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2-AS1,MACROD2
 
 sanders_11_ASD_discovery_cases-12587.p1
 
 
 Paternal
 Simplex (trio)
 NA
 RPLP0P1
 
 sanders_11_ASD_discovery_cases-12628.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-12629.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-12640.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-12652.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2-AS1,MACROD2
 
 sanders_11_ASD_discovery_cases-12656.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12661.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-12691.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 KIF16B
 
 sanders_11_ASD_discovery_cases-12695.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2-IT1,MACROD2
 
 sanders_11_ASD_discovery_cases-12757.p1
 
 
 Maternal
 Simplex (trio)
 NA
 MACROD2
 
 sanders_11_ASD_discovery_cases-12782.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-12852.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-12921.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-12956.p1
 
 
 Unknown
 Simplex (quad-proband matched)
 Segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-12964.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-12972.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-13007.p1
 
 
 Both parents
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-13007.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-13136.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-13144.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-13152.p1
 
 
 Paternal
 Simplex (quad-proband unmatched)
 Unknown
 
 
 sanders_11_ASD_discovery_cases-13166.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 sanders_11_ASD_discovery_cases-13183.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-13226.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 MACROD2
 
 soueid_16_ASD_discovery_cases-caseBAK39
 
 
 Paternal
 Simplex
 
 RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
 streata_22_ASD/DD/ID_discovery_cases-case102
 
 
 Unknown
 
 
 KIF16B,OTOR,RPLP0P1,MACROD2,PPIAP17,RNU6-27P,SNRPB2,RNU1-131P
 
 wang_18_TS_replication_cases-case25139.p1
 CNV validation not attempted
 
 De novo
 
 
 RPS10P2,MACROD2-AS1,MACROD2
 
 wintle_10_ASD_discovery_cases-AN09402
 Solid phase hybridization (Illumina Human 1M-duo)
 
 Unknown
 Unknown
 Unknown
 MACROD2
 
 xu_08_WAGR/ASD/DD/ID_discovery_cases-caseF14a
 
 
 Unknown
 
 Unknown
 RN7SL864P,FLRT3,MACROD2
 
 zarrei_19_ASD/ADHD/OCD/SCZ_discovery_cases-case1-0415-004
 RT-qPCR or WGS
 
 Unknown
 
 
 MACROD2
 null
 zarrei_19_ASD/ADHD/OCD/SCZ_discovery_cases-case7-0072-003
 RT-qPCR or WGS
 
 Unknown
 
 
 RNU6-1159P,RNU6-115P,MACROD2
 null
 zarrei_19_ASD/ADHD/OCD/SCZ_discovery_cases-caseOCD1115-0625-1325-3
 RT-qPCR or WGS
 
 Unknown
 
 
 MACROD2-IT1,MACROD2
 null
 zhou_19_ASD_discovery_cases-caseAU035503
 qPCR
 
 Unknown
 
 
 RPS3P1,SEL1L2,MACROD2
 

Controls

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
bacchelli_20_ASD_discovery_controls-control10026
 
 
  Unknown
 
 
  MACROD2
 
bacchelli_20_ASD_discovery_controls-control10081
 
 
  Unknown
 
 
  MACROD2
 
bacchelli_20_ASD_discovery_controls-control10112
 
 
  Unknown
 
 
  MACROD2-IT1,MACROD2
 
bacchelli_20_ASD_discovery_controls-control20121
 
 
  Unknown
 
 
  RNF11P2,MACROD2-IT1,MACROD2
 
bacchelli_20_ASD_discovery_controls-control20138
 
 
  Unknown
 
 
  RNU6-278P,RPS3P1,SEL1L2,MACROD2
 
engchuan_15_ASD_discovery_controls-control110036001873_
 
 
  Unknown
 
 
  MACROD2
 
engchuan_15_ASD_discovery_controls-control110036014967_
 
 
  Unknown
 
 
  MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-control110036023109_
 
 
  Unknown
 
 
  RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlB149228_1007853581
 
 
  Unknown
 
 
  RPS10P2,MACROD2
 
engchuan_15_ASD_discovery_controls-controlB228990_1007873300
 
 
  Unknown
 
 
  MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlB269978_1007875858
 
 
  Unknown
 
 
  MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlB294025_1007842040
 
 
  Unknown
 
 
  RNU6-1159P,RNU6-115P,MACROD2
 
engchuan_15_ASD_discovery_controls-controlB347545_0067942603
 
 
  Unknown
 
 
  NDUFAF5,ESF1
 
engchuan_15_ASD_discovery_controls-controlB390299_1007840224
 
 
  Unknown
 
 
  LINC01722
 
engchuan_15_ASD_discovery_controls-controlB407301_1007871721
 
 
  Unknown
 
 
  RPS10P2,MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlB422760_1007840446
 
 
  Unknown
 
 
  MACROD2
 
engchuan_15_ASD_discovery_controls-controlB444871_1007853318
 
 
  Unknown
 
 
  AIMP1P1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlB647111_1007846512
 
 
  Unknown
 
 
  MACROD2
 
engchuan_15_ASD_discovery_controls-controlB658740_1007854250
 
 
  Unknown
 
 
  LINC01722
 
engchuan_15_ASD_discovery_controls-controlB805034_1007875356
 
 
  Unknown
 
 
  RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlB814504_1007872259
 
 
  Unknown
 
 
  MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlB895793_1007844868
 
 
  Unknown
 
 
  MACROD2
 
engchuan_15_ASD_discovery_controls-controlB900846_1007844887
 
 
  Unknown
 
 
  RPS10P2,RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlB906859_1007845326
 
 
  Unknown
 
 
  RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlB928410_0067942587
 
 
  Unknown
 
 
  RPS10P2,MACROD2
 
engchuan_15_ASD_discovery_controls-controlB995629_1007855005
 
 
  Unknown
 
 
  MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900090_900090
 
 
  Unknown
 
 
  MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900104_900104
 
 
  Unknown
 
 
  RNU6-1159P,RNU6-115P,MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900174_900174
 
 
  Unknown
 
 
  ISM1,ISM1-AS1
 
engchuan_15_ASD_discovery_controls-controlHABC_900185_900185
 
 
  Unknown
 
 
  RNA5SP475,MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900211_900211
 
 
  Unknown
 
 
  MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900369_900369
 
 
  Unknown
 
 
  MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900504_900504
 
 
  Unknown
 
 
  MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900520_900520
 
 
  Unknown
 
 
  MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900716_900716
 
 
  Unknown
 
 
  RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900818_900818
 
 
  Unknown
 
 
  RPS10P2,RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900845_900845
 
 
  Unknown
 
 
  MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900877_900877
 
 
  Unknown
 
 
  LINC01722
 
engchuan_15_ASD_discovery_controls-controlHABC_900914_900914
 
 
  Unknown
 
 
  MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900948_900948
 
 
  Unknown
 
 
  RNU6-1159P,RNU6-115P,MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_900990_900990
 
 
  Unknown
 
 
  MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_901245_901245
 
 
  Unknown
 
 
  RPS10P2,MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_902653_902653
 
 
  Unknown
 
 
  RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_902679_902679
 
 
  Unknown
 
 
  RPS10P2,MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_902688_902688
 
 
  Unknown
 
 
  RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
engchuan_15_ASD_discovery_controls-controlHABC_902809_902809
 
 
  Unknown
 
 
  MACROD2-AS1,MACROD2
 
kanduri_15_ASD_discovery_controls-control_split1079
 
 
  Unknown
 
 
  MACROD2 (intronic)
 
kanduri_15_ASD_discovery_controls-control_split1202
 
 
  Unknown
 
 
  MACROD2 (intronic)
 
kanduri_15_ASD_discovery_controls-control_split267
 
 
  Unknown
 
 
  MACROD2 (intronic)
 
krumm_13_ASD_discovery_controls-control13418.s1
 
 
  Maternal
  Simplex
 
  SEL1L2
 
krumm_15_ASD_discovery_controls-control11350.s1
  Illumina 1M
 
  Maternal
 
 
  SEL1L2
 
krumm_15_ASD_discovery_controls-control13418.s1
  1M-Duov3
 
  Maternal
 
 
  SEL1L2
 
kushima_22_ASD/BPD/SCZ_discovery_controls-controlCON3377
  qRT-PCR
 
  Unknown
 
 
  MACROD2,RNU6-115P,RNU6-1159P
 
levy_11_ASD_discovery_controls-11066.s3
 
 
  Maternal
  Simplex
  NA
  RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
nord_11_ASD_discovery_controls-04C28137
 
 
 
 
 
  C20orf7,ESF1
 
sanders_11_ASD_discovery_controls-11009.s1
 
 
  Maternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-11057.s1
 
 
  Paternal
  Simplex (quad)
  NA
  RPS10P2,MACROD2
 
sanders_11_ASD_discovery_controls-11073.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-11101.s1
 
 
  Paternal
  Simplex (quad)
  NA
  RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 
sanders_11_ASD_discovery_controls-11206.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2-AS1,MACROD2
 
sanders_11_ASD_discovery_controls-11216.s1
 
 
  Maternal
  Simplex (quad)
  NA
  RPLP0P1
 
sanders_11_ASD_discovery_controls-11229.s1
 
 
  Maternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-11239.s1
 
 
  Maternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-11252.s1
 
 
  Maternal
  Simplex (quad)
  NA
  RNF11P2,MACROD2-IT1,MACROD2
 
sanders_11_ASD_discovery_controls-11256.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-11270.s1
 
 
  Maternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-11304.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-11415.s1
 
 
  Maternal
  Simplex (quad)
  NA
  MACROD2-AS1,MACROD2
 
sanders_11_ASD_discovery_controls-11447.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11459.s1
 
 
  Maternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-11556.s1
 
 
  Maternal
  Simplex (quad)
  NA
  RPLP0P1
 
sanders_11_ASD_discovery_controls-11644.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-11828.s1
 
 
  Maternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-11839.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11843.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11843.s1
 
 
  Maternal
  Simplex (quad)
  NA
  LINC01722
 
sanders_11_ASD_discovery_controls-11920.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-11933.s1
 
 
  Maternal
  Simplex (quad)
  NA
  RPS10P2,MACROD2
 
sanders_11_ASD_discovery_controls-11959.s1
 
 
  Paternal
  Simplex (quad)
  NA
  RPS10P2,MACROD2
 
sanders_11_ASD_discovery_controls-11982.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-11998.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2-AS1,MACROD2
 
sanders_11_ASD_discovery_controls-12057.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12099.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12198.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2-AS1,MACROD2
 
sanders_11_ASD_discovery_controls-12339.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-12346.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-12359.s1
 
 
  Paternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12507.s1
 
 
  Maternal
  Simplex (quad)
  NA
  MACROD2-AS1,MACROD2
 
sanders_11_ASD_discovery_controls-12610.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-12628.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-12652.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2-AS1,MACROD2
 
sanders_11_ASD_discovery_controls-12661.s1
 
 
  Maternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-12691.s1
 
 
  Maternal
  Simplex (quad)
  NA
  KIF16B
 
sanders_11_ASD_discovery_controls-12852.s1
 
 
  Maternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-12916.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-12937.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-12964.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-13007.s1
 
 
  Both parents
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-13072.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-13136.s1
 
 
  Paternal
  Simplex (quad)
  NA
  MACROD2
 
sanders_11_ASD_discovery_controls-13144.s1
 
 
  Maternal
  Simplex (quad)
  NA
  MACROD2
 
soueid_16_ASD_discovery_controls-control13
 
 
 
 
 
  RNU6-1159P,RNU6-115P,MACROD2-AS1,MACROD2
 

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