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1p34.3CNV Type: Deletion-Duplication


Largest CNV size: 345616 bp

Statistics Box:
Number of Reports: 11



Summary Information

Summary statement in development

Additional Locus Information

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USCS Symbol             NCBI Symbol

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            Decipher Symbol

References

Major Reports

Title
Author, Year
Report Class
CNV Type
An evidence-based approach to establish the functional and clinical significance of copy number variants in intellectual and developmental disabili...
Deletion
Confirmation of chromosomal microarray as a first-tier clinical diagnostic test for individuals with developmental delay, intellectual disability, ...
Deletion
The clinical significance of small copy number variants in neurodevelopmental disorders.
Duplication
Excess of rare, inherited truncating mutations in autism.
Duplication

Minor Reports

Title
Author, Year
Report Class
CNV Type
Multiple recurrent de novo CNVs, including duplications of the 7q11.23 Williams syndrome region, are strongly associated with autism.
Deletion-Duplication
Rare de novo and transmitted copy-number variation in autistic spectrum disorders.
Duplication
A discovery resource of rare copy number variations in individuals with autism spectrum disorder.
Deletion-Duplication
Performance of case-control rare copy number variation annotation in classification of autism.
Deletion
Genome-wide analysis of copy number variations identifies PARK2 as a candidate gene for autism spectrum disorder.
Duplication
Paternally inherited cis-regulatory structural variants are associated with autism.
Deletion
Clinical Targeted Panel Sequencing Analysis in Clinical Evaluation of Children with Autism Spectrum Disorder in China
Duplication

Cases

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 asadollahi_14_NDD_discovery_cases
 Patients screened for rare non-polymorphic exonic CNVs sizing 1-500 kb
 714
 Patients with undiagnosed neurodevelopmental disorders (NDD) with or without further congenital anomalies
 N/A
 N/A
 205000
 0
 1
 1
 battaglia_13_DD/ID/ASD_discovery_cases
 Patients affected by DD/ID/ASD/dysmorphic features of unknown origin observed at the Stella Maris Institute (Pisa, Italy) between May 2004 & December 2011
 349
 34 cases with borderline intellectual disability, 237 cases with mixed intellectual disability, 78 cases with intellectual disability and ASD (cases referred with a provisional diagnosis of ASD evaluated with ADI-R and ADOS-G)
 Range, 5 mos.-19 yrs.
 63.9% Male
 1200000
 1
 0
 1
 brandler_18_ASD_replication_cases
 Affected individuals from MSSNG cohort (1395 cases from 1187 families) and the Simons Simplex 2 (SSC2) cohort (584 cases from simplex quad families)
 1979
 Cases diagnosed with ASD
 N/A
 N/A
 10645
 2
 0
 2
 engchuan_15_ASD_discovery_cases
 Samples from the Autism Genome Project (AGP)
 1892
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 N/A
 85.78% Male
 56570
 2
 0
 2
 hu_22_ASD_discovery_cases
 Patients receiving a diagnosis of ASD in the Department of Child Health Care, Children's Hospital of Fudan University, that were included consecutively from January 2019 to December 2020.
 573
 Cases met criteria for autism spectrum disorder (ASD) using DSM-5 criteria.
 Range, 16 mos.-12.8 yrs. (mean, 3.6 yrs)
 80.1% Male
 1155320
 0
 1
 1
 kaminsky_11_DD/ID/ASD_discovery_cases
 Cases from the International Standards for Cytogenomic Arrays (ISCA) consortium
 15749
 Unexplained developmental delay, intellectual disability, dysmorphic features, multiple congenital anomalies, autism spectrum disorders, or clinical features suggestive of a chromosomal syndrome
 NA
 NA
 260629
 1
 0
 1
 krumm_15_ASD_discovery_cases
 Probands from the Simons Simplex Collection
 2377
 Diagnosis of ASD
 N/A
 N/A
 44092
 0
 1
 1
 levy_11_ASD_discovery_cases
 Autistic probands from 887 families from the Simons Simplex Collection (SSC)
 858
 ASD
 
 87.06% Male
 44675
 0
 1
 1
 prasad_12_ASD_discovery_cases
 Unrelated ASD cases recruited from three Canadian sites (Hospital for Sick Children, McMaster University, and Memorial University of Newfoundland); the majority of cases had been previously genotyped with results published in Marshall et al., 2008 and Pinto et al., 2010. 20 cases from initial cohort of 696 were excluded from further analysis (due to CNVs > 5 Mb).
 676
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS
 NA
 82.84% Male
 48316
 3
 1
 4
 sanders_11_ASD_discovery_cases
 Autistic probands from the Simons Simplex Collection (SSC). 872 probands in quartet families, 272 probands in trios.
 1124
 ASD diagnosis: 89.5% autism; 8.5% PDD-NOS, 2% Asperger syndrome. Mean full-scale IQ 85.1 1.5 (mean verbal IQ, 81.9 1.7; mean non-verbal IQ, 88.4 1.4)
 Mean, 9.1 yrs.
 86.1% Male
 345616
 10
 3
 13
 yin_16_ASD_discovery_cases
 Discovery cohort of ASD cases recruited from the Department of Psychiatry of National Taiwan University Hospital (NTUH), Chang Gung Memorial Hospital (CGMH), Taoyuan, and Taoyuan Mental Hospital (TMH), Taiwan.
 335
 Cases diagnosed with autistic disorder according to DSM-IV and confirmed by using the Chinese version of ADI-R. Cases' autistic behaviors assessed by Social Responsiveness Scale (SRS), and cognitive functions assessed by the Weschler Intelligence Scale for Children-Third Edition (WISC-III) and the Wisconsin Card Sorting Test (WCST).
 Mean, 9.39 4.04 yrs.
 89.3% Male
 52852
 0
 1
 1

Controls

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 engchuan_15_ASD_discovery_controls
 Platform-matched controls from three large studies: SAGE (Study of Addiction Genetics and Environment), Ontario Colorectal Cancer study, and HABC (Health Aging and Body Composition)
 2342
 Controls; subjects had no previous psychiatric history
 N/A
 46.67% Male
 49667
 3
 1
 4
 kaminsky_11_DD/ID/ASD_discovery_controls
 Controls from the International Standards for Cytogenomic Arrays (ISCA) consortium
 10118
 Controls
 NA
 NA
 NA
 NA
 NA
 NA
 krumm_15_ASD_discovery_controls
 Unaffected siblings from quad families from the Simons Simplex Collection
 1786
 Control
 N/A
 N/A
 40037
 0
 1
 1
 levy_11_ASD_discovery_controls
 Unaffected siblings of autistic probands from 887 families from the Simons Simplex Collection (SSC)
 863
 Control
 
 47.97% Male
 0
 0
 0
 0
 poultney_13_ASD_discovery_controls
 Controls matched for European ancestry from NIMH and CEPH retained after filtering (original cohort size of 379 controls)
 260
 Control
 N/A
 47.49% Male (before filtering)
 1476
 1
 0
 1
 prasad_12_ASD_discovery_controls
 PDx controls [1000 DNA samples from reportedly healthy donors (50.2% male) from BioServe (Beltsville, MD)] and 4139 in-house controls previously reported in Krawcak et al. 2006, Stewart et al. 2009, and Bierut et al. 2010. CNVs identified in controls were used to define rare ASD-specific CNVs.
 5139
 Control
 NA
 NA (PDx controls 50.2% male)
 48316
 0
 0
 0
 sanders_11_ASD_discovery_controls
 Matched siblings of autistic probands from the Simons Simplex Collection (SSC).
 872
 Controls
 Mean, 10.0 yrs.
 
 341888
 3
 3
 6
 yin_16_ASD_discovery_controls
 Individuals from the Han Chinese Cell and Genome Bank (HCCGB) in Taiwan
 1093
 Controls
 Mean, 68.07 10.12 yrs.
 48.0% Male
 52852
 0
 0
 0

Cases

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
 asadollahi_14_NDD_discovery_cases
  Predominantly European
 Array SNP
  Affymetrix 6.0, Affymetrix Cytogenetics 2.7, Affymetrix CytoScan HD
 HMM
 Affymetrix ChAS v.1.0.1
 MLPA
 battaglia_13_DD/ID/ASD_discovery_cases
  Italy
 aCGH, array SNP
  BACs aCGH, Agilent 44K, Agilent 180K, Affymetrix 6.0
 
 
 FISH, qPCR
 brandler_18_ASD_replication_cases
  N/A
 WGS
  Illumina HiSeq X10
 ForestSV, Lumpy, Manta, Mobster, SV2
 
 None
 engchuan_15_ASD_discovery_cases
  Caucasian
 Solid phase hybridization
  Illumina 1M
 
 
 None
 hu_22_ASD_discovery_cases
  China
 Targeted gene panel sequencing
  Illumina HiSeq X10
 CANOES, HMZDelFinder
 PICNIC, AnnotSV
 None
 kaminsky_11_DD/ID/ASD_discovery_cases
  NA
 aCGH
  Agilent 44K, Agilent 105K
 
 Feature Extraction, DNA Analytics
 FISH, qPCR, MLPA, aCGH, standard G-banded chromosome analysis
 krumm_15_ASD_discovery_cases
  N/A
 WES
 
 CoNIFER, XHMM
 
 Solid phase hybridization (Illumina 1M, 1 M Duo, or Omni 2.5)
 levy_11_ASD_discovery_cases
 
 aCGH
  NimbleGen HD2
 HMM
 
 
 prasad_12_ASD_discovery_cases
  Canada
 aCGH
  Agilent 1M
 ADM-2, DNAcopy (R Bioconductor)
 DNA Analytics v4.0.85 (Agilent), DNAcopy
 None
 sanders_11_ASD_discovery_cases
  White non-Hispanic, 74.5%; mixed, 9.3%, Asian, 4.3%, White Hispanic, 4.0%, African-American, 3.8%; other, 4.2&
 Solid phase hybridization
  Illumina 1M v1, Illumina 1M v3
 PennCNV, QuantiSNP, GNOSIS
 
 
 yin_16_ASD_discovery_cases
  Han Chinese
 Array SNP
  Affymetrix 6.0
 
 Affymetrix Genotyping Console v.4.1
 None

Controls

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
  engchuan_15_ASD_discovery_controls
  Caucasian
  Solid phase hybridization
  Illumina 1M
 
 
  None
  kaminsky_11_DD/ID/ASD_discovery_controls
  NA
  aCGH
  Agilent 44K, Agilent 105K
 
  Feature Extraction, DNA Analytics
 
  krumm_15_ASD_discovery_controls
  N/A
  WES
 
  CoNIFER, XHMM
 
  Solid phase hybridization (Illumina 1M, 1 M Duo, or Omni 2.5)
  levy_11_ASD_discovery_controls
 
  aCGH
  NimbleGen HD2
  HMM
 
 
  poultney_13_ASD_discovery_controls
  European
  WES
  Agilent SureSelect Human All Exon v.2
  XHMM
 
  qPCR, Sanger sequencing
  prasad_12_ASD_discovery_controls
  NA
  aCGH
  Agilent 1M
  ADM-2, DNAcopy (R Bioconductor)
  DNA Analytics v4.0.85 (Agilent), DNAcopy
 
  sanders_11_ASD_discovery_controls
 
  Solid phase hybridization
  Illumina 1M v1 or Illumina 1M v3
  PennCNV, QuantiSNP, GNOSIS
 
 
  yin_16_ASD_discovery_controls
  Han Chinese
  Array SNP
  Affymetrix 6.0
 
  Affymetrix Genotyping Console v.4.1
  None

Cases

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  asadollahi_14_NDD_discovery_cases-case63153
 2 yrs.
 F
 Developmental delay and epilepsy
 Developmental delay, hypotonia, epilepsy, strabismus
 
 38736339
 38941284
  204946
 GRCh38
 Duplication
 Yes
  battaglia_13_DD/ID/ASD_discovery_cases-case74
 10 yrs.
 M
 Developmental delay/intellectual disability
 Autism: no. Epilepsy: no. Dysmorphic features: yes.
 Moderate DD/ID
 34985865
 36181906
  1196042
 GRCh38
 Deletion
 Yes
  brandler_18_ASD_replication_cases-case2-1134-003
 N/A
 F
 ASD
 Case from MSSNG cohort
 
 39202032
 39212676
  10645
 GRCh38
 Deletion
 No
  brandler_18_ASD_replication_cases-case5-0019-003
 N/A
 M
 ASD
 Case from MSSNG cohort
 
 35970514
 35976218
  5705
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case2284_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 37169903
 37218318
  48416
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case5312_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 37165913
 37222483
  56571
 GRCh38
 Deletion
 No
  hu_22_ASD_discovery_cases-case22
 NA
 M
 ASD
 Case met criteria for ASD using DSM-5.
 
 36508937
 37664256
  1155320
 GRCh38
 Duplication
 No
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00004737
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 37443860
 37704418
  260559
 GRCh38
 Deletion
 Yes
  krumm_15_ASD_discovery_cases-case11404.p1
 N/A
 Male
 ASD
 Proband from the Simons Simplex Collection (SSC). Family type: Quad
 
 37940687
 37984779
  44093
 GRCh38
 Duplication
 Yes
  levy_11_ASD_discovery_cases-11404.p1
 NA
 M
 ASD
 NA
 NA
 37934338
 37979012
  44675
 GRCh38
 Duplication
 No
  prasad_12_ASD_discovery_cases-case117480L
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. Novel CNV
 
 38621391
 38660128
  38738
 Unknown
 Deletion
 No
  prasad_12_ASD_discovery_cases-case125700
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. Novel CNV
 
 34726746
 34758217
  31472
 Unknown
 Duplication
 No
  prasad_12_ASD_discovery_cases-case88794
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. CNV identified by previous SNP microarray study
 
 37407730
 37456045
  48316
 Unknown
 Deletion
 No
  prasad_12_ASD_discovery_cases-case93773L
 NA
 F
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. Novel CNV
 
 39440954
 39448776
  7823
 Unknown
 Deletion
 No
  sanders_11_ASD_discovery_cases-11345.p1
 6.1
 M
 Autism
 NA
 Full-scale IQ, 114; non-verbal IQ, 120; verbal IQ, 100
 37169903
 37222483
  52581
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11393.p1
 8.2
 M
 Autism
 NA
 Full-scale IQ, 28; non-verbal IQ, 37; verbal IQ, 17
 35052945
 35095026
  42082
 GRCh38
 Duplication
 No
  sanders_11_ASD_discovery_cases-11404.p1
 7.3
 M
 Autism
 NA
 Full-scale IQ, 85; non-verbal IQ, 90; verbal IQ, 82
 37934341
 37985240
  50900
 GRCh38
 Duplication
 No
  sanders_11_ASD_discovery_cases-11441.p1
 7.8
 M
 Autism
 NA
 Full-scale IQ, 125; non-verbal IQ, 119; verbal IQ, 126
 38663623
 38671457
  7835
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11654.p1
 8
 F
 Autism
 NA
 Full-scale IQ, 40; non-verbal IQ, 41; verbal IQ, 47
 36964762
 36972779
  8018
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11693.p1
 5.3
 M
 Autism
 NA
 Full-scale IQ, 78; non-verbal IQ, 76; verbal IQ, 88
 37169903
 37218318
  48416
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12008.p1
 7.3
 M
 Autism
 NA
 Full-scale IQ, 115; non-verbal IQ, 106; verbal IQ, 128
 36894521
 36925819
  31299
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12341.p1
 13.8
 M
 Autism
 NA
 Full-scale IQ, 109; non-verbal IQ, 117; verbal IQ, 114
 38296709
 38642325
  345617
 GRCh38
 Duplication
 No
  sanders_11_ASD_discovery_cases-12424.p1
 4.2
 M
 ASD
 NA
 Full-scale IQ, 69; non-verbal IQ, 77; verbal IQ, 65
 35561953
 35581401
  19449
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12472.p1
 5.6
 F
 Autism
 NA
 Full-scale IQ, 106; non-verbal IQ, 101; verbal IQ, 112
 34391523
 34401767
  10245
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12484.p1
 9.4
 M
 Autism
 NA
 Full-scale IQ, 98; non-verbal IQ, 107; verbal IQ, 83
 36965741
 36972779
  7039
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12701.p1
 6.7
 M
 Autism
 NA
 Full-scale IQ, 73; non-verbal IQ, 77; verbal IQ, 74
 34192630
 34197579
  4950
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-13166.p1
 9.1
 M
 Autism
 NA
 Full-scale IQ, 46; non-verbal IQ, 47; verbal IQ, 45
 34192630
 34199618
  6989
 GRCh38
 Deletion
 No
  yin_16_ASD_discovery_cases-case17
 N/A
 N/A
 ASD
 Cases diagnosed with autistic disorder according to DSM-IV and confirmed by using the Chinese version of ADI-R.
 
 35956942
 36009793
  52852
 GRCh38
 Duplication
 No

Controls

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  engchuan_15_ASD_discovery_controls-control110036017937_
  N/A
  N/A
  Control
  No previous psychiatric history
 
  37169903
  37218318
  48416
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB747654_1007844423
  N/A
  N/A
  Control
  No previous psychiatric history
 
  39026790
  39076457
  49668
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900103_900103
  N/A
  N/A
  Control
  No previous psychiatric history
 
  37169903
  37218318
  48416
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_902746_902746
  N/A
  N/A
  Control
  No previous psychiatric history
 
  37169903
  37218318
  48416
  GRCh38
  Deletion
  No
  krumm_15_ASD_discovery_controls-control11404.s1
  N/A
  Male
  Control
  Unaffected sibling from the Simons Simplex Collection (SSC)
 
  37940687
  37980724
  40038
  GRCh38
  Duplication
  Yes
  poultney_13_ASD_discovery_controls-control05C39343A
  N/A
  F
  Control
  NIMH Control (NIMH ID 87777)
 
  36460690
  36462165
  1476
  GRCh38
  Deletion
  Yes
  sanders_11_ASD_discovery_controls-11345.s1
  8
  M
  Control (matched sibling)
  NA
  NA
  37169903
  37222483
  52581
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-11393.s1
  9.1
  M
  Control (matched sibling)
  NA
  NA
  35037506
  35089136
  51631
  GRCh38
  Duplication
  No
  sanders_11_ASD_discovery_controls-11404.s1
  4.7
  M
  Control (matched sibling)
  NA
  NA
  37934341
  37982053
  47713
  GRCh38
  Duplication
  No
  sanders_11_ASD_discovery_controls-11654.s1
  6.3
  F
  Control (matched sibling)
  NA
  NA
  36964665
  36972779
  8115
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12033.s1
  12.2
  M
  Control (matched sibling)
  NA
  NA
  35561953
  35581401
  19449
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-12341.s1
  11.3
  F
  Control (matched sibling)
  NA
  NA
  38296709
  38638597
  341889
  GRCh38
  Duplication
  No

Cases

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
 asadollahi_14_NDD_discovery_cases-case63153
 MLPA
 
 Paternal
 Unknown
 Unknown
 MYCBP,RNU6-605P,RRAGC,GJA9-MYCBP,GJA9,RHBDL2
 
 battaglia_13_DD/ID/ASD_discovery_cases-case74
 FISH or qPCR
 
 De novo
 Unknown
 Unknown
 RPL12P45,EFCAB14P1,RN7SL503P,RPL5P4,ZMYM4-AS1,NCDN,TEKT2,ADPRHL2,ZMYM1,SFPQ,TFAP2E,PSMB2,C1orf216,CLSPN,AGO4,COL8A2,TRAPPC3,ZMYM6,ZMYM4,KIAA0319L,AGO1,AGO3,MAP7D1
 
 brandler_18_ASD_replication_cases-case2-1134-003
 No validation step reported
 
 Maternal
 
 
 MACF1
 
 brandler_18_ASD_replication_cases-case5-0019-003
 No validation step reported
 
 Paternal
 
 
 AGO3
 
 engchuan_15_ASD_discovery_cases-case2284_1
 
 
 Unknown
 
 
 RNU6-636P
 
 engchuan_15_ASD_discovery_cases-case5312_3
 
 
 Unknown
 
 
 RNU6-636P
 
 hu_22_ASD_discovery_cases-case22
 
 
 Unknown
 
 
 GNL2,SNIP1,MEAF6,ZC3H12A,FTH1P1,GRIK3,RSPO1,RPS29P6,MIR4255,FTLP18,RNA5SP43,MIR5581,MIR6732,RNU6-636P,DNALI1
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00004737
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Paternal
 Unknown
 Unknown
 ZC3H12A,MIR6732,MIR5581,FTH1P1,DNALI1,LINC01137,MEAF6,SNIP1,GNL2,C1orf109,CDCA8,RSPO1
 
 krumm_15_ASD_discovery_cases-case11404.p1
 Illumina 1M
 
 Paternal
 Simplex
 Not segregated (CNV in unaffected sibling)
 SF3A3,INPP5B
 
 levy_11_ASD_discovery_cases-11404.p1
 
 
 Paternal
 Simplex
 Segregated
 SF3A3,INPP5B
 
 prasad_12_ASD_discovery_cases-case117480L
 
 
 Unknown
 Unknown
 Unknown
 0 genes
 
 prasad_12_ASD_discovery_cases-case125700
 
 
 Unknown
 Unknown
 Unknown
 0 genes
 
 prasad_12_ASD_discovery_cases-case88794
 
 
 Unknown
 Unknown
 Unknown
 0 genes
 
 prasad_12_ASD_discovery_cases-case93773L
 
 
 Unknown
 Unknown
 Unknown
 MACF1
 
 sanders_11_ASD_discovery_cases-11345.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 RNU6-636P
 
 sanders_11_ASD_discovery_cases-11393.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 RPL12P45,ZMYM1
 
 sanders_11_ASD_discovery_cases-11404.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 SF3A3,INPP5B
 
 sanders_11_ASD_discovery_cases-11441.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Not segregated
 
 
 sanders_11_ASD_discovery_cases-11654.p1
 
 
 Both parents
 Simplex (quad-proband matched)
 Not segregated
 GRIK3
 
 sanders_11_ASD_discovery_cases-11693.p1
 
 
 Paternal
 Simplex (trio)
 NA
 RNU6-636P
 
 sanders_11_ASD_discovery_cases-12008.p1
 
 
 Unknown
 Simplex (trio)
 NA
 GRIK3
 
 sanders_11_ASD_discovery_cases-12341.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 RNU6-753P,LINC01685
 
 sanders_11_ASD_discovery_cases-12424.p1
 
 
 Unknown
 Simplex (quad-proband matched)
 Not segregated
 NCDN,TFAP2E
 
 sanders_11_ASD_discovery_cases-12472.p1
 
 
 Paternal
 Simplex (trio)
 NA
 
 
 sanders_11_ASD_discovery_cases-12484.p1
 
 
 Maternal
 Simplex (quad-proband unmatched)
 Unknown
 GRIK3
 
 sanders_11_ASD_discovery_cases-12701.p1
 
 
 Unknown
 Simplex (quad-proband matched)
 Not segregated
 C1orf94
 
 sanders_11_ASD_discovery_cases-13166.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Segregated
 C1orf94
 
 yin_16_ASD_discovery_cases-case17
 
 
 Unknown
 Unknown
 Unknown
 AGO3
 

Controls

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
engchuan_15_ASD_discovery_controls-control110036017937_
 
 
  Unknown
 
 
  RNU6-636P
 
engchuan_15_ASD_discovery_controls-controlB747654_1007844423
 
 
  Unknown
 
 
  NDUFS5
 
engchuan_15_ASD_discovery_controls-controlHABC_900103_900103
 
 
  Unknown
 
 
  RNU6-636P
 
engchuan_15_ASD_discovery_controls-controlHABC_902746_902746
 
 
  Unknown
 
 
  RNU6-636P
 
krumm_15_ASD_discovery_controls-control11404.s1
  Illumina 1M
 
  Paternal
 
 
  SF3A3,INPP5B
 
poultney_13_ASD_discovery_controls-control05C39343A
  qPCR, Sanger sequencing
 
  Unknown
 
 
  MRPS15
 
sanders_11_ASD_discovery_controls-11345.s1
 
 
  Maternal
  Simplex (quad)
  NA
  RNU6-636P
 
sanders_11_ASD_discovery_controls-11393.s1
 
 
  Maternal
  Simplex (quad)
  NA
  RPL12P45,ZMYM1
 
sanders_11_ASD_discovery_controls-11404.s1
 
 
  Paternal
  Simplex (quad)
  NA
  SF3A3,INPP5B
 
sanders_11_ASD_discovery_controls-11654.s1
 
 
  Both parents
  Simplex (quad)
  NA
  GRIK3
 
sanders_11_ASD_discovery_controls-12033.s1
 
 
  Unknown
  Simplex (quad)
  NA
  NCDN,TFAP2E
 
sanders_11_ASD_discovery_controls-12341.s1
 
 
  Paternal
  Simplex (quad)
  NA
  RNU6-753P,LINC01685
 

No Animal Model Data Available
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