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14q24.2CNV Type: Deletion-Duplication


Largest CNV size: 53675 bp

Statistics Box:
Number of Reports: 10



Summary Information

Summary statement in development

Additional Locus Information

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References

Major Reports

Title
Author, Year
Report Class
CNV Type
Intragenic rearrangements in NRXN1 in three families with autism spectrum disorder, developmental delay, and speech delay.
Duplication
An evidence-based approach to establish the functional and clinical significance of copy number variants in intellectual and developmental disabili...
Duplication
Cryptic chromosome rearrangements in five patients, with normal and/or abnormal karyotypes, associated with mental retardation, autism and/or epile...
Deletion
Both rare and de novo copy number variants are prevalent in agenesis of the corpus callosum but not in cerebellar hypoplasia or polymicrogyria.
Duplication
Excess of rare, inherited truncating mutations in autism.
Deletion

Minor Reports

Title
Author, Year
Report Class
CNV Type
Multiple recurrent de novo CNVs, including duplications of the 7q11.23 Williams syndrome region, are strongly associated with autism.
Deletion-Duplication
A discovery resource of rare copy number variations in individuals with autism spectrum disorder.
Deletion-Duplication
Refinement and discovery of new hotspots of copy-number variation associated with autism spectrum disorder.
Duplication
Identification of small exonic CNV from whole-exome sequence data and application to autism spectrum disorder.
Duplication
Performance of case-control rare copy number variation annotation in classification of autism.
Deletion-Duplication

Cases

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 cabras_12_ASD/MR/EP_discovery_cases
 Patients with normal and/or abnormal karyotypes and dysmorphic features, associated with mental retardation, autism, and/or epilepsy
 10
 ASD, mental retardation (MR), and/or epilepsy (EP)
 NA
 NA
 26000
 1
 0
 1
 engchuan_15_ASD_discovery_cases
 Samples from the Autism Genome Project (AGP)
 1892
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 N/A
 85.78% Male
 350066
 1
 5
 6
 girirajan_13a_ASD_discovery_cases
 1979 simplex cases from the Simons Simplex Collection (SSC), 579 multiplex cases from AGRE.
 2588
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 NA
 NA
 304000
 0
 1
 1
 kaminsky_11_DD/ID/ASD_discovery_cases
 Cases from the International Standards for Cytogenomic Arrays (ISCA) consortium
 15749
 Unexplained developmental delay, intellectual disability, dysmorphic features, multiple congenital anomalies, autism spectrum disorders, or clinical features suggestive of a chromosomal syndrome
 NA
 NA
 920190
 0
 2
 2
 krumm_15_ASD_discovery_cases
 Probands from the Simons Simplex Collection
 2377
 Diagnosis of ASD
 N/A
 N/A
 12912
 1
 0
 1
 poultney_13_ASD_discovery_cases
 ASD cases of European ancestry from AGRE retained after filtering (original cohort size of 432 cases)
 299
 Cases diagnosed with ASD
 N/A
 79.86% Male (before filtering)
 8237
 0
 2
 2
 prasad_12_ASD_discovery_cases
 Unrelated ASD cases recruited from three Canadian sites (Hospital for Sick Children, McMaster University, and Memorial University of Newfoundland); the majority of cases had been previously genotyped with results published in Marshall et al., 2008 and Pinto et al., 2010. 20 cases from initial cohort of 696 were excluded from further analysis (due to CNVs > 5 Mb).
 676
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS
 NA
 82.84% Male
 21133
 1
 2
 3
 sajan_13_ACC/CBLH/PMG_discovery_cases
 Individuals with severe congenital brain malformations [agenesis of the corpus callosum (ACC), cerebellar hypoplasia (CBLH), and/or polymicrogyria (PMG)] and additional neurodevelopmental phenotypes
 487
 Diagnosis of agenesis of the corpus callosum (ACC), cerebellar hypoplasia (CBLH), and/or polymicrogyria (PMG); additional diagnoses of autism spectrum disorder (ASD), developmental delay (DD), intellectual disability (ID) and/or seizures in some patients
 N/A
 N/A
 44406
 0
 1
 1
 sanders_11_ASD_discovery_cases
 Autistic probands from the Simons Simplex Collection (SSC). 872 probands in quartet families, 272 probands in trios.
 1124
 ASD diagnosis: 89.5% autism; 8.5% PDD-NOS, 2% Asperger syndrome. Mean full-scale IQ 85.1 1.5 (mean verbal IQ, 81.9 1.7; mean non-verbal IQ, 88.4 1.4)
 Mean, 9.1 yrs.
 86.1% Male
 53675
 3
 1
 4
 wisniowiecka-kowalnik_10_ASD_discovery_cases
 Autistic probands from three families with intragenic rearrangements within the NRXN1 gene
 3
 Diagnosis of ASD made using ADOS and/or ADI-R.
 Range, 4-36 yrs.
 33.3% Male
 NA
 0
 1
 1

Controls

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 engchuan_15_ASD_discovery_controls
 Platform-matched controls from three large studies: SAGE (Study of Addiction Genetics and Environment), Ontario Colorectal Cancer study, and HABC (Health Aging and Body Composition)
 2342
 Controls; subjects had no previous psychiatric history
 N/A
 46.67% Male
 447785
 1
 4
 5
 kaminsky_11_DD/ID/ASD_discovery_controls
 Controls from the International Standards for Cytogenomic Arrays (ISCA) consortium
 10118
 Controls
 NA
 NA
 NA
 NA
 NA
 NA
 krumm_15_ASD_discovery_controls
 Unaffected siblings from quad families from the Simons Simplex Collection
 1786
 Control
 N/A
 N/A
 20426
 0
 1
 1
 nord_11_ASD_discovery_controls
 Samples from 367 total control individuals (319 European American, 48 African American) used to test for differences in rare CNV prevalence compared with autism cases
 123
 Controls (no history of psychiatric symptoms by self-report)
 30 yrs.
 
 139343
 0
 1
 1
 poultney_13_ASD_discovery_controls
 Controls matched for European ancestry from NIMH and CEPH retained after filtering (original cohort size of 379 controls)
 260
 Control
 N/A
 47.49% Male (before filtering)
 0
 0
 0
 0
 prasad_12_ASD_discovery_controls
 PDx controls [1000 DNA samples from reportedly healthy donors (50.2% male) from BioServe (Beltsville, MD)] and 4139 in-house controls previously reported in Krawcak et al. 2006, Stewart et al. 2009, and Bierut et al. 2010. CNVs identified in controls were used to define rare ASD-specific CNVs.
 5139
 Control
 NA
 NA (PDx controls 50.2% male)
 21133
 0
 0
 0
 sanders_11_ASD_discovery_controls
 Matched siblings of autistic probands from the Simons Simplex Collection (SSC).
 872
 Controls
 Mean, 10.0 yrs.
 
 18588
 0
 3
 3
 stamouli_18_ASD/NDD_discovery_controls
  NA NA
 Unaffected individuals from 100 twin pairs (69 monozygotic, 31 dizygotic), corresponding to 97 families, that were enriched for neurodevelopmental disorders from the Roots of Autism and ADHD Study in Sweden (RATSS)
 100 twin pairs
 Control (unaffected) individual following evaluation using standard diagnostic tools [a psychosocial and anamnestic interview, the Autism Diagnosis Interview-Revised (ADI-R), the Autism Diagnostic Observation Schedule Second Edition (ADOS-2), the Kiddie Schedule for Affective Disorders and Schizophrenia (K-SADS), or the Diagnostic Interview for ADHD in Adults (DIVA)]; Wechsler Intelligence Scale for Children or Adults, Fourth Edition (WISC-IV) or the Leiter-revised scales in combination with the Peabody Picture Vocabulary Test, Third Edition, and the parent-based Adaptive Behavior Assessment Scale, 2nd Edition (ABAS-2) were also used to evaluate adaptive, cognitive, and verbal abilities and
 N/A
 N/A
 20710
 0
 2
 2

Cases

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
 cabras_12_ASD/MR/EP_discovery_cases
  European
 aCGH
  BACs aCGH (Cytochips Bluegnome)
 
 Bluefuse Cytochip software
 FISH
 engchuan_15_ASD_discovery_cases
  Caucasian
 Solid phase hybridization
  Illumina 1M
 
 
 None
 girirajan_13a_ASD_discovery_cases
  NA
 aCGH
  Custom microarray with a high density of probes targeted to 1,367 regions with a susceptible genomic architecture
 ADM-2
 Agilent Genomic Workbench
 None
 kaminsky_11_DD/ID/ASD_discovery_cases
  NA
 aCGH
  Agilent 44K, Agilent 105K
 
 Feature Extraction, DNA Analytics
 FISH, qPCR, MLPA, aCGH, standard G-banded chromosome analysis
 krumm_15_ASD_discovery_cases
  N/A
 WES
 
 CoNIFER, XHMM
 
 Solid phase hybridization (Illumina 1M, 1 M Duo, or Omni 2.5)
 poultney_13_ASD_discovery_cases
  European
 WES
  Agilent SureSelect Human All Exon v.2
 XHMM
 
 None
 prasad_12_ASD_discovery_cases
  Canada
 aCGH
  Agilent 1M
 ADM-2, DNAcopy (R Bioconductor)
 DNA Analytics v4.0.85 (Agilent), DNAcopy
 None
 sajan_13_ACC/CBLH/PMG_discovery_cases
  81.31% Caucasian
 Solid phase hybridization
  Illumina InfiniumII HumanHap610
 PennCNV
 
 qPCR
 sanders_11_ASD_discovery_cases
  White non-Hispanic, 74.5%; mixed, 9.3%, Asian, 4.3%, White Hispanic, 4.0%, African-American, 3.8%; other, 4.2&
 Solid phase hybridization
  Illumina 1M v1, Illumina 1M v3
 PennCNV, QuantiSNP, GNOSIS
 
 
 wisniowiecka-kowalnik_10_ASD_discovery_cases
  NA
 aCGH
  BCM MGL/Agilent oligo aCGH (CMA V6.3 OLIGO, V6.4 OLIGO, V6.5 OLIGO)
 
 
 aCGH

Controls

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
  engchuan_15_ASD_discovery_controls
  Caucasian
  Solid phase hybridization
  Illumina 1M
 
 
  None
  kaminsky_11_DD/ID/ASD_discovery_controls
  NA
  aCGH
  Agilent 44K, Agilent 105K
 
  Feature Extraction, DNA Analytics
 
  krumm_15_ASD_discovery_controls
  N/A
  WES
 
  CoNIFER, XHMM
 
  Solid phase hybridization (Illumina 1M, 1 M Duo, or Omni 2.5)
  nord_11_ASD_discovery_controls
 
  aCGH
  NimbleGen HD2
  Sliding-window algorithm, ~10 kb minumum size threshold
 
  None
  poultney_13_ASD_discovery_controls
  European
  WES
  Agilent SureSelect Human All Exon v.2
  XHMM
 
 
  prasad_12_ASD_discovery_controls
  NA
  aCGH
  Agilent 1M
  ADM-2, DNAcopy (R Bioconductor)
  DNA Analytics v4.0.85 (Agilent), DNAcopy
 
  sanders_11_ASD_discovery_controls
 
  Solid phase hybridization
  Illumina 1M v1 or Illumina 1M v3
  PennCNV, QuantiSNP, GNOSIS
 
 
  stamouli_18_ASD/NDD_discovery_controls
  Swedish
  Solid phase hybridization
  Illumina Infinium PsychArray-24 v1.1
  PennCNV, QuantiSNP, iPattern, iPsychCNV
 
  None

Cases

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  cabras_12_ASD/MR/EP_discovery_cases-case2
 11 yrs.
 M
 Mental retardation and epilepsy
 Epilepsy, dysmorphic features
 Mental retardation
 71439536
 71465495
  26000
 Unknown
 Deletion
 Yes
  engchuan_15_ASD_discovery_cases-case14045_780
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 72900678
 73250744
  350067
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case14173_2800
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 73005615
 73088463
  82849
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case20032_1226001
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 72830235
 72926131
  95897
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case4398_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 71773048
 71812883
  39836
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case8649_201
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 71458612
 71496711
  38100
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case8705_201
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 72911793
 73074228
  162436
 GRCh38
 Duplication
 No
  girirajan_13a_ASD_discovery_cases-AU002804
 N/A
 N/A
 ASD
 Diagnosis of ASD based on meeting criteria on the Autism Diagnostic Observation Schedule (ADOS) and on the Autism Diagnostic Interview, Revised (ADI-R)
 N/A
 70353530
 70653530
  300001
 GRCh38
 Duplication
 No
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00002078
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 71647101
 72567300
  920200
 GRCh38
 Duplication
 Yes
  kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00002114
 NA
 NA
 Developmental delay/intellectual disability/ASD
 Clinical profile NA
 Cognitive profile NA
 71647101
 72567300
  920200
 GRCh38
 Duplication
 Yes
  krumm_15_ASD_discovery_cases-case11480.p1
 N/A
 Male
 ASD
 Proband from the Simons Simplex Collection (SSC). Family type: Trio
 
 72276131
 72289043
  12913
 GRCh38
 Deletion
 Yes
  poultney_13_ASD_discovery_cases-case05HI3710A
 N/A
 M
 ASD
 ASD case from AGRE (AGRE ID AU1419302; NDAR ID NDAR_INVVT259HAE)
 
 73099665
 73107901
  8237
 GRCh38
 Duplication
 No
  poultney_13_ASD_discovery_cases-case98HI0027A
 N/A
 F
 ASD
 ASD case from AGRE (AGRE ID AU028503; NDAR ID NDAR_INVXL501PFH)
 
 73099665
 73107901
  8237
 GRCh38
 Duplication
 No
  prasad_12_ASD_discovery_cases-case103021L
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. Novel CNV
 
 72421959
 72443091
  21133
 Unknown
 Duplication
 No
  prasad_12_ASD_discovery_cases-case72816L
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. Novel CNV
 
 71937224
 71945712
  8489
 Unknown
 Duplication
 No
  prasad_12_ASD_discovery_cases-case99795
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. CNV identified by previous SNP microarray study
 
 70218194
 70233026
  14833
 Unknown
 Deletion
 No
  sajan_13_ACC/CBLH/PMG_discovery_cases-case1020-0
 N/A
 F
 ACC-CBLH
 Diagnosis of agenesis of the corpus callosum (ACC) and cerebellar hypoplasia (CBLH). ASD: no. Seizures: no. Brain imaging: complete ACC, normal pituitary gland, large ventricule size, present Probst bundles, decreased white matter volume, and abnormal myelination observed on brain MRI.
 Developmental delay: yes. Intellectual disability: yes.
 70424753
 70469158
  44406
 GRCh38
 Duplication
 Yes
  sanders_11_ASD_discovery_cases-11480.p1
 7.9
 M
 Autism
 NA
 Full-scale IQ, 35; non-verbal IQ, 41; verbal IQ, 24
 72274978
 72328653
  53676
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11538.p1
 5.8
 M
 Autism
 NA
 Full-scale IQ, 88; non-verbal IQ, 93; verbal IQ, 85
 70488527
 70497091
  8565
 GRCh38
 Duplication
 No
  sanders_11_ASD_discovery_cases-12036.p1
 9.6
 M
 Autism
 NA
 Full-scale IQ, 52; non-verbal IQ, 54; verbal IQ, 48
 70683704
 70695750
  12047
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-12395.p1
 5.2
 M
 Autism
 NA
 Full-scale IQ, 85; non-verbal IQ, 91; verbal IQ, 81
 72404136
 72408263
  4128
 GRCh38
 Deletion
 No
  wisniowiecka-kowalnik_10_ASD_discovery_cases-family3patientII-2
 7 yrs. 5 mos.
 F
 ASD
 Clinical diagnosis of PDD-NOS at 3 years of age. ADOS evaluation at 7 yrs 5 mos.: met diagnostic cutoffs for autism. ADI-R evaluation: did not meet diagnostic criteria for autism or ASD (unreliability of mother as informant may have affected the outcome of this measure). Birth/neonatal history: first live born child, product of uncomplicated pregnancy. Developmental milestones: continued progress in all areas (increased vocabulary and social interaction). Motor and musculoskeletal evaluation: slight truncal hypotonia. Dysmorphic features: prominent forehead, bitemporal narrowing, prominent midface hypoplasia with decreased intercanthal bilateral distance, mild epicanthal folds, flat nasal bridge, slightly large ears with unusual helix with decreased antihelix and smooth border with prominent helical curve, somewhat short neck, prominent gynecomastia with inverted nipples, some mild truncal obesity, very small hands and fingers with puffy dorsum of the hand, pes cavum with very prominent puffy dorsum of foot and short toes. Growth parameters: height, 78th %ile; weight, 90th %ile; head circumference of 51.5 cm (80th %ile). Family history: mother with reports of atypical behaviors (intermitting mouthing of objects and food-hoarding); father with dyslexia and multiple psychiatric issues; younger maternal half-brother with speech delay but normal gross motor development and no other major medical issues.
 
 NA (72232861-72234122)
 NA (72695291-72696109)
  NA (approximate size of 463000 bp)
 Unknown
 Duplication
 Yes

Controls

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  engchuan_15_ASD_discovery_controls-controlB807498_1007874668
  N/A
  N/A
  Control
  No previous psychiatric history
 
  72868461
  73316246
  447786
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlHABC_900335_900335
  N/A
  N/A
  Control
  No previous psychiatric history
 
  70484517
  70545017
  60501
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlHABC_901137_901137
  N/A
  N/A
  Control
  No previous psychiatric history
 
  72595720
  72656668
  60949
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlHABC_902554_902554
  N/A
  N/A
  Control
  No previous psychiatric history
 
  71458612
  71574741
  116130
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_902634_902634
  N/A
  N/A
  Control
  No previous psychiatric history
 
  70474049
  70545017
  70969
  GRCh38
  Duplication
  No
  krumm_15_ASD_discovery_controls-control14333.s1
  N/A
  Male
  Control
  Unaffected sibling from the Simons Simplex Collection (SSC)
 
  73099379
  73119805
  20427
  GRCh38
  Duplication
  Yes
  nord_11_ASD_discovery_controls-04C27265
 
 
  Control
 
 
  70797464
  70936806
  139343
  Unknown
  Duplication
 
  sanders_11_ASD_discovery_controls-11524.s1
  17.3
  M
  Control (matched sibling)
  NA
  NA
  71812883
  71831471
  18589
  GRCh38
  Duplication
  No
  sanders_11_ASD_discovery_controls-11538.s1
  9.2
  M
  Control (matched sibling)
  NA
  NA
  70488527
  70497091
  8565
  GRCh38
  Duplication
  No
  sanders_11_ASD_discovery_controls-12541.s1
  8.3
  M
  Control (matched sibling)
  NA
  NA
  70488527
  70497091
  8565
  GRCh38
  Duplication
  No
  stamouli_18_ASD/NDD_discovery_controls-family45_Twin_2
  N/A
  N/A
  Control
  Control is from a monozygotic twin pair from the Discordant NDD diagnostic subgroup
 
  73251012
  73265395
  14384
  GRCh38
  Duplication
  No
  stamouli_18_ASD/NDD_discovery_controls-family47_Twin_1
  N/A
  N/A
  Control
  Control is from a monozygotic twin pair from the Discordant NDD diagnostic subgroup
 
  73244686
  73265395
  20710
  GRCh38
  Duplication
  No

Cases

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
 cabras_12_ASD/MR/EP_discovery_cases-case2
 FISH
 
 De novo
 Unknown
 Possibly segregated
 PCNX
 
 engchuan_15_ASD_discovery_cases-case14045_780
 
 
 Unknown
 
 
 RN7SL586P,RNU6-419P,DCAF4,RBM25,ZFYVE1,PSEN1,PAPLN
 
 engchuan_15_ASD_discovery_cases-case14173_2800
 
 
 Unknown
 
 
 RN7SL586P,RBM25,ZFYVE1
 
 engchuan_15_ASD_discovery_cases-case20032_1226001
 
 
 Unknown
 
 
 DPF3
 
 engchuan_15_ASD_discovery_cases-case4398_1
 
 
 Unknown
 
 
 
 
 engchuan_15_ASD_discovery_cases-case8649_201
 
 
 Unknown
 
 
 SIPA1L1
 
 engchuan_15_ASD_discovery_cases-case8705_201
 
 
 Unknown
 
 
 RN7SL586P,DCAF4,RBM25,ZFYVE1
 
 girirajan_13a_ASD_discovery_cases-AU002804
 
 
 Unknown
 Multiplex
 Unknown
 RNU2-51P,ADAM21,RNU6-659P,KRT18P7,RN7SL77P,COX16,ADAM20P1,ADAM20,MED6,SYNJ2BP-COX16,SYNJ2BP,TTC9
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00002078
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Unknown
 Unknown
 Unknown
 MIR7843,SIPA1L1,RGS6
 
 kaminsky_11_DD/ID/ASD_discovery_cases-ISCA00002114
 FISH, qPCR, MLPA, aCGH, or standard G-banded chromosome analysis
 
 Unknown
 Unknown
 Unknown
 MIR7843,SIPA1L1,RGS6
 
 krumm_15_ASD_discovery_cases-case11480.p1
 Illumina 1MDuo
 
 Maternal
 Simplex
 Segregated
 RGS6
 
 poultney_13_ASD_discovery_cases-case05HI3710A
 
 
 Unknown
 Unknown (likely multiplex/AGRE)
 Unknown
 RBM25
 
 poultney_13_ASD_discovery_cases-case98HI0027A
 
 
 Unknown
 Unknown (likely multiplex/AGRE)
 Unknown
 RBM25
 
 prasad_12_ASD_discovery_cases-case103021L
 
 
 Unknown
 Unknown
 Unknown
 DPF3
 
 prasad_12_ASD_discovery_cases-case72816L
 
 
 Unknown
 Multiplex
 Unknown
 RGS6
 
 prasad_12_ASD_discovery_cases-case99795
 
 
 Unknown
 Unknown
 Unknown
 0 genes
 
 sajan_13_ACC/CBLH/PMG_discovery_cases-case1020-0
 qPCR
 
 De novo
 Unknown
 Unknown
 ADAM21,ADAM20P1
 
 sanders_11_ASD_discovery_cases-11480.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Segregated
 RGS6
 
 sanders_11_ASD_discovery_cases-11538.p1
 
 
 Both parents
 Simplex (quad-proband matched)
 Segregated
 RNU6-659P
 
 sanders_11_ASD_discovery_cases-12036.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Segregated
 
 
 sanders_11_ASD_discovery_cases-12395.p1
 
 
 Maternal
 Simplex (trio)
 NA
 RGS6
 
 wisniowiecka-kowalnik_10_ASD_discovery_cases-family3patientII-2
 aCGH
 
 Maternal
 Simplex (for ASD)
 Unknown
 DPF3, DCAF4, ZFYVE1, RBM25, PSEN1
 

Controls

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
engchuan_15_ASD_discovery_controls-controlB807498_1007874668
 
 
  Unknown
 
 
  RN7SL586P,RNU6-419P,DCAF4,RBM25,DPF3,ZFYVE1,PSEN1,PAPLN,NUMB
 
engchuan_15_ASD_discovery_controls-controlHABC_900335_900335
 
 
  Unknown
 
 
  RNU6-659P,ADAM20
 
engchuan_15_ASD_discovery_controls-controlHABC_901137_901137
 
 
  Unknown
 
 
  DPF3
 
engchuan_15_ASD_discovery_controls-controlHABC_902554_902554
 
 
  Unknown
 
 
  SIPA1L1
 
engchuan_15_ASD_discovery_controls-controlHABC_902634_902634
 
 
  Unknown
 
 
  RNU6-659P,ADAM20P1,ADAM20
 
krumm_15_ASD_discovery_controls-control14333.s1
  Omni2.5-4v1
 
  Paternal
 
 
  RBM25
 
nord_11_ASD_discovery_controls-04C27265
 
 
 
 
 
  0 genes
 
sanders_11_ASD_discovery_controls-11524.s1
 
 
  Maternal
  Simplex (quad)
  NA
 
 
sanders_11_ASD_discovery_controls-11538.s1
 
 
  Paternal
  Simplex (quad)
  NA
  RNU6-659P
 
sanders_11_ASD_discovery_controls-12541.s1
 
 
  Maternal
  Simplex (quad)
  NA
  RNU6-659P
 
stamouli_18_ASD/NDD_discovery_controls-family45_Twin_2
 
 
  Unknown
  Simplex
 
  PAPLN
 
stamouli_18_ASD/NDD_discovery_controls-family47_Twin_1
 
 
  Unknown
  Simplex
 
  RNU6-419P,PAPLN
 

No Animal Model Data Available
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