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12p13.2CNV Type: Deletion-Duplication


Largest CNV size: 45454 bp

Statistics Box:
Number of Reports: 15



Summary Information

Summary statement in development

Additional Locus Information

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USCS Symbol             NCBI Symbol

Decipher

            Decipher Symbol

References

Major Reports

Title
Author, Year
Report Class
CNV Type
Structural variation of chromosomes in autism spectrum disorder.
Duplication
Functional impact of global rare copy number variation in autism spectrum disorders.
Deletion
Evaluation of copy number variations reveals novel candidate genes in autism spectrum disorder-associated pathways.
Deletion

Minor Reports

Title
Author, Year
Report Class
CNV Type
Identifying autism loci and genes by tracing recent shared ancestry.
Duplication
Multiple recurrent de novo CNVs, including duplications of the 7q11.23 Williams syndrome region, are strongly associated with autism.
Deletion-Duplication
Use of array CGH to detect exonic copy number variants throughout the genome in autism families detects a novel deletion in TMLHE.
Deletion
SHANK1 Deletions in Males with Autism Spectrum Disorder.
Deletion
A discovery resource of rare copy number variations in individuals with autism spectrum disorder.
Deletion-Duplication
Transmission disequilibrium of small CNVs in simplex autism.
Duplication
Identification of small exonic CNV from whole-exome sequence data and application to autism spectrum disorder.
Duplication
Both rare and de novo copy number variants are prevalent in agenesis of the corpus callosum but not in cerebellar hypoplasia or polymicrogyria.
Deletion
Performance of case-control rare copy number variation annotation in classification of autism.
Deletion
12p deletion spectrum syndrome: a new case report reinforces the evidence regarding the potential relationship to autism spectrum disorder and rela...
Deletion
NA
Duplication
NA
Deletion

Cases

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 celestino-soper_11_ASD_discovery_cases
 ASD probands from Simons Simplex Collection (SSC) trios. 90 of the probands in this study were also used in the Sanders et al. 2011 CNV report.
 99
 ASD
 
 87.88% Male
 163
 1
 0
 1
 digregorio_17_DD/ID_discovery_cases
  NA NA
 Consecutive cases examined in the Medical Genetics Unit at the "Citta della Salte e della Scienza" University Hospital (Turin, Italy) from 2008 to 2014 (cases with CNVs are present in DECIPHER database)
 1015
 Cases diagnosed with idiopathic developmental delay and/or intellectual disability (DD/ID)
 N/A
 N/A
 629000
 0
 1
 1
 engchuan_15_ASD_discovery_cases
 Samples from the Autism Genome Project (AGP)
 1892
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 N/A
 85.78% Male
 81549
 23
 0
 23
 griswold_12_ASD_discovery_cases
 Unrelated ASD cases from the Collaborative Autism Project (CAP) ascertained through clinical groups at the University of Miami (HIHG), the University of South Carolina, and Vanderbilt University. 260 cases from multiplex families, 483 from simplex families, 62 from families with siblings having autistic-like traits without a confirmed ASD diagnosis, and 8 from families with monozygotic twins.
 813
 Daignosis of ASD/autism. Inclusion criteria: (1) age between 3-21 years, (2) presumptive clinical diagnosis of autism, (3) expert clinical determination of autism diagnosis using DSM-IV criteria supported by ADI-R in the majority of cases and all available clinical information, (4) minimal developmental level of 18 months as determined by VABS or VABS-II or IQ equivalent >35. Exclusion criteria: severe sensory problems, significant motor impairments, or previously identified metabolic, genetic, or progressive neurological disorder.
 Range, 3-21 yrs.
 NA
 84111
 1
 0
 1
 krumm_13_ASD_discovery_cases
 Probands from quad families ascertained as part of the Simons Simplex Collection (SSC); CNVs detected using data from four previously published exome sequencing studies (O'Roak et al., 2011; Iossifov et al., 2012; O'Roak et al., 2012; Sanders et al., 2012)
 411
 Diagnosis of ASD. Social Responsiveness Scale (SRS) used as a quantitative measure of social deficits
 N/A
 81.265% Male
 4811
 0
 1
 1
 leyser_16_ASD/DD_discovery_cases
 4-year-old male patient with 12p13.2 deletion identified by G-banded karyotyping
 1
 Diagnosis of ASD according to DSM-5 criteria with an overall CARS score of 44 (within severe range of ASD); case also presented with developmental delay.
 4 yrs.
 Male
 N/A
 1
 0
 1
 maini_18_ASD/DD/ID_discovery_cases
  NA NA
 Patients evaluated at the Clinical Genetics Unit of Arcispedale Santa Maria Nuova, AUSL-IRCCS of Reggio Emilia that were investigated through aCGH between 2005 and 2016
 293
 Cases presented with one or more neurodevelopmental disorders (NDD), multiple congenital anomalies (MCA), and/or dysmorphic features. Most frequent neurodevelopmental diagnoses include language delay (78.5%), intellectual disability (66.4%), motor delay (50.7%), and ASD (13.9%); dysmorphic features were also frequently observed (52.7%)
 Mean age, 7 yrs. (range, 1 mo.-29 yrs.)
 57.5% Male
 300000
 1
 0
 1
 marshall_08_ASD_discovery_cases
 Cohort of ASD families (237 simplex, 189 mulitplex) recruited from the Hospital for Sick Children, McMaster Univ., Memorial Univ., and other sites
 427
 ASD
 
 
 14218
 0
 1
 1
 morrow_08_ASD_discovery_cases
 Affected individuals from 70 families (52 simplex, 18 multiplex) recruited by Homozygosity Mapping Collaborative for Autism (HMCA) used in CNV analysis. This cohort was selected from an original population of affected individuals from 104 families (79 simplex, 25 multiplex; 82.7% male); 88 of these pedigrees have cousin marriages.
 94
 ASD (based on DSM-IV-TR diagnoses when research scales not available in native language)
 
 
 0
 0
 1
 1
 pinto_10_ASD_discovery_cases
 Autism Genome Project (AGP) consortium patient cohort from families with at least two ASD individuals
 996
 ASD (ADI-R and ADOS): strict, broad, or spectrum ASD
 
 
 45454
 2
 0
 2
 poultney_13_ASD_discovery_cases
 ASD cases of European ancestry from AGRE retained after filtering (original cohort size of 432 cases)
 299
 Cases diagnosed with ASD
 N/A
 79.86% Male (before filtering)
 405808
 0
 3
 3
 prasad_12_ASD_discovery_cases
 Unrelated ASD cases recruited from three Canadian sites (Hospital for Sick Children, McMaster University, and Memorial University of Newfoundland); the majority of cases had been previously genotyped with results published in Marshall et al., 2008 and Pinto et al., 2010. 20 cases from initial cohort of 696 were excluded from further analysis (due to CNVs > 5 Mb).
 676
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS
 NA
 82.84% Male
 84741
 1
 2
 3
 sajan_13_ACC/CBLH/PMG_discovery_cases
 Individuals with severe congenital brain malformations [agenesis of the corpus callosum (ACC), cerebellar hypoplasia (CBLH), and/or polymicrogyria (PMG)] and additional neurodevelopmental phenotypes
 487
 Diagnosis of agenesis of the corpus callosum (ACC), cerebellar hypoplasia (CBLH), and/or polymicrogyria (PMG); additional diagnoses of autism spectrum disorder (ASD), developmental delay (DD), intellectual disability (ID) and/or seizures in some patients
 N/A
 N/A
 72246
 3
 0
 3
 sanders_11_ASD_discovery_cases
 Autistic probands from the Simons Simplex Collection (SSC). 872 probands in quartet families, 272 probands in trios.
 1124
 ASD diagnosis: 89.5% autism; 8.5% PDD-NOS, 2% Asperger syndrome. Mean full-scale IQ 85.1 1.5 (mean verbal IQ, 81.9 1.7; mean non-verbal IQ, 88.4 1.4)
 Mean, 9.1 yrs.
 86.1% Male
 9879
 3
 2
 5
 sato_12_ASD_discovery_cases_1
 Unrelated ASD cases from Canada (Hospital for Sick Children, McMaster University, Memorial University of Newfoundland, University of Alberta, and Montral Children's Hospital of McGill University Health Centre) and Europe (PARIS and specialized clincial centers in France, Sweden, Germany, Finland, and the UK).
 1614
 Diagnosis of ASD based on Autism Diagnostic Interview-Revised (ADI-R) and/or Autism Diagnostic Observation Schedule (ADOS). In some ASD cases from Sweden, the Diagnostic Interview for Social and Communication Disorders (DISCO-10) was applied instead of ADI-R.
 NA
 78.07% Male
 19618
 1
 0
 1

Controls

Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
 engchuan_15_ASD_discovery_controls
 Platform-matched controls from three large studies: SAGE (Study of Addiction Genetics and Environment), Ontario Colorectal Cancer study, and HABC (Health Aging and Body Composition)
 2342
 Controls; subjects had no previous psychiatric history
 N/A
 46.67% Male
 195758
 36
 7
 43
 griswold_12_ASD_discovery_controls
 Children recruited as pediatric controls from HIHG (Miami, FL) and preterm birth study at Centennial Medical Center (Nashville, TN)
 592
 Control
 Range, preterm-21 yrs.
 NA
 84111
 0
 0
 0
 krumm_13_ASD_discovery_controls
 Unaffected siblings of ASD probands from quad families ascertained as part of the Simons Simplex Collection (SSC); CNVs detected using data from four previously published exome sequencing studies (O'Roak et al., 2011; Iossifov et al., 2012; O'Roak et al., 2012; Sanders et al., 2012)
 411
 Control (unaffected siblings of ASD probands). Social Responsiveness Scale (SRS) used as a quantitative measure of social deficits
 N/A
 46.47% Male
 4811
 0
 1
 1
 marshall_08_ASD_discovery_controls_1
 German PopGen project and entries from Database of Genomic Variants
 500
 Controls
 
 
 0
 0
 0
 0
 marshall_08_ASD_discovery_controls_2
 Non-disease controls from Ontario population
 1152
 Controls
 
 
 0
 0
 0
 0
 poultney_13_ASD_discovery_controls
 Controls matched for European ancestry from NIMH and CEPH retained after filtering (original cohort size of 379 controls)
 260
 Control
 N/A
 47.49% Male (before filtering)
 347984
 0
 2
 2
 prasad_12_ASD_discovery_controls
 PDx controls [1000 DNA samples from reportedly healthy donors (50.2% male) from BioServe (Beltsville, MD)] and 4139 in-house controls previously reported in Krawcak et al. 2006, Stewart et al. 2009, and Bierut et al. 2010. CNVs identified in controls were used to define rare ASD-specific CNVs.
 5139
 Control
 NA
 NA (PDx controls 50.2% male)
 84741
 0
 0
 0
 sanders_11_ASD_discovery_controls
 Matched siblings of autistic probands from the Simons Simplex Collection (SSC).
 872
 Controls
 Mean, 10.0 yrs.
 
 9334
 1
 2
 3

Cases

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
 celestino-soper_11_ASD_discovery_cases
 
 aCGH
  Agilent 1M
 ADM-2
 Agilent Feature Extraction v10.7.3.1, Agilent DNA Analytics v4.0.76
 None
 digregorio_17_DD/ID_discovery_cases
  Italian
 aCGH
  Agilent 60K (SurePrint G3 Human CGH Microarray 8x60K)
 ADM-2
 Agilent CGH Analytics software ver. 4.0.81
 None
 engchuan_15_ASD_discovery_cases
  Caucasian
 Solid phase hybridization
  Illumina 1M
 
 
 None
 griswold_12_ASD_discovery_cases
  Range of self-reported ethnicities (specifics NA)
 Solid phase hybridization
  Illumina Human 1M-v1_C BeadChip, Illumina 1M-DuoV3 BeadChip
 Penn CNV, QuantiSNP
 BeadStudio
 qPCR
 krumm_13_ASD_discovery_cases
  N/A
 WES
  Whole exome sequencing platforms used in four recent publications (O'Roak et al., 2011; Sanders et al., 2012; O'Roak et al., 2012, and Iossifov et al., 2012)
 DNACopy, CGHCall
 CoNIFER
 None
 leyser_16_ASD/DD_discovery_cases
  Brazilian
 G-banded karyotyping
  High resolution G-banded chromosome analysis
 
 
 None
 maini_18_ASD/DD/ID_discovery_cases
  Italian
 aCGH, array SNP
  Multiple platforms, including Agilent and Affymetrix arrays (8x60K oligochips since 2012)
 
 
 None
 marshall_08_ASD_discovery_cases
  90% European, 4.5% European-mixed, 4.5% Asian, 0.07% African
 Array SNP, karotyping
  Affymetrix 500K
 dChip, CNAG, GEMCA
 
 qPCR, qmPCR
 morrow_08_ASD_discovery_cases
  Arabic Middle East, Turkey, and Pakistan
 Array SNP
  Affymetrix 500K
 BRLMM
 dChip
 
 pinto_10_ASD_discovery_cases
  European
 Solid phase hybridization
  Illumina Infinium 1M SNP microarray
 QuantiSNP, iPattern
 
 qPCR, long-range PCR (LR-PCR), MLPA, FISH, aCGH (Agilent 1M), array SNP (Affymetrix 500K)
 poultney_13_ASD_discovery_cases
  European
 WES
  Agilent SureSelect Human All Exon v.2
 XHMM
 
 None
 prasad_12_ASD_discovery_cases
  Canada
 aCGH
  Agilent 1M
 ADM-2, DNAcopy (R Bioconductor)
 DNA Analytics v4.0.85 (Agilent), DNAcopy
 None
 sajan_13_ACC/CBLH/PMG_discovery_cases
  81.31% Caucasian
 Solid phase hybridization
  Illumina InfiniumII HumanHap610
 PennCNV
 
 None (not tested or failure to confirm by qPCR)
 sanders_11_ASD_discovery_cases
  White non-Hispanic, 74.5%; mixed, 9.3%, Asian, 4.3%, White Hispanic, 4.0%, African-American, 3.8%; other, 4.2&
 Solid phase hybridization
  Illumina 1M v1, Illumina 1M v3
 PennCNV, QuantiSNP, GNOSIS
 
 
 sato_12_ASD_discovery_cases_1
  Canadian (n=1158) and European (n=456)
 aCGH, array SNP, solid phase hybridization
  Affymetrix 6.0, Illumina 1M, Agilent SurePrint G3 Human CGH 1X1M, Illumina Human 1M-Duo BeadChip
 DNA Analytics, CBS/DNAcopy, Birdsuite, iPattern, Genotyping Console, PennCNV, QuantiSNP, iPattern
 
 None

Controls

Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
  engchuan_15_ASD_discovery_controls
  Caucasian
  Solid phase hybridization
  Illumina 1M
 
 
  None
  griswold_12_ASD_discovery_controls
  Caucasian
  Solid phase hybridization
  Illumina Human 1M-v1_C BeadChip, Illumina 1M-DuoV3 BeadChip
  Penn CNV, QuantiSNP
  BeadStudio
 
  krumm_13_ASD_discovery_controls
  N/A
  WES
  Whole exome sequencing platforms used in four recent publications (O'Roak et al., 2011; Sanders et al., 2012; O'Roak et al., 2012, and Iossifov et al., 2012)
  DNACopy, CGHCall
  CoNIFER
  None
  marshall_08_ASD_discovery_controls_1
  European
  Array SNP, karotyping
  Affymetrix 500K
  dChip, CNAG, GEMCA
 
 
  marshall_08_ASD_discovery_controls_2
  European
  Array SNP, karotyping
  Affymetrix 500K
  dChip, CNAG, GEMCA
 
 
  poultney_13_ASD_discovery_controls
  European
  WES
  Agilent SureSelect Human All Exon v.2
  XHMM
 
  None
  prasad_12_ASD_discovery_controls
  NA
  aCGH
  Agilent 1M
  ADM-2, DNAcopy (R Bioconductor)
  DNA Analytics v4.0.85 (Agilent), DNAcopy
 
  sanders_11_ASD_discovery_controls
 
  Solid phase hybridization
  Illumina 1M v1 or Illumina 1M v3
  PennCNV, QuantiSNP, GNOSIS
 
 

Cases

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  celestino-soper_11_ASD_discovery_cases-11399
 NA
 M
 ASD
 NA
 NA
 11649996
 11650159
  164
 GRCh38
 Deletion
 No
  digregorio_17_DD/ID_discovery_cases-DECIPHER_300356
  NA NA
 N/A
 M
 Developmental delay/intellectual disability
 
 
 10090089
 10719598
  629510
 GRCh38
 Duplication
 No
  engchuan_15_ASD_discovery_cases-case13076_903
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case13079_933
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11341087
 11413332
  72246
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case13100_1173
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case13119_1364
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case13163_1803
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14078_1340
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14109_1970
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11404725
  50586
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14139_2370
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11362998
 11404725
  41728
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14143_2410
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case14185_3040
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case3018_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11404725
  50586
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case3026_4
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case3104_4
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case3120_4
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case4270_1
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11341087
 11422636
  81550
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case5032_4
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11367487
 11404725
  37239
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case5083_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11362998
 11394598
  31601
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case5283_4
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case5302_4
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case5394_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 10406893
 10452346
  45454
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case5424_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case6339_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11354140
 11391885
  37746
 GRCh38
 Deletion
 No
  engchuan_15_ASD_discovery_cases-case6357_3
 N/A
 N/A
 ASD
 Diagnosis of ASD based on Autism Diagnostic Observation Schedule (ADOS) and Autism Diagnostic Interview-Revised (ADI-R)
 
 11341087
 11413332
  72246
 GRCh38
 Deletion
 No
  griswold_12_ASD_discovery_cases-case37240
 NA
 NA
 ASD/autism
 NA
 NA
 10204175
 10288286
  84112
 GRCh38
 Deletion
 Yes
  krumm_13_ASD_discovery_cases-case12736.p1
 N/A
 M
 ASD
 ASD proband from SSC quad family 12736. SRS score of 85.
 Full-scale IQ (FSIQ) score of 101.
 10185329
 10190140
  4812
 GRCh38
 Duplication
 No (not tested)
  leyser_16_ASD/DD_discovery_cases-case1
 4 yrs.
 M
 ASD and developmental delay
 Diagnosis of ASD (according to DSM-5 criteria); overall CARS score of 44 (within severe range of ASD). Birth/neonatal history: born at term by vaginal delivery following uneventful pregnancy; mother consumed alcohol before becoming aware of pregnancy; mother had a small amount of vaginal bleeding at 42 weeks of gestation; Apgar scores of 8 and 8; mild asymptomic hypoglycemia due to suction difficulties; discharged from hospital at three days; able to breastfeed until 3 months of age only. Developmental milestones: presented with global developmental delay around 11 months of age; social and language skills below rest of developmental domains; independent walking at 23 months. Language and communication evalaution: poor verbal and non-verbal communication. Behavioral/psychiatric evaluation: poor eye contact; poor social interaction; significant motor and vocal stereotypic behaviors; difficulties in functional play and imitation. Epilepsy/seizures: none reported. EEG: signs of a non-specific slow background. Brain imaging: sparse increased signal in FLAIR and T2-weighted images in white matter territories adjacent to the lateral ventricle bodies and subcortical zones. Visual evaluation: refraction error visual impairment. Dysmorphic features: none reported. Growth parameters: weight 15th-25th %ile, height 15th-25th %ile, head circumference 75th %ile. Family history: parents were non-consanguineous and healthy.
 
 N/A
 N/A
  N/A
 Unknown
 Deletion
 No
  maini_18_ASD/DD/ID_discovery_cases-case_unknown16
  NA NA
 N/A
 N/A
 NDD/MCA/dysmorphic features
 CNV was identified in an individual with one or more neurodevelopmental disorders (NDD), multiple congenital anomalies (MCA), and/or dysmorphic features (detailed clinical information was not available). CNV classified as variant of unknown significance-likely benign (VOUS-LB)
 
 10704274
 11022630
  318357
 GRCh38
 Deletion
 No
  marshall_08_ASD_discovery_cases-SK0059-003
 NA
 M
 ASD
 NA
 NA
 10387216
 10401434
  14219
 GRCh38
 Duplication
 Yes
  morrow_08_ASD_discovery_cases-case3001
 NA
 
 ASD
 NA
 NA
 10295000
 10295000
  0
 Unknown
 Duplication
 No
  pinto_10_ASD_discovery_cases-case13046_553
 NA
 M
 Autism
 Verbal
 Normal IQ
 11407199
 11436086
  28887
 Unknown
 Deletion
 Yes
  pinto_10_ASD_discovery_cases-case5394_3
 NA
 M
 ASD
 NA
 NA
 10406893
 10452346
  45454
 GRCh38
 Deletion
 Yes
  poultney_13_ASD_discovery_cases-case99HI0694B
 N/A
 F
 ASD
 ASD case from AGRE (AGRE ID AU038203; NDAR ID NDAR_INVXX733FLA)
 
 9993141
 10073413
  80273
 GRCh38
 Duplication
 No
  poultney_13_ASD_discovery_cases-case99HI1144B
 N/A
 M
 ASD
 ASD case from AGRE (AGRE ID AU020404; NDAR ID NDAR_INVPN168CVH)
 
 9978964
 10126710
  147747
 GRCh38
 Duplication
 No
  poultney_13_ASD_discovery_cases-case99HI1144B
 N/A
 M
 ASD
 ASD case from AGRE (AGRE ID AU020404; NDAR ID NDAR_INVPN168CVH)
 
 12115293
 12521100
  405808
 GRCh38
 Duplication
 No
  prasad_12_ASD_discovery_cases-case143189
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. CNV identified by previous SNP microarray study
 
 10285606
 10296717
  11112
 Unknown
 Deletion
 No
  prasad_12_ASD_discovery_cases-case68711
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. CNV identified by previous SNP microarray study
 
 10429581
 10437561
  7981
 Unknown
 Duplication
 No
  prasad_12_ASD_discovery_cases-case83152L
 NA
 M
 ASD
 Diagnosis of ASD based on meeting criteria on ADI-R and/or ADOS. Novel CNV
 
 10152859
 10237599
  84741
 Unknown
 Duplication
 No
  sajan_13_ACC/CBLH/PMG_discovery_cases-case1004-0
 N/A
 N/A
 ACC
 Diagnosis of agenesis of the corpus callosum (ACC). ASD: unknown. Seizures: unknown.
 Developmental delay: unknown. Intellectual disability: yes.
 11341087
 11413332
  72246
 GRCh38
 Deletion
 No
  sajan_13_ACC/CBLH/PMG_discovery_cases-case1149-0
 N/A
 N/A
 ACC
 Diagnosis of agenesis of the corpus callosum (ACC). ASD: no. Seizures: yes.
 Developmental delay: yes. Intellectual disability: yes.
 11341087
 11413332
  72246
 GRCh38
 Deletion
 No
  sajan_13_ACC/CBLH/PMG_discovery_cases-case1343-0
 N/A
 N/A
 ACC-PMG
 Diagnosis of agenesis of the corpus callosum (ACC) and polymicrogyria (PMG). ASD: no. Seizures: no.
 Developmental delay: yes. Intellectual disability: unknown.
 11341087
 11413332
  72246
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11316.p1
 11.7
 F
 Autism
 NA
 Full-scale IQ, 47; non-verbal IQ, 45; verbal IQ, 21
 12100657
 12101916
  1260
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11556.p1
 9.7
 M
 Autism
 NA
 Full-scale IQ, 102; non-verbal IQ, 102; verbal IQ, 108
 12380050
 12388935
  8886
 GRCh38
 Deletion
 No
  sanders_11_ASD_discovery_cases-11818.p1
 12.1
 M
 Autism
 NA
 Full-scale IQ, 40; non-verbal IQ, 44; verbal IQ, 30
 11304779
 11314658
  9880
 GRCh38
 Duplication
 No
  sanders_11_ASD_discovery_cases-11989.p1
 9.6
 M
 Autism
 NA
 Full-scale IQ, 89; non-verbal IQ, 94; verbal IQ, 83
 11288636
 11293445
  4810
 GRCh38
 Duplication
 No
  sanders_11_ASD_discovery_cases-12499.p1
 6.9
 M
 Autism
 NA
 Full-scale IQ, 60; non-verbal IQ, 67; verbal IQ, 56
 12380050
 12388935
  8886
 GRCh38
 Deletion
 No
  sato_12_ASD_discovery_cases_1-family1caseIII-5
 32 yrs.
 M
 Asperger
 Diagnosis of Asperger disorder based on ADI-R and ADOS-4 at 25 years; initial diagnosis of PDD-NOS at 16 years (impairment in social communication, not enough repetitive stereotyped behaviors for diagnosis of autism or Asperger). Developmental milestones: engaged in repetitive paly and speech at 12-24 months; single words at 24 months, phrases by 36 months; no lost langauge or loss in other skills. Language and communication evaluation: normal language development; no history of echolalia, pronoun reversal, or neologisms. Behavioral/psychiatric evaluation: anxiety disorder (currently takes olanzapine and paroxetine); poor eye contact, persistent lack of social smile, facial affect, joint attention, and empathy. Additional genetic evaluation: nonsense mutation in PCDHGA11 gene that segregates with SHANK1 deletion. Family history: mother exhibited anxiety and shyness, but not considered to have ASD or BAP; sister with diagnosis of anxiety disorder and a generalized anxiety disorder (no evidence of ASD or BAP); sister has two children with ASD/Asperger; maternal grandfather with BAP.
 Leiter-R brief non-verbal IQ of 83 (13th %ile, low average range). Adaptive behavior scores (as measured by Vineland Adaptive Behavior Scales/VABS-I): adaptive behavior composite score of 52 (<1st %ile); communication score of 43 (<1st %ile); daily living skills score of 63 (1st %ile); socialization score of 65 (1st %ile).
 11077138
 11096755
  19618
 GRCh38
 Deletion
 No

Controls

Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
  engchuan_15_ASD_discovery_controls-controlB140638_1007853950
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11404725
  50586
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlB178414_0057061570
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11362998
  11404725
  41728
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB201461_1007854130
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10408358
  10451071
  42714
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB212877_1007875368
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10408358
  10451071
  42714
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB225642_1007841224
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10407992
  10451071
  43080
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB268107_1007853890
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB275066_1007872201
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10408358
  10451071
  42714
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB294025_1007842040
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10407992
  10451071
  43080
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB295382_1007853936
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10836722
  10921169
  84448
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlB317750_1007842099
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10407992
  10451071
  43080
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB322838_1007872284
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11328123
  11404725
  76603
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB347545_0067942603
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10408358
  10451071
  42714
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB357802_1007874407
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10407992
  10451071
  43080
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB387047_1007874371
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11362998
  11404725
  41728
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB395936_1007853800
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11367487
  11404725
  37239
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlB401529_1007854734
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB456798_1007854143
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10408358
  10452346
  43989
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB458066_1007853853
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB467864_1007874035
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB472391_1007854029
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlB487470_1007873444
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11304779
  11342773
  37995
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB528818_1007853876
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB529296_1007840921
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB549441_1007854309
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB561892_1007853627
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10408358
  10451071
  42714
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB582969_1007853926
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11362998
  11404725
  41728
  GRCh38
  Homozygous deletion
  No
  engchuan_15_ASD_discovery_controls-controlB626857_1007872217
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11362998
  11404725
  41728
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB659155_1007854741
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB719465_1007853907
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB733220_1007853759
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB778845_1007854001
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11367487
  11404725
  37239
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlB782997_1007853703
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10408358
  10451071
  42714
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB792739_1007854317
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB810722_1007874889
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11341087
  11413332
  72246
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB818627_1007854359
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11354140
  11391885
  37746
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB826285_0067942629
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10408358
  10451071
  42714
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB829591_1007854754
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11362998
  11558756
  195759
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlB839667_1007852937
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11362998
  11413332
  50335
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB887823_1007874701
  N/A
  N/A
  Control
  No previous psychiatric history
 
  10408358
  10451071
  42714
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlB986243_1007853916
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11362998
  11404725
  41728
  GRCh38
  Duplication
  No
  engchuan_15_ASD_discovery_controls-controlHABC_901220_901220
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11265934
  11304779
  38846
  GRCh38
  Deletion
  No
  engchuan_15_ASD_discovery_controls-controlHABC_902479_902479
  N/A
  N/A
  Control
  No previous psychiatric history
 
  11035541
  11066832
  31292
  GRCh38
  Deletion
  No
  krumm_13_ASD_discovery_controls-control12736.s1
  N/A
  F
  Control
  Unaffected sibling from SSC quad family 12736. SRS score of 53.
 
  10185329
  10190140
  4812
  GRCh38
  Duplication
  No (not tested)
  poultney_13_ASD_discovery_controls-control04C28851A
  N/A
  M
  Control
  NIMH Control (NIMH ID 46341)
 
  10407651
  10449390
  41740
  GRCh38
  Duplication
  No
  poultney_13_ASD_discovery_controls-control05C44621
  N/A
  M
  Control
  NIMH Control (NIMH ID 39000)
 
  11839138
  12187121
  347984
  GRCh38
  Duplication
  No
  sanders_11_ASD_discovery_controls-11184.s1
  8.1
  F
  Control (matched sibling)
  NA
  NA
  12380050
  12388935
  8886
  GRCh38
  Deletion
  No
  sanders_11_ASD_discovery_controls-13001.s1
  7.4
  M
  Control (matched sibling)
  NA
  NA
  10384670
  10394004
  9335
  GRCh38
  Duplication
  No
  sanders_11_ASD_discovery_controls-13018.s1
  7.9
  M
  Control (matched sibling)
  NA
  NA
  10384670
  10394004
  9335
  GRCh38
  Duplication
  No

Cases

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
 celestino-soper_11_ASD_discovery_cases-11399
 
 
 Unknown
 Simplex
 NA
 ETV6
 
 digregorio_17_DD/ID_discovery_cases-DECIPHER_300356
 
 
 Unknown
 
 
 HNRNPABP1,OLR1,GABARAPL1,LINC02598,KLRC4,LINC02446,KLRA1P,MAGOHB,CLEC7A,TMEM52B,KLRD1,KLRK1,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1,EIF2S3B,SLC25A39P2,STYK1,YBX3,CLEC1A
 
 engchuan_15_ASD_discovery_cases-case13076_903
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case13079_933
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case13100_1173
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case13119_1364
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case13163_1803
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case14078_1340
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case14109_1970
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case14139_2370
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case14143_2410
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case14185_3040
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case3018_3
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case3026_4
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case3104_4
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case3120_4
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case4270_1
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case5032_4
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case5083_3
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case5283_4
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case5302_4
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case5394_3
 
 
 Unknown
 
 
 KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
 engchuan_15_ASD_discovery_cases-case5424_3
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case6339_3
 
 
 Unknown
 
 
 PRB1,PRB2
 
 engchuan_15_ASD_discovery_cases-case6357_3
 
 
 Unknown
 
 
 PRB1,PRB2
 
 griswold_12_ASD_discovery_cases-case37240
 qPCR
 
 Paternal
 Simplex
 Not segregated
 GABARAPL1,KLRD1
 
 krumm_13_ASD_discovery_cases-case12736.p1
 
 
 Maternal
 Simplex
 Not segregated
 TMEM52B
 
 leyser_16_ASD/DD_discovery_cases-case1
 
 
 De novo
 
 Likely segregated
 CNV gene content N/A due to lack of defined start and end points
 
 maini_18_ASD/DD/ID_discovery_cases-case_unknown16
 
 
 Unknown
 Unknown
 Unknown
 HSPE1P12,TAS2R7,TAS2R8,TAS2R9,TAS2R10,TAS2R13,PRH2,TAS2R15P,TAS2R50,TAS2R20,TAS2R19,YBX3,LINC02366,PRR4,PRH1,PRH1-PRR4,TAS2R14
 
 marshall_08_ASD_discovery_cases-SK0059-003
 qPCR, qmPCR
 
 Unknown
 NA
 NA
 KLRK1,KLRC4-KLRK1
 
 morrow_08_ASD_discovery_cases-case3001
 
 
 Unknown
 NA
 NA
 KLRD1
 
 pinto_10_ASD_discovery_cases-case13046_553
 qPCR
 
 De novo
 N/A
 NA
 PRB2 exonic
 
 pinto_10_ASD_discovery_cases-case5394_3
 Agilent1M
 
 paternal
 NA
 NA
 KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
 poultney_13_ASD_discovery_cases-case99HI0694B
 
 
 Unknown
 Unknown (likely multiplex/AGRE)
 Unknown
 CLEC12B,CLEC1B,CLEC9A,CLEC12A,CLEC1A
 
 poultney_13_ASD_discovery_cases-case99HI1144B
 
 
 Unknown
 Unknown (likely multiplex/AGRE)
 Unknown
 CLEC12B,RN7SKP161,HNRNPABP1,CLEC1B,CLEC9A,CLEC7A,CLEC12A,CLEC1A
 
 poultney_13_ASD_discovery_cases-case99HI1144B
 
 
 Unknown
 Unknown (likely multiplex/AGRE)
 Unknown
 RNU6-545P,RNU6-318P,RPL23AP66,LOH12CR2,MANSC1,DUSP16,BCL2L14,LRP6,BORCS5
 
 prasad_12_ASD_discovery_cases-case143189
 
 
 Unknown
 Unknown
 Unknown
 0 genes
 
 prasad_12_ASD_discovery_cases-case68711
 
 
 Unknown
 Unknown
 Unknown
 KLRK1,KLRC4-KLRK1
 
 prasad_12_ASD_discovery_cases-case83152L
 
 
 Unknown
 Unknown
 Unknown
 C12orf59,OLR1,CLEC7A
 
 sajan_13_ACC/CBLH/PMG_discovery_cases-case1004-0
 Not tested by qPCR
 
 Unknown
 Unknown
 Unknown
 PRB1,PRB2
 
 sajan_13_ACC/CBLH/PMG_discovery_cases-case1149-0
 Not tested by qPCR
 
 Unknown
 Unknown
 Unknown
 PRB1,PRB2
 
 sajan_13_ACC/CBLH/PMG_discovery_cases-case1343-0
 Not tested by qPCR
 
 Unknown
 Unknown
 Unknown
 PRB1,PRB2
 
 sanders_11_ASD_discovery_cases-11316.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Segregated
 BCL2L14
 
 sanders_11_ASD_discovery_cases-11556.p1
 
 
 Paternal
 Simplex (quad-proband matched)
 Not segregated
 BORCS5
 
 sanders_11_ASD_discovery_cases-11818.p1
 
 
 Maternal
 Simplex (quad-proband matched)
 Segregated
 PRB4
 
 sanders_11_ASD_discovery_cases-11989.p1
 
 
 Both parents
 Simplex (quad-proband matched)
 Segregated
 
 
 sanders_11_ASD_discovery_cases-12499.p1
 
 
 Both parents
 Simplex (quad-proband matched)
 Not segregated
 BORCS5
 
 sato_12_ASD_discovery_cases_1-family1caseIII-5
 
 Possibly maternal
 Unknown
 Simplex for ASD; multiplex for anxiety disorder
 Unknown
 TAS2R64P,TAS2R43,PRH1,PRH1-PRR4,TAS2R14
 

Controls

Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
engchuan_15_ASD_discovery_controls-controlB140638_1007853950
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB178414_0057061570
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB201461_1007854130
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB212877_1007875368
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB225642_1007841224
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB268107_1007853890
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB275066_1007872201
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB294025_1007842040
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB295382_1007853936
 
 
  Unknown
 
 
  TAS2R13,PRR4,PRH1,PRH1-PRR4
 
engchuan_15_ASD_discovery_controls-controlB317750_1007842099
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB322838_1007872284
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB347545_0067942603
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB357802_1007874407
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB387047_1007874371
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB395936_1007853800
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB401529_1007854734
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB456798_1007854143
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB458066_1007853853
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB467864_1007874035
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB472391_1007854029
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB487470_1007873444
 
 
  Unknown
 
 
  PRB4
 
engchuan_15_ASD_discovery_controls-controlB528818_1007853876
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB529296_1007840921
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB549441_1007854309
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB561892_1007853627
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB582969_1007853926
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB626857_1007872217
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB659155_1007854741
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB719465_1007853907
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB733220_1007853759
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB778845_1007854001
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB782997_1007853703
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB792739_1007854317
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB810722_1007874889
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB818627_1007854359
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB826285_0067942629
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB829591_1007854754
 
 
  Unknown
 
 
  HIGD1AP8,DDX55P1,RNU7-60P,PRB1,LINC01252,PRB2
 
engchuan_15_ASD_discovery_controls-controlB839667_1007852937
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlB887823_1007874701
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
engchuan_15_ASD_discovery_controls-controlB986243_1007853916
 
 
  Unknown
 
 
  PRB1,PRB2
 
engchuan_15_ASD_discovery_controls-controlHABC_901220_901220
 
 
  Unknown
 
 
  PRB3
 
engchuan_15_ASD_discovery_controls-controlHABC_902479_902479
 
 
  Unknown
 
 
  TAS2R63P,TAS2R46,PRH1,PRH1-PRR4,TAS2R14
 
krumm_13_ASD_discovery_controls-control12736.s1
 
 
  Maternal
  Simplex
 
  TMEM52B
 
poultney_13_ASD_discovery_controls-control04C28851A
 
 
  Unknown
 
 
  KLRC4,KLRC4-KLRK1,KLRC3,KLRC2,KLRC1
 
poultney_13_ASD_discovery_controls-control05C44621
 
 
  Unknown
 
 
  MIR1244-4,ETV6,BCL2L14,LRP6
 
sanders_11_ASD_discovery_controls-11184.s1
 
 
  Both parents
  Simplex (quad)
  NA
  BORCS5
 
sanders_11_ASD_discovery_controls-13001.s1
 
 
  Maternal
  Simplex (quad)
  NA
  KLRK1,KLRC4-KLRK1
 
sanders_11_ASD_discovery_controls-13018.s1
 
 
  Paternal
  Simplex (quad)
  NA
  KLRK1,KLRC4-KLRK1
 

No Animal Model Data Available
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