10p11.23-p11.22CNV Type: Deletion
Largest CNV size: 348392 bp
Statistics Box:
Number of Reports: 2
Number of Reports: 2
Summary Information
Summary statement in development
Additional Locus Information
References
Major Reports
Title
Author, Year
Report Class
CNV Type
Structural variation of chromosomes in autism spectrum disorder.
Deletion
Agenesis of the corpus callosum, developmental delay, autism spectrum disorder, facial dysmorphism, and posterior polymorphous corneal dystrophy as...
Deletion
Minor Reports
Title
Author, Year
Report Class
CNV Type
No Minor Reports
Cases
Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
chaudhry_17_ASD/ADHD/DD_discovery_cases
Female patient born to healthy and non-consanguineous parents presenting with a de novo 10p11.23-p11.22 deletion
1
Case diagnosed with autism spectrum disorder (ASD), attention deficit hyperactivity disorder (ADHD), and learning disability at age of 10 years; case also presented with agenesis of the corpus callosum with cerebral ventriculomegaly, developmental delay (primarily motor delay), dysmorphic features, and a diagnosis of posterior polymorphous corneal dystrophy (PPCD)
13.5 years
Female
2050000
1
0
1
marshall_08_ASD_discovery_cases
Cohort of ASD families (237 simplex, 189 mulitplex) recruited from the Hospital for Sick Children, McMaster Univ., Memorial Univ., and other sites
427
ASD
348392
1
0
1
Controls
Cohort ID
Author, Year
Descripton
Cohort Size
Diagnosis
Age
Gender
CNV Size
Deletion
Duplication
Total CNV's
marshall_08_ASD_discovery_controls_1
German PopGen project and entries from Database of Genomic Variants
500
Controls
0
0
0
0
marshall_08_ASD_discovery_controls_2
Non-disease controls from Ontario population
1152
Controls
0
0
0
0
Cases
Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
chaudhry_17_ASD/ADHD/DD_discovery_cases
French-Canadian/Italian descent
aCGH
OGT 4x180 K ISCA
FISH
marshall_08_ASD_discovery_cases
90% European, 4.5% European-mixed, 4.5% Asian, 0.07% African
Array SNP, karotyping
Affymetrix 500K
dChip, CNAG, GEMCA
qPCR, qmPCR
Controls
Cohort ID
Geographical Ancestry
Discovery Method
Platform
Algorithm
Software
Validation Method
marshall_08_ASD_discovery_controls_1
European
Array SNP, karotyping
Affymetrix 500K
dChip, CNAG, GEMCA
marshall_08_ASD_discovery_controls_2
European
Array SNP, karotyping
Affymetrix 500K
dChip, CNAG, GEMCA
Cases
Patient ID
Author, Year
Age
Gender
Primary Diagnosis
Clinical Profile
Cognitive Profile
CNV Start
CNV End
CNV Size
Genome Build
Type Method
Validation
chaudhry_17_ASD/ADHD/DD_discovery_cases-case1
13.5 yrs.
F
ASD, ADHD, motor delay, and learning disability
Case diagnosed with autism spectrum disorder (ASD) and attention deficit hyperactivity disorder (ADHD) at 10 years of age. Birth/neonatal history: fetal ultrasound at 33 weeks gestation showed agenesis of the corpus callosum with cerebral ventriculomegaly (confirmed by fetal MRI at 34 weeks gestation); born at 40 weeks via vaginal delivery, uneventful postnatal course (discharged at 48 hr of life); hospitalized at 3 months of age for chest infection and was found to have positional plagiocephaly with the left occiput being more prominent than the right. Developmental milestones: developmental difficulties noted in early childhood mainly involving the motor domain; fine motor delay; difficulty catching smaller objects and inability to pedal or balance on one foot noted at 3.5 years. Language and communication evaluation: normal speech and language skills on formal testing, but language skills broke down in social language situations; delayed play skills and preference for solitary play and one-to-one adult interaction. Motor and musculoskeletal evaluation: mild difficulties with gross motor skills and fine motor skills at 4 years of age (age-appropriate visual motor integration but motor planning difficulties); long fingers, subluxation of 1st metacarpophalangeal joint, bilateral 5th finger clinodactyly, left-sided sandal gap, partial 2nd and 3rd toe syndactyly, mild lordosis, and thoracic scoliosis convex to the right side noted at 13.5 years of age. Behavioral/psychiatric evaluation: referred to psychiatry for assessment due to increasing aggressive and impulsive behavior, especially towards younger siblings. Ophthalmological evaluation: initiation eye examination was normal; repeat eye examination following the finding of ZEB1 gene deletion confirmed diagnosis of posterior polymorphous corneal dystrophy (PPCD). Additional medical history: recurrent urinary tract infections and bilateral vesicoureteric reflux observed in second to third years of life; small umbilical hernia noted at 5 years of age. Dysmorphic features: puffy eyelids, epicanthic folds, and bulbous nose noted at 3 months of age; high forehead, frontal bossing, hypertelorism, prominent eyes, droopy eyelids, and squared-shaped nose noted at 3.5 years; high forehead, frontal bossing, facial asymmetry, mild ptosis, hypertelorism, widely spaced teeth, prognathism, and low-set ears noted at 5 years; high forehead, frontal bossing, coarse facial features, prominent supraorbital ridges, deep set eyes, droopy eyelids, hypertelorism, flat nasal bridge, anteverted nostrils, malar hypoplasia, full lips, and prominent square shaped chin noted at 13.5 years of age. Growth parameters: height of 109.5 cm (97th %ile), weight of 23 kg (> 97th %ile), and head circumference of 51.5 cm (50th-98th %ile) at 5 years of age; height of 160 cm (50th-75th %ile) and head circumference of 55.4 cm (+1.5 SD) at 13.5 years of age. Family history: born to 22-year-old primigravida mother of French Canadian origin and 28-year old father of Italian descent (parents were healthy and non-consanguineous).
Case diagnosed with learning disability at 10 years of age. Assessment at age of 5 years demonstrated that this case appeared to be functioning at least 1 year behind chronological age.
30533471
32583222
2049752
GRCh38
Deletion
Yes
marshall_08_ASD_discovery_cases-MM1086-004
NA
M
ASD
NA
NA
30927183
31275574
348392
GRCh38
Deletion
Yes
Controls
No Control Data Available
Cases
Patient ID
Validation Description
Primary Disorder Inheritence
Inheritence
Family Profile
Disease Segregation
Gene Content
Altered Gene Expression
chaudhry_17_ASD/ADHD/DD_discovery_cases-case1
FISH
De novo
Likely segregated
RN7SL63P,DDX10P1,RNA5SP309,SPTLC1P1,HMGB1P7,RPL34P19,RN7SL825P,RPS4XP11,RNU7-22P,PPIAP31,RPS24P13,RNU6-1244P,C1DP1,LYZL2,ZEB1-AS1,KIF5B,SVIL2P,ZNF438,ARHGAP12,EPC1,ZEB1,CCDC7
marshall_08_ASD_discovery_cases-MM1086-004
qPCR, qmPCR
Unknown
NA
NA
RNA5SP309,ZEB1-AS1,ZNF438
Controls
No Control Data Available
No Animal Model Data Available